Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP13_T7_E11
         (857 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_06_0081 + 20745627-20748144,20748211-20748308                       31   1.6  
03_05_0543 - 25404630-25405408,25405461-25405605                       30   2.7  
04_03_0747 - 19251617-19251781,19252377-19252502,19252606-192527...    29   4.7  
09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817           28   8.3  
07_03_1710 - 28903614-28903673,28904982-28905146,28905453-289056...    28   8.3  

>09_06_0081 + 20745627-20748144,20748211-20748308
          Length = 871

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 13/31 (41%), Positives = 14/31 (45%)
 Frame = +1

Query: 367 PXPHXTPXXTPXXPPARATPXXRXPPRPAGS 459
           P PH      P  PPA ATP    PP  A +
Sbjct: 697 PAPHLRARRAPTSPPAAATPRAPTPPAAAAA 727


>03_05_0543 - 25404630-25405408,25405461-25405605
          Length = 307

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 12/28 (42%), Positives = 12/28 (42%)
 Frame = +1

Query: 367 PXPHXTPXXTPXXPPARATPXXRXPPRP 450
           P P   P   P  PPA   P  R PP P
Sbjct: 128 PPPQQPPQPEPRRPPAAPLPGVRTPPSP 155


>04_03_0747 -
           19251617-19251781,19252377-19252502,19252606-19252716,
           19252931-19253679,19254034-19254167,19254595-19254740,
           19255166-19255336,19255977-19256828
          Length = 817

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 12/29 (41%), Positives = 13/29 (44%)
 Frame = +1

Query: 367 PXPHXTPXXTPXXPPARATPXXRXPPRPA 453
           P P  TP  TP  PP  A P     P P+
Sbjct: 162 PLPARTPTPTPSAPPRAAAPSPAGTPSPS 190


>09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817
          Length = 883

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 12/31 (38%), Positives = 13/31 (41%)
 Frame = +1

Query: 367 PXPHXTPXXTPXXPPARATPXXRXPPRPAGS 459
           P PH      P  PPA A P    PP  A +
Sbjct: 728 PAPHLRARRVPTAPPAAARPRAPTPPAAAAA 758


>07_03_1710 -
           28903614-28903673,28904982-28905146,28905453-28905638,
           28905784-28905927,28906281-28906460,28906559-28907215
          Length = 463

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 11/28 (39%), Positives = 12/28 (42%)
 Frame = +1

Query: 367 PXPHXTPXXTPXXPPARATPXXRXPPRP 450
           P P  +P   P  PP   TP    PP P
Sbjct: 56  PPPKPSPTPPPASPPPAPTPPQTRPPSP 83


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,689,009
Number of Sequences: 37544
Number of extensions: 164636
Number of successful extensions: 747
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 735
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2397465936
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)