Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_T7_E19
(803 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0063 + 6481568-6481570,6481922-6482470 33 0.20
05_06_0281 + 26912419-26913099 32 0.46
11_07_0002 - 27171791-27172222 32 0.61
09_02_0279 + 6702517-6702948 32 0.61
06_03_0447 + 20878444-20878821 31 0.81
01_01_0386 - 2985563-2985986,2986301-2986390,2986529-2986668,298... 31 1.1
02_01_0302 - 2021221-2023305 31 1.4
11_08_0092 - 28307180-28307380,28307471-28307936,28308008-283081... 30 2.5
09_04_0156 - 15190502-15190903,15191149-15191154,15191512-15192351 26 3.1
06_01_0738 + 5458182-5458374,5460512-5461766,5461861-5462053,546... 29 3.3
04_03_0849 + 20265511-20265984,20266452-20266617,20266694-202669... 29 3.3
11_01_0763 + 6402901-6403971,6404581-6404826 29 4.3
09_01_0043 + 790859-790873,791410-791603,792521-792605,792719-79... 29 4.3
07_03_1389 + 26212117-26212119,26212721-26212875,26213402-262134... 29 4.3
07_03_0369 - 17356806-17356934,17357145-17357278,17357989-173582... 29 4.3
03_02_0234 + 6625417-6626184,6626314-6626339,6626435-6626531,662... 29 4.3
08_02_0819 - 21529913-21530064,21531016-21531082,21531284-215313... 29 5.7
07_03_0111 + 13535912-13535972,13536081-13536142,13536418-135365... 29 5.7
05_03_0634 + 16432679-16433076,16433358-16433610,16433993-164342... 29 5.7
02_01_0468 + 3357043-3357226,3357695-3358155 29 5.7
11_01_0625 + 5030571-5031016,5031333-5031627 28 7.6
06_01_0808 + 6097751-6097913,6098298-6098731 28 7.6
02_01_0289 - 1937125-1937385,1937570-1937611 28 7.6
11_06_0610 - 25449085-25453284 28 10.0
09_04_0629 - 19098087-19098516,19099120-19099370 28 10.0
08_02_0783 - 21166491-21166892,21167139-21167251,21168127-211682... 28 10.0
08_01_1025 + 10361064-10361237,10361807-10361877,10362001-103622... 28 10.0
03_06_0199 + 32310272-32311432 28 10.0
03_02_0539 - 9329572-9330729,9330988-9331041 28 10.0
02_05_0077 + 25645730-25645993,25647172-25647648,25648027-256482... 28 10.0
02_02_0431 - 10152228-10152352,10152688-10152919,10153602-101538... 28 10.0
02_01_0504 - 3673312-3673617 28 10.0
>02_02_0063 + 6481568-6481570,6481922-6482470
Length = 183
Score = 33.5 bits (73), Expect = 0.20
Identities = 21/51 (41%), Positives = 27/51 (52%)
Frame = -1
Query: 434 ATGRRCIASRPGRLVLVQRGIPGHQRHRLGGPTGCRTETADVLEPSIRLEG 282
ATGRR A+RPGRLV + + G +R GP G R A+ + R G
Sbjct: 130 ATGRRDAATRPGRLVAMAATV-GSRREERRGPAG-RPAPAEAVRTRRRRRG 178
>05_06_0281 + 26912419-26913099
Length = 226
Score = 32.3 bits (70), Expect = 0.46
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = +1
Query: 238 QPDGAAHPKDAQPTEPSRRIEGSKTSAVSVRQPVGPPRRCRWCPGIPRWTRTSLPGRD 411
+P G P + P P+ + +R+P GP W PG+P T+T L G D
Sbjct: 82 RPVGPTPPPPSHPVVPTPTQLAADDDGGLLRRPGGPTPPSPWHPGVP--TQTQLAGGD 137
>11_07_0002 - 27171791-27172222
Length = 143
Score = 31.9 bits (69), Expect = 0.61
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Frame = -3
