Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_T7_E04
(845 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetit... 32 2.3
AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetit... 32 2.3
AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetit... 32 2.3
AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetit... 32 2.3
AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetit... 32 2.3
AK128837-1|BAC87637.1| 286|Homo sapiens protein ( Homo sapiens ... 32 2.3
AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear... 32 2.3
AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear... 32 2.3
X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing f... 30 9.2
BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor proline... 30 9.2
BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein. 30 9.2
BC004534-1|AAH04534.2| 634|Homo sapiens SFPQ protein protein. 30 9.2
AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor proline... 30 9.2
>BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 32.3 bits (70), Expect = 2.3
Identities = 23/90 (25%), Positives = 27/90 (30%), Gaps = 2/90 (2%)
Frame = -1
Query: 761 PARHRXRPXXKPXRXTXP--PPTXPALHRRPXXXXPATXXNARCPXXXPREHXGGTAXRX 588
P R P P R P PP H P + R P + G + R
Sbjct: 610 PKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRS 669
Query: 587 RRXPGRXAXGXHRRXXXPRPRGPPLAXXXP 498
R R R PRPR P + P
Sbjct: 670 TRE-ARSPQPNKRHSPSPRPRAPQTSSSPP 698
>AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 32.3 bits (70), Expect = 2.3
Identities = 23/90 (25%), Positives = 27/90 (30%), Gaps = 2/90 (2%)
Frame = -1
Query: 761 PARHRXRPXXKPXRXTXP--PPTXPALHRRPXXXXPATXXNARCPXXXPREHXGGTAXRX 588
P R P P R P PP H P + R P + G + R
Sbjct: 610 PKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRS 669
Query: 587 RRXPGRXAXGXHRRXXXPRPRGPPLAXXXP 498
R R R PRPR P + P
Sbjct: 670 TRE-ARSPQPNKRHSPSPRPRAPQTSSSPP 698
>AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 32.3 bits (70), Expect = 2.3
Identities = 23/90 (25%), Positives = 27/90 (30%), Gaps = 2/90 (2%)
Frame = -1
Query: 761 PARHRXRPXXKPXRXTXP--PPTXPALHRRPXXXXPATXXNARCPXXXPREHXGGTAXRX 588
P R P P R P PP H P + R P + G + R
Sbjct: 619 PKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRS 678
Query: 587 RRXPGRXAXGXHRRXXXPRPRGPPLAXXXP 498
R R R PRPR P + P
Sbjct: 679 TRE-ARSPQPNKRHSPSPRPRAPQTSSSPP 707
>AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 32.3 bits (70), Expect = 2.3
Identities = 23/90 (25%), Positives = 27/90 (30%), Gaps = 2/90 (2%)
Frame = -1
Query: 761 PARHRXRPXXKPXRXTXP--PPTXPALHRRPXXXXPATXXNARCPXXXPREHXGGTAXRX 588
P R P P R P PP H P + R P + G + R
Sbjct: 610 PKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRS 669
Query: 587 RRXPGRXAXGXHRRXXXPRPRGPPLAXXXP 498
R R R PRPR P + P
Sbjct: 670 TRE-ARSPQPNKRHSPSPRPRAPQTSSSPP 698
>AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 32.3 bits (70), Expect = 2.3
Identities = 23/90 (25%), Positives = 27/90 (30%), Gaps = 2/90 (2%)
Frame = -1
Query: 761 PARHRXRPXXKPXRXTXP--PPTXPALHRRPXXXXPATXXNARCPXXXPREHXGGTAXRX 588
P R P P R P PP H P + R P + G + R
Sbjct: 619 PKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRS 678
Query: 587 RRXPGRXAXGXHRRXXXPRPRGPPLAXXXP 498
R R R PRPR P + P
Sbjct: 679 TRE-ARSPQPNKRHSPSPRPRAPQTSSSPP 707
>AK128837-1|BAC87637.1| 286|Homo sapiens protein ( Homo sapiens
cDNA FLJ46366 fis, clone TESTI4051388. ).
