Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP13_T7_E21
         (782 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    24   1.4  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    24   1.8  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          22   7.4  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   9.8  

>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -2

Query: 352 CNDSPAEATSPENGW 308
           C D P E   PE+GW
Sbjct: 642 CRDIPEEFLRPESGW 656


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +1

Query: 634 DCFKILYRRQLSXGNFGRNQLLXGRLVFRPIPV 732
           DC KI+   +++   F R  +L   LV R +PV
Sbjct: 118 DCSKIVSAFKIAIDKFDRLWVLDSGLVNRTVPV 150


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = +3

Query: 153 ICTDGGSKRAHAQTLLRSPSRTSYSLRLNDTKLKI*HH 266
           +C    S+       L SP R   + R+N TKLK  HH
Sbjct: 120 LCEVPESRDGPPSVSLSSPPREPGTPRINFTKLKR-HH 156


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -1

Query: 293 AYTLPLPARVMLNF 252
           ++ +PLP RV+ NF
Sbjct: 222 SFCIPLPVRVLPNF 235


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,940
Number of Sequences: 438
Number of extensions: 4583
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24639531
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)