Query: 429 RSTVYRVPTRQAGSGPAGYSGTPAAPSGRPDG----LPYRDGRRF 307
RS+ + +AGS PAG G+PA G P G P GR F
Sbjct: 55 RSSAASTSSARAGSTPAGVRGSPAGAGGSPGGGSGSTPVGGGRSF 99
>09_02_0279 + 6702517-6702948
Length = 143
Score = 31.9 bits (69), Expect = 0.61
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Frame = -3
Query: 429 RSTVYRVPTRQAGSGPAGYSGTPAAPSGRPDG----LPYRDGRRF 307
RS+ + +AGS PAG G+PA G P G P GR F
Sbjct: 55 RSSAASTSSARAGSTPAGVRGSPAGAGGSPGGGSGSTPVGGGRSF 99
>06_03_0447 + 20878444-20878821
Length = 125
Score = 31.5 bits (68), Expect = 0.81
Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +1
Query: 220 LPRSTLQPD-GAAHPKDAQPTEPSRRIEGSKTSAVSVRQPVGPPRRCRWCPGIPR 381
LP +TL PD G A R G+K +A S+ P PP R R C +PR
Sbjct: 71 LPLTTLPPDSGGGEGVPASYRRSCRASAGAKATATSILAPQTPPLRHR-CLLLPR 124
>01_01_0386 -
2985563-2985986,2986301-2986390,2986529-2986668,
2986798-2986893,2987003-2987042,2987760-2987887
Length = 305
Score = 31.1 bits (67), Expect = 1.1
Identities = 27/106 (25%), Positives = 39/106 (36%)
Frame = +3
Query: 189 PRSEPG*GRGATAVNTTTRRRGSPQGRPADGAFEANRRL*NVGRLGTAARRAAQTVPLVS 368
P G RG + + +R Q D E R R + R +++
Sbjct: 144 PSPRRGRSRGRSYSRSRSRSYSRSQSPRRDSRNERRSRSPRDSRSPRGSPRDSRS----P 199
Query: 369 RNTPLDQNQPAGSGRDTPSTGRSNHSTAARXSAGSAPHGLTPSGRP 506
R +P D P GS RDT S S + + + S P+G S P
Sbjct: 200 RGSPRDSRSPKGSPRDTQSPRGSPRDSRSPRRSASPPNGRNRSPTP 245
>02_01_0302 - 2021221-2023305
Length = 694
Score = 30.7 bits (66), Expect = 1.4
Identities = 29/105 (27%), Positives = 39/105 (37%), Gaps = 2/105 (1%)
Frame = +3
Query: 189 PRSEPG*G-RGATA-VNTTTRRRGSPQGRPADGAFEANRRL*NVGRLGTAARRAAQTVPL 362
P PG G +G A V++ RRRG P+ + + + + P
Sbjct: 389 PGGSPGRGGQGPPAPVSSPPRRRGPYPQPPSSSPTPSYPSPSSSYPAPPGSNTPSYPSPP 448
Query: 363 VSRNTPLDQNQPAGSGRDTPSTGRSNHSTAARXSAGSAPHGLTPS 497
S TP + P GS TPS N + S S P TPS
Sbjct: 449 SSATTPSSHSPPGGSSSTTPSYPSPNGGKPSTPSHPSPPGSTTPS 493
>11_08_0092 -
28307180-28307380,28307471-28307936,28308008-28308117,
28308206-28308493,28309024-28309059
Length = 366
Score = 29.9 bits (64), Expect = 2.5
Identities = 29/97 (29%), Positives = 37/97 (38%), Gaps = 1/97 (1%)
Frame = +1
Query: 145 LNDSSALLHPTSDPLRGQNPDEVGGLPRSTLQPDGAAHPKDAQPTEPSRRIEGSKTSAVS 324
+ND A H D + G+ PD QP A P+D QP PS + TS
Sbjct: 179 INDLDAGRH---DAVHGEQPDGERDADEHRGQPHQRAAPRDVQPPSPSS--SPATTSPAH 233
Query: 325 VRQPVGPPRRCRWCPGIPRW-TRTSLPGRDAIHRRPV 432
R+ G P P W + LP R R P+
Sbjct: 234 PRRAHGQVLLGSH-PRGPHWRVQGHLPQRQGPRRVPI 269
>09_04_0156 - 15190502-15190903,15191149-15191154,15191512-15192351
Length = 415
Score = 25.8 bits (54), Expect(2) = 3.1
Identities = 23/66 (34%), Positives = 30/66 (45%), Gaps = 6/66 (9%)
Frame = +3
Query: 96 HGVVSRPRA-QGF*SPPTKRLLCTLTPDV-----RSPPRSEPG*GRGATAVNTTTRRRGS 257
HG +S PR+ +P +R +TP V RSP P RG A + + RG
Sbjct: 50 HGALSAPRSGDEEITPWWRRSPSAVTPPVYPHVERSP---SPPIARGWPADDDERQERGE 106
Query: 258 PQGRPA 275
P G PA
Sbjct: 107 PSGSPA 112
