Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_T7_F04
(802 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p pro... 352 3e-97
AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal pr... 352 3e-97
AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE... 352 3e-97
AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB... 352 3e-97
AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA... 352 3e-97
>BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p
protein.
Length = 465
Score = 352 bits (866), Expect = 3e-97
Identities = 163/198 (82%), Positives = 174/198 (87%)
Frame = -3
Query: 689 EPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRV 510
+PI V +VF QDEMIDC+ TSRWHTKKLPRKTHKGLRKVACIGAWHPSRV
Sbjct: 214 KPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRV 273
Query: 509 SFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPH 330
S TVARAGQKGYHHRTE+NKKIYRIG GIH KDGKVIKNNASTEYDL++KSITPMGGFPH
Sbjct: 274 STTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPH 333
Query: 329 YGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTP 150
YGEVNNDFVMIKGCC+G KKRIITLRKSL HTKR+ALE+I LKFIDTSSK GHGRFQTP
Sbjct: 334 YGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTP 393
Query: 149 ADKAAFMGTLKKDRIREE 96
ADK AFMG LKKDR++EE
Sbjct: 394 ADKLAFMGPLKKDRLKEE 411
Score = 63.3 bits (147), Expect = 4e-10
Identities = 26/36 (72%), Positives = 32/36 (88%)
Frame = -1
Query: 796 QMKXLKQGQKRAHIMEIQXNGGTIEDKVKWAREHXE 689
Q++ +KQ QK+AH+MEIQ NGG+IEDKVKWAREH E
Sbjct: 178 QIRLIKQRQKKAHVMEIQLNGGSIEDKVKWAREHLE 213
>AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal
protein L3 protein.
Length = 416
Score = 352 bits (866), Expect = 3e-97
Identities = 163/198 (82%), Positives = 174/198 (87%)
Frame = -3
Query: 689 EPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRV 510
+PI V +VF QDEMIDC+ TSRWHTKKLPRKTHKGLRKVACIGAWHPSRV
Sbjct: 203 KPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRV 262
Query: 509 SFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPH 330
S TVARAGQKGYHHRTE+NKKIYRIG GIH KDGKVIKNNASTEYDL++KSITPMGGFPH
Sbjct: 263 STTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPH 322
Query: 329 YGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTP 150
YGEVNNDFVMIKGCC+G KKRIITLRKSL HTKR+ALE+I LKFIDTSSK GHGRFQTP
Sbjct: 323 YGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTP 382
Query: 149 ADKAAFMGTLKKDRIREE 96
ADK AFMG LKKDR++EE
Sbjct: 383 ADKLAFMGPLKKDRLKEE 400
Score = 63.3 bits (147), Expect = 4e-10
Identities = 26/36 (72%), Positives = 32/36 (88%)
Frame = -1
Query: 796 QMKXLKQGQKRAHIMEIQXNGGTIEDKVKWAREHXE 689
Q++ +KQ QK+AH+MEIQ NGG+IEDKVKWAREH E
Sbjct: 167 QIRLIKQRQKKAHVMEIQLNGGSIEDKVKWAREHLE 202
>AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE,
isoform E protein.
Length = 403
Score = 352 bits (866), Expect = 3e-97
Identities = 163/198 (82%), Positives = 174/198 (87%)
Frame = -3
Query: 689 EPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRV 510
+PI V +VF QDEMIDC+ TSRWHTKKLPRKTHKGLRKVACIGAWHPSRV
Sbjct: 190 KPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRV 249
Query: 509 SFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPH 330
S TVARAGQKGYHHRTE+NKKIYRIG GIH KDGKVIKNNASTEYDL++KSITPMGGFPH
Sbjct: 250 STTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPH 309
Query: 329 YGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTP 150
YGEVNNDFVMIKGCC+G KKRIITLRKSL HTKR+ALE+I LKFIDTSSK GHGRFQTP
Sbjct: 310 YGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTP 369
Query: 149 ADKAAFMGTLKKDRIREE 96
ADK AFMG LKKDR++EE
Sbjct: 370 ADKLAFMGPLKKDRLKEE 387
Score = 63.3 bits (147), Expect = 4e-10
Identities = 26/36 (72%), Positives = 32/36 (88%)
Frame = -1
Query: 796 QMKXLKQGQKRAHIMEIQXNGGTIEDKVKWAREHXE 689
Q++ +KQ QK+AH+MEIQ NGG+IEDKVKWAREH E
Sbjct: 154 QIRLIKQRQKKAHVMEIQLNGGSIEDKVKWAREHLE 189
>AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB,
isoform B protein.
Length = 403
Score = 352 bits (866), Expect = 3e-97
Identities = 163/198 (82%), Positives = 174/198 (87%)
Frame = -3
Query: 689 EPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRV 510
+PI V +VF QDEMIDC+ TSRWHTKKLPRKTHKGLRKVACIGAWHPSRV
Sbjct: 190 KPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRV 249
Query: 509 SFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPH 330
S TVARAGQKGYHHRTE+NKKIYRIG GIH KDGKVIKNNASTEYDL++KSITPMGGFPH
Sbjct: 250 STTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPH 309
Query: 329 YGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTP 150
YGEVNNDFVMIKGCC+G KKRIITLRKSL HTKR+ALE+I LKFIDTSSK GHGRFQTP
Sbjct: 310 YGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTP 369
Query: 149 ADKAAFMGTLKKDRIREE 96
ADK AFMG LKKDR++EE
Sbjct: 370 ADKLAFMGPLKKDRLKEE 387
Score = 63.3 bits (147), Expect = 4e-10
Identities = 26/36 (72%), Positives = 32/36 (88%)
Frame = -1
Query: 796 QMKXLKQGQKRAHIMEIQXNGGTIEDKVKWAREHXE 689
Q++ +KQ QK+AH+MEIQ NGG+IEDKVKWAREH E
Sbjct: 154 QIRLIKQRQKKAHVMEIQLNGGSIEDKVKWAREHLE 189
>AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA,
isoform A protein.
Length = 416
Score = 352 bits (866), Expect = 3e-97
Identities = 163/198 (82%), Positives = 174/198 (87%)
Frame = -3
Query: 689 EPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRV 510
+PI V +VF QDEMIDC+ TSRWHTKKLPRKTHKGLRKVACIGAWHPSRV
Sbjct: 203 KPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRV 262
Query: 509 SFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPH 330
S TVARAGQKGYHHRTE+NKKIYRIG GIH KDGKVIKNNASTEYDL++KSITPMGGFPH
Sbjct: 263 STTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPH 322
Query: 329 YGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTP 150
YGEVNNDFVMIKGCC+G KKRIITLRKSL HTKR+ALE+I LKFIDTSSK GHGRFQTP
Sbjct: 323 YGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTP 382
Query: 149 ADKAAFMGTLKKDRIREE 96
ADK AFMG LKKDR++EE
Sbjct: 383 ADKLAFMGPLKKDRLKEE 400
Score = 63.3 bits (147), Expect = 4e-10
Identities = 26/36 (72%), Positives = 32/36 (88%)
Frame = -1
Query: 796 QMKXLKQGQKRAHIMEIQXNGGTIEDKVKWAREHXE 689
Q++ +KQ QK+AH+MEIQ NGG+IEDKVKWAREH E
Sbjct: 167 QIRLIKQRQKKAHVMEIQLNGGSIEDKVKWAREHLE 202
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,689,883
Number of Sequences: 53049
Number of extensions: 765298
Number of successful extensions: 2231
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2231
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3736869864
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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