Length = 286
Score = 32.3 bits (70), Expect = 2.3
Identities = 25/74 (33%), Positives = 29/74 (39%), Gaps = 3/74 (4%)
Frame = -3
Query: 762 TGXPPXAPPXETXPXHXPAXXXTGPAP---PTXAXXARDTXERSXPXXXAPRARRXHGXP 592
T PP APP T P PA +P P A AR T R+ P PRA P
Sbjct: 82 TRMPPTAPPTRTPPTASPARTPPTESPARTPPTASPAR-TPPRASPTRTPPRA-SPRRTP 139
Query: 591 XSSXPRXXRXRXXP 550
++ P R P
Sbjct: 140 STASPTRTPPRASP 153
>AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 32.3 bits (70), Expect = 2.3
Identities = 23/90 (25%), Positives = 27/90 (30%), Gaps = 2/90 (2%)
Frame = -1
Query: 761 PARHRXRPXXKPXRXTXP--PPTXPALHRRPXXXXPATXXNARCPXXXPREHXGGTAXRX 588
P R P P R P PP H P + R P + G + R
Sbjct: 608 PKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRS 667
Query: 587 RRXPGRXAXGXHRRXXXPRPRGPPLAXXXP 498
R R R PRPR P + P
Sbjct: 668 TRE-ARSPQPNKRHSPSPRPRAPQTSSSPP 696
>AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 32.3 bits (70), Expect = 2.3
Identities = 23/90 (25%), Positives = 27/90 (30%), Gaps = 2/90 (2%)
Frame = -1
Query: 761 PARHRXRPXXKPXRXTXP--PPTXPALHRRPXXXXPATXXNARCPXXXPREHXGGTAXRX 588
P R P P R P PP H P + R P + G + R
Sbjct: 608 PKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRS 667
Query: 587 RRXPGRXAXGXHRRXXXPRPRGPPLAXXXP 498
R R R PRPR P + P
Sbjct: 668 TRE-ARSPQPNKRHSPSPRPRAPQTSSSPP 696
>X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing
factor protein.
Length = 707
Score = 30.3 bits (65), Expect = 9.2
Identities = 16/56 (28%), Positives = 19/56 (33%)
Frame = -3
Query: 759 GXPPXAPPXETXPXHXPAXXXTGPAPPTXAXXARDTXERSXPXXXAPRARRXHGXP 592
G PP PP P P GP PP A + P P+ + G P
Sbjct: 163 GAPPPTPPSSGVPTTPPQAG--GPPPPPAAVPGPGPGPKQGPGPGGPKGGKMPGGP 216
>BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 30.3 bits (65), Expect = 9.2
Identities = 16/56 (28%), Positives = 19/56 (33%)
Frame = -3
Query: 759 GXPPXAPPXETXPXHXPAXXXTGPAPPTXAXXARDTXERSXPXXXAPRARRXHGXP 592
G PP PP P P GP PP A + P P+ + G P
Sbjct: 163 GAPPPTPPSSGVPTTPPQAG--GPPPPPAAVPGPGPGPKQGPGPGGPKGGKMPGGP 216
>BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein.
Length = 525
Score = 30.3 bits (65), Expect = 9.2
Identities = 16/56 (28%), Positives = 19/56 (33%)
Frame = -3
Query: 759 GXPPXAPPXETXPXHXPAXXXTGPAPPTXAXXARDTXERSXPXXXAPRARRXHGXP 592
G PP PP P P GP PP A + P P+ + G P
Sbjct: 163 GAPPPTPPSSGVPTTPPQAG--GPPPPPAAVPGPGPGPKQGPGPGGPKGGKMPGGP 216
>BC004534-1|AAH04534.2| 634|Homo sapiens SFPQ protein protein.
Length = 634
Score = 30.3 bits (65), Expect = 9.2
Identities = 16/56 (28%), Positives = 19/56 (33%)
Frame = -3
Query: 759 GXPPXAPPXETXPXHXPAXXXTGPAPPTXAXXARDTXERSXPXXXAPRARRXHGXP 592
G PP PP P P GP PP A + P P+ + G P
Sbjct: 90 GAPPPTPPSSGVPTTPPQAG--GPPPPPAAVPGPGPGPKQGPGPGGPKGGKMPGGP 143
>AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 30.3 bits (65), Expect = 9.2
Identities = 16/56 (28%), Positives = 19/56 (33%)
Frame = -3
Query: 759 GXPPXAPPXETXPXHXPAXXXTGPAPPTXAXXARDTXERSXPXXXAPRARRXHGXP 592
G PP PP P P GP PP A + P P+ + G P
Sbjct: 163 GAPPPTPPSSGVPTTPPQAG--GPPPPPAAVPGPGPGPKQGPGPGGPKGGKMPGGP 216
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,590,009
Number of Sequences: 237096
Number of extensions: 1017929
Number of successful extensions: 2568
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2547
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10705443456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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