Score = 22.2 bits (45), Expect(2) = 3.1
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 2/66 (3%)
Frame = +3
Query: 348 QTVPLVSRNTPLDQNQPAGSGRDTPSTGRSNHSTAARXSAGSA--PHGLTPSGRPLXFTG 521
Q P V ++TPL +PA + + TAA A A G TP G+
Sbjct: 153 QPAPHVEQSTPLPAKEPAAVAK---VEADAIVQTAANADADQALLGKGATPGGQGCTGQK 209
Query: 522 GEAATY 539
GE +
Sbjct: 210 GEEGDF 215
>06_01_0738 +
5458182-5458374,5460512-5461766,5461861-5462053,
5462151-5462344,5462443-5462601,5462683-5463025
Length = 778
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +3
Query: 372 NTPLDQNQPAGSGRDTPSTGRSNHSTAARXSAGSAPHGLTPSGRPLXFTGGEA 530
N+ ++Q+ PAG G +PST S S SA + + S + +GGEA
Sbjct: 126 NSAVEQSSPAGDGGGSPSTASS--SAGKSSSANTGEESVDKSNKQSG-SGGEA 175
>04_03_0849 +
20265511-20265984,20266452-20266617,20266694-20266905,
20267154-20267647,20267732-20267780,20267922-20268251
Length = 574
Score = 29.5 bits (63), Expect = 3.3
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +1
Query: 319 VSVRQPVGPPRRCRWCPGIPRWTR 390
+ + + V PP R WCP RW R
Sbjct: 1 MEIARVVAPPLRLAWCPASRRWGR 24
>11_01_0763 + 6402901-6403971,6404581-6404826
Length = 438
Score = 29.1 bits (62), Expect = 4.3
Identities = 19/49 (38%), Positives = 21/49 (42%)
Frame = +3
Query: 204 G*GRGATAVNTTTRRRGSPQGRPADGAFEANRRL*NVGRLGTAARRAAQ 350
G GRGA R RG G DGA + RRL AA R A+
Sbjct: 54 GGGRGAATHQGRRRWRGVGSGGGGDGAATSRRRLARQPAAAVAAARCAR 102
>09_01_0043 +
790859-790873,791410-791603,792521-792605,792719-793075
Length = 216
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -3
Query: 399 QAGSGPAGYSGTPAAPSGRPDGLPYRDG 316
++GSG AG G+ A GR DG RDG
Sbjct: 118 RSGSGKAGCVGSRADQDGRLDGREVRDG 145
>07_03_1389 +
26212117-26212119,26212721-26212875,26213402-26213479,
26214211-26214375,26214453-26214554,26214661-26214786,
26215454-26215490
Length = 221
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 176 RPIPSEVRTRMR*GGYRGQHYNQTARLTPR 265
R PSE+R+R R G RG+ Y+Q +PR
Sbjct: 121 RKKPSEMRSRDRISGSRGRSYDQRYSRSPR 150
>07_03_0369 -
17356806-17356934,17357145-17357278,17357989-17358247,
17358322-17358410,17358644-17358794,17358889-17359032,
17359358-17359477,17359595-17359769,17359842-17360215
Length = 524
Score = 29.1 bits (62), Expect = 4.3
Identities = 25/71 (35%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = +1
Query: 136 AHPLNDSSALLHPTSDPLRGQNPDEVGGLPRSTLQPDGAA---HPKDAQPTEPSRRIEGS 306
A P + S L PT+ L P G LPRS A HP+DA P+ PS R +G
Sbjct: 26 ASPEDGSPFLRLPTASDL----PVPAGQLPRSAAVGLIRALNLHPRDASPS-PSSRGDGD 80
Query: 307 KTSAVSVRQPV 339
+ V +P+
Sbjct: 81 VPAGTLVERPI 91
>03_02_0234 + 6625417-6626184,6626314-6626339,6626435-6626531,
6627009-6627116,6627194-6627328,6627429-6627528,
6627763-6627974,6628060-6628125,6628231-6628464,
6628583-6628641,6628716-6628782,6628863-6629192,
6629267-6629335,6629417-6629503,6629605-6629692,
6630057-6630178,6630251-6630355,6630442-6630485,
6630558-6630627,6630711-6630814,6630980-6631189,
