Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP13_T7_F07
         (775 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z35639-8|CAI46560.1|  634|Caenorhabditis elegans Hypothetical pr...    28   8.5  
Z35639-7|CAA84697.3|  959|Caenorhabditis elegans Hypothetical pr...    28   8.5  
AY571963-1|AAS78587.1|  959|Caenorhabditis elegans ATX-2 protein.      28   8.5  
AF077545-1|AAC26306.2|  506|Caenorhabditis elegans Hypothetical ...    28   8.5  

>Z35639-8|CAI46560.1|  634|Caenorhabditis elegans Hypothetical
           protein D2045.1b protein.
          Length = 634

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = -2

Query: 663 GNQGSIXGEGA*EPATTSKEGSRRANYPLPARGGSDEK*RYGTLYE 526
           G  G + G GA  P T +++ +++   P  A GG + + R G   E
Sbjct: 264 GVPGQMYGPGAATPVTVAQQPNQQHQVPTSAAGGQNHQLRDGEYRE 309


>Z35639-7|CAA84697.3|  959|Caenorhabditis elegans Hypothetical
           protein D2045.1a protein.
          Length = 959

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = -2

Query: 663 GNQGSIXGEGA*EPATTSKEGSRRANYPLPARGGSDEK*RYGTLYE 526
           G  G + G GA  P T +++ +++   P  A GG + + R G   E
Sbjct: 589 GVPGQMYGPGAATPVTVAQQPNQQHQVPTSAAGGQNHQLRDGEYRE 634


>AY571963-1|AAS78587.1|  959|Caenorhabditis elegans ATX-2 protein.
          Length = 959

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = -2

Query: 663 GNQGSIXGEGA*EPATTSKEGSRRANYPLPARGGSDEK*RYGTLYE 526
           G  G + G GA  P T +++ +++   P  A GG + + R G   E
Sbjct: 589 GVPGQMYGPGAATPVTVAQQPNQQHQVPTSAAGGQNHQLRDGEYRE 634


>AF077545-1|AAC26306.2|  506|Caenorhabditis elegans Hypothetical
           protein H41C03.3 protein.
          Length = 506

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 14/40 (35%), Positives = 16/40 (40%)
 Frame = +3

Query: 327 CSANVSVSPRMRCTDSAAHKCNYELFNRNNFSIRYWSWNY 446
           C  NV + P     DSA H  N   +N     I    WNY
Sbjct: 211 CLPNVLLLPDEESVDSAGHNINLAHYNCLRVLINKPGWNY 250


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,185,083
Number of Sequences: 27780
Number of extensions: 328868
Number of successful extensions: 719
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 713
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)