6632935-6633018,6633291-6634003,6634115-6634649,
6634703-6634789,6634826-6634970,6635049-6635125,
6635215-6635359,6635462-6635626,6635725-6635958
Length = 1761
Score = 29.1 bits (62), Expect = 4.3
Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = +3
Query: 366 SRNTPLDQNQPAGSGRDTPSTGRSNHSTAARXSAGSAPHGLTPS-GRPLXFTGG 524
S + P Q+ P GS S S S S+GSAP +PS P TGG
Sbjct: 1141 SSSPPSSQSPPPGSSPPPASPPPSTPSAPPTNSSGSAPSPPSPSQSAPPANTGG 1194
>08_02_0819 -
21529913-21530064,21531016-21531082,21531284-21531373,
21531506-21531622,21532026-21532145,21532313-21533581
Length = 604
Score = 28.7 bits (61), Expect = 5.7
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Frame = +3
Query: 327 TAARRAAQTVPLVSRN--TPLDQN--QPAGSGRDTPSTGRSNHSTAARXSAGSAPHGLTP 494
T R+AA TV R P ++N PAG R+ S +S + A + +A S +P
Sbjct: 6 TEGRKAAGTVDCALRQPLVPPEKNIAAPAGRRREVASRFKSGGTPAPQAAASSVRRCTSP 65
Query: 495 SGRPLXFTGGEAATYRGR 548
S G A+T R +
Sbjct: 66 SLSRASAAEGTASTNRAQ 83
Score = 28.3 bits (60), Expect = 7.6
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +3
Query: 324 GTAARRAAQTVPLVSRNTPLDQNQPAGSGRDTPSTGRSNHSTAARXSAGSAPHGLT 491
GTA+ AQ+ +TP + P+G G S R T R +A + HG++
Sbjct: 75 GTASTNRAQSAERRRSSTPSSSSTPSGGGGGAASRPR----TPVRVAAATEVHGIS 126
>07_03_0111 +
13535912-13535972,13536081-13536142,13536418-13536510,
13537577-13537649,13537876-13538265,13538337-13538404,
13539334-13539375,13540211-13540735,13540817-13540974,
13541078-13541636,13542438-13542500,13542579-13542680,
13542779-13543096,13543175-13543267,13543489-13543590,
13543678-13543782,13544190-13544323,13545097-13545280,
13545701-13545832,13546215-13546327,13546468-13546558,
13547138-13549339
Length = 1889
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +3
Query: 174 DVRSPPRSEPG*GRGATAVNTTTRRRGSPQGRPADGAFEA 293
D + P EP + +A T RR GSP PA A +A
Sbjct: 135 DAAADPAKEPSGSKAGSAAATGGRRTGSPPPSPAPVAKDA 174
>05_03_0634 + 16432679-16433076,16433358-16433610,16433993-16434291,
16434553-16434729,16435001-16435621,16435690-16435784,
16436000-16436088,16436185-16436250,16436475-16437026,
16437879-16437953,16438305-16438375,16438456-16438513,
16441506-16442048
Length = 1098
Score = 28.7 bits (61), Expect = 5.7
Identities = 20/73 (27%), Positives = 29/73 (39%)
Frame = +3
Query: 246 RRGSPQGRPADGAFEANRRL*NVGRLGTAARRAAQTVPLVSRNTPLDQNQPAGSGRDTPS 425
R GS GRP+ + R+ + TA A + L + P+G+GRD S
Sbjct: 972 RDGSRSGRPSSSNAKGERKNKTKPKQKTANISAPVSSALTRDPQSQAKITPSGNGRDNTS 1031
Query: 426 TGRSNHSTAARXS 464
+ H A S
Sbjct: 1032 AASARHEEPANAS 1044
>02_01_0468 + 3357043-3357226,3357695-3358155
Length = 214
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/48 (31%), Positives = 19/48 (39%)
Frame = +3
Query: 402 GSGRDTPSTGRSNHSTAARXSAGSAPHGLTPSGRPLXFTGGEAATYRG 545
GS PS+ S S + G AP G P G P G ++ G
Sbjct: 132 GSSASPPSSSSSPSSPSGGGGGGGAPAGQAPPGAPATPAGTNSSPANG 179
>11_01_0625 + 5030571-5031016,5031333-5031627
Length = 246
Score = 28.3 bits (60), Expect = 7.6
Identities = 22/72 (30%), Positives = 33/72 (45%)
Frame = +3
Query: 264 GRPADGAFEANRRL*NVGRLGTAARRAAQTVPLVSRNTPLDQNQPAGSGRDTPSTGRSNH 443
GR +GA + + +V R G A +VPL N +D+ + SG D+ +T +
Sbjct: 144 GRGTEGAHVGHHQKPSVSREGARVGAAGSSVPL--GNNAVDEASSSTSGDDS-TTAPAAL 200
Query: 444 STAARXSAGSAP 479
TAA G P
Sbjct: 201 RTAAVDGDGEPP 212
>06_01_0808 + 6097751-6097913,6098298-6098731
Length = 198
Score = 28.3 bits (60), Expect = 7.6
Identities = 22/71 (30%), Positives = 29/71 (40%)
Frame = +3
Query: 333 ARRAAQTVPLVSRNTPLDQNQPAGSGRDTPSTGRSNHSTAARXSAGSAPHGLTPSGRPLX 512
A +A T P TP P S TP+T + + A+ SAG+A GL +
Sbjct: 128 APKAPSTTPTTPSTTPATPASPGTSSGLTPTTPATVLAPPAKQSAGAA--GLRARSWAML 185
Query: 513 FTGGEAATYRG 545
G AA G
Sbjct: 186 GLAGLAAVQLG 196
>02_01_0289 - 1937125-1937385,1937570-1937611
Length = 100
Score = 28.3 bits (60), Expect = 7.6
Identities = 17/45 (37%), Positives = 19/45 (42%)
Frame = +3
Query: 141 PTKRLLCTLTPDVRSPPRSEPG*GRGATAVNTTTRRRGSPQGRPA 275
PT LC + PD SP R P G G + RR G G A
Sbjct: 36 PTSGSLCAMLPDSCSPHR--PQLGVGCRQIGVRRRRTGGMNGSGA 78
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 27.9 bits (59), Expect = 10.0
Identities = 21/81 (25%), Positives = 32/81 (39%), Gaps = 1/81 (1%)
Frame = +1
Query: 175 TSDPLRGQNPDEVGGLPRSTLQ-PDGAAHPKDAQPTEPSRRIEGSKTSAVSVRQPVGPPR 351
T P + P+E P S + P AHP P+E S ++S + + PP
Sbjct: 767 TPSPPKSSPPEEKSPPPHSPEKSPPSEAHPTSPPPSEKSPPTPAEESSPPTPEKSPSPPS 826
Query: 352 RCRWCPGIPRWTRTSLPGRDA 414
P P ++S P +A
Sbjct: 827 GHEGTPPSP--VKSSSPPPEA 845
>09_04_0629 - 19098087-19098516,19099120-19099370
Length = 226
Score = 27.9 bits (59), Expect = 10.0
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +3
Query: 366 SRNTPLDQNQPAGSGRDTPSTGRSNHSTAARXSAGSA 476
+R T ++PA SGR S S+ STA R A
Sbjct: 52 ARGTTSSSSEPASSGRSPTSPSTSSSSTAMRFRKAEA 88
>08_02_0783 -
21166491-21166892,21167139-21167251,21168127-21168208,
21168298-21168416,21168471-21168528,21168954-21169016,
21169641-21169850,21171549-21171731
Length = 409
Score = 27.9 bits (59), Expect = 10.0
Identities = 39/166 (23%), Positives = 66/166 (39%), Gaps = 2/166 (1%)
Frame = +3
Query: 24 VEGRTSYEVPAQKGRAGYVRLNDLHGVVSRPRAQGF*--SPPTKRLLCTLTPDVRSPPRS 197
+EG Y+ K Y R DL+ R++ + S P+ ++ ++P S
Sbjct: 250 LEGHCIYDGGYCKLHLSYSRHTDLNVKAHDERSRDYTVSSDPSAQMQAA----AQAPGPS 305
Query: 198 EPG*GRGATAVNTTTRRRGSPQGRPADGAFEANRRL*NVGRLGTAARRAAQTVPLVSRNT 377
PG TA + + GS G A G G+A+ A T P++ +
Sbjct: 306 TPGVAWQNTAPSASFY--GSTAAATPVGQVPAWNPNMQAGAFGSASS-AYPTQPMMPGSV 362
Query: 378 PLDQNQPAGSGRDTPSTGRSNHSTAARXSAGSAPHGLTPSGRPLXF 515
P + SG P + +++H +APH P+G+P+ F
Sbjct: 363 PHYPGIGSSSGA-LPVSFQASHQMPQYGVPPAAPHHAPPAGQPMYF 407
>08_01_1025 +
10361064-10361237,10361807-10361877,10362001-10362235,
10362317-10362520
Length = 227
Score = 27.9 bits (59), Expect = 10.0
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = +1
Query: 133 RAHPLNDSSALLHPTSDP---LRG-QNPDEVGGLPRSTLQPDGAAHPKDAQ 273
RA P+ D + P+S+ L G Q P VG + R ++ D AA P DA+
Sbjct: 147 RASPVIDLNEACEPSSEEMEELHGYQEPVRVGRVMRYPMEGDFAAGPSDAK 197
>03_06_0199 + 32310272-32311432
Length = 386
Score = 27.9 bits (59), Expect = 10.0
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -1
Query: 83 SHIPRAPLLRGDLVGGSALYPKKKKK 6
S PR PLLRG + GGSA + + +K
Sbjct: 203 SREPRVPLLRGGIRGGSAAHLQDGQK 228
>03_02_0539 - 9329572-9330729,9330988-9331041
Length = 403
Score = 27.9 bits (59), Expect = 10.0
Identities = 24/92 (26%), Positives = 30/92 (32%)
Frame = +3
Query: 246 RRGSPQGRPADGAFEANRRL*NVGRLGTAARRAAQTVPLVSRNTPLDQNQPAGSGRDTPS 425
R GS + P G N+R A ++ + P S L P G PS
Sbjct: 127 RGGSLRNVPVGGGCRRNKRSGKSSSAAAAGASSSSSKPSSSAARQL----PGGGASPMPS 182
Query: 426 TGRSNHSTAARXSAGSAPHGLTPSGRPLXFTG 521
S A A P GL+ L F G
Sbjct: 183 AAASTQPGGAAAGAIIPPSGLSSMSHHLPFLG 214
>02_05_0077 +
25645730-25645993,25647172-25647648,25648027-25648237,
25648407-25648564,25648641-25648711,25648829-25648934,
25649008-25649094,25649701-25650252,25650337-25650403,
25650971-25651104,25651175-25651228,25651376-25651472,
25652007-25652212,25652287-25652367,25652543-25652608,
25653025-25653098,25653766-25653871
Length = 936
Score = 27.9 bits (59), Expect = 10.0
Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = +1
Query: 178 SDPLRGQNPDEVGGLPRSTLQPDGAAHPKDAQPTEPSRRIEGSKTSAVSVRQPVGPPR-R 354
SDPL+G E G +P S L PD Q + +R + V+ PV P +
Sbjct: 520 SDPLQGSPAREEGEVPESELDPDTRRRLLILQHGQDTRDPTPPLPAVPPVQVPVPPVQPH 579
Query: 355 CRWCP 369
W P
Sbjct: 580 GNWFP 584
>02_02_0431 -
10152228-10152352,10152688-10152919,10153602-10153808,
10153915-10154034,10154114-10154260,10155080-10155147,
10155502-10155667,10156765-10156914,10157219-10157335,
10158177-10158281,10159050-10159147,10159594-10159763,
10161489-10161511,10161927-10162006,10162191-10162259,
10163198-10163442,10163614-10163810
Length = 772
Score = 27.9 bits (59), Expect = 10.0
Identities = 19/51 (37%), Positives = 22/51 (43%), Gaps = 3/51 (5%)
Frame = +1
Query: 316 AVSVRQPVGPPRRC---RWCPGIPRWTRTSLPGRDAIHRRPVALITPRQRA 459
AVS +P PPRRC R + +S P PV TPR RA
Sbjct: 9 AVSFPRPAPPPRRCAPRRHRRALAPRAASSSPSPSTAVAAPVYAPTPRDRA 59
>02_01_0504 - 3673312-3673617
Length = 101
Score = 27.9 bits (59), Expect = 10.0
Identities = 14/54 (25%), Positives = 24/54 (44%)
Frame = +3
Query: 312 VGRLGTAARRAAQTVPLVSRNTPLDQNQPAGSGRDTPSTGRSNHSTAARXSAGS 473
VG G R+ VP+ ++ + Q QP + ST + +A+ +A S
Sbjct: 31 VGAAGVGVGRSGSAVPIGAKPWVVQQQQPTATAAAVASTASTRLHASAQPAAAS 84
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,702,034
Number of Sequences: 37544
Number of extensions: 483771
Number of successful extensions: 1999
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1996
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2185924824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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