Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_T7_D22
(772 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical p... 29 2.8
Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical p... 29 2.8
Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical pr... 29 2.8
AL031630-13|CAA20992.1| 814|Caenorhabditis elegans Hypothetical... 29 3.7
Z81465-4|CAB03866.3| 613|Caenorhabditis elegans Hypothetical pr... 29 4.8
AL032646-13|CAA21687.3| 613|Caenorhabditis elegans Hypothetical... 29 4.8
DQ178242-1|ABA18181.1| 578|Caenorhabditis elegans Frizzled homo... 28 6.4
AL022716-4|CAA18773.1| 703|Caenorhabditis elegans Hypothetical ... 28 6.4
AF016413-2|ABA54421.1| 578|Caenorhabditis elegans Caenorhabditi... 28 6.4
AF016413-1|ABA54422.1| 550|Caenorhabditis elegans Caenorhabditi... 28 6.4
AB026113-1|BAA84678.1| 550|Caenorhabditis elegans Cfz2 protein. 28 6.4
Z93387-2|CAB07650.1| 763|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z70756-9|CAA94797.1| 275|Caenorhabditis elegans Hypothetical pr... 28 8.5
U42847-4|AAF23186.1| 1073|Caenorhabditis elegans Immunoglobulin-... 28 8.5
>Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical
protein R11A8.7b protein.
Length = 2584
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Frame = -1
Query: 682 VTTGITGL----WQPSVHSDVAFDPSMSALPIIAKQNSPSV 572
VTTG++ L W P+ + A DP+ S P+ A+ S SV
Sbjct: 2255 VTTGLSSLELKGWMPASFAPSARDPNRSQPPLFARSQSNSV 2295
>Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical
protein R11A8.7a protein.
Length = 2606
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Frame = -1
Query: 682 VTTGITGL----WQPSVHSDVAFDPSMSALPIIAKQNSPSV 572
VTTG++ L W P+ + A DP+ S P+ A+ S SV
Sbjct: 2277 VTTGLSSLELKGWMPASFAPSARDPNRSQPPLFARSQSNSV 2317
>Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical protein
R11A8.7d protein.
Length = 1427
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Frame = -1
Query: 682 VTTGITGL----WQPSVHSDVAFDPSMSALPIIAKQNSPSV 572
VTTG++ L W P+ + A DP+ S P+ A+ S SV
Sbjct: 1098 VTTGLSSLELKGWMPASFAPSARDPNRSQPPLFARSQSNSV 1138
>Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical protein
R11A8.7c protein.
Length = 1405
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Frame = -1
Query: 682 VTTGITGL----WQPSVHSDVAFDPSMSALPIIAKQNSPSV 572
VTTG++ L W P+ + A DP+ S P+ A+ S SV
Sbjct: 1076 VTTGLSSLELKGWMPASFAPSARDPNRSQPPLFARSQSNSV 1116
>Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical protein
R11A8.7b protein.
Length = 2584
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Frame = -1
Query: 682 VTTGITGL----WQPSVHSDVAFDPSMSALPIIAKQNSPSV 572
VTTG++ L W P+ + A DP+ S P+ A+ S SV
Sbjct: 2255 VTTGLSSLELKGWMPASFAPSARDPNRSQPPLFARSQSNSV 2295
>Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical protein
R11A8.7a protein.
Length = 2606
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Frame = -1
Query: 682 VTTGITGL----WQPSVHSDVAFDPSMSALPIIAKQNSPSV 572
VTTG++ L W P+ + A DP+ S P+ A+ S SV
Sbjct: 2277 VTTGLSSLELKGWMPASFAPSARDPNRSQPPLFARSQSNSV 2317
>AL031630-13|CAA20992.1| 814|Caenorhabditis elegans Hypothetical
protein Y38H6C.14 protein.
Length = 814
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +1
Query: 52 LSLNRSQHDAALPSTTPRQERKSPTDYSEPRHRTELYPDLRSRDARV 192
++ +RS + S+ Q+ SP+DY PRH +L P RS + RV
Sbjct: 71 ITQHRSSYKVTKSSSCHFQDEASPSDYQMPRH-LDLKP--RSSEVRV 114
>Z81465-4|CAB03866.3| 613|Caenorhabditis elegans Hypothetical
protein Y54E2A.1 protein.
Length = 613
Score = 28.7 bits (61), Expect = 4.8
Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 2/81 (2%)
Frame = +1
Query: 88 PSTTPRQERKSPTDYSEPRHRTELYPDLRSRDARVKKKTDSIDLRDPNGLRR--RVSRFE 261
PST R +SPTD S R DL S+ + +++ SI R P + + R
Sbjct: 502 PSTFMRHRPRSPTDVSHDSGRPRSPTDL-SQSTKPSRRSSSIRPRSPTSTSQMSTIVRSR 560
Query: 262 CETRLVKSHCLEPPDSRGSTV 324
T + L P +R T+
Sbjct: 561 SPTGASDTSSLFPSRTRSPTL 581
>AL032646-13|CAA21687.3| 613|Caenorhabditis elegans Hypothetical
protein Y54E2A.1 protein.
Length = 613
Score = 28.7 bits (61), Expect = 4.8
Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 2/81 (2%)
Frame = +1
Query: 88 PSTTPRQERKSPTDYSEPRHRTELYPDLRSRDARVKKKTDSIDLRDPNGLRR--RVSRFE 261
PST R +SPTD S R DL S+ + +++ SI R P + + R
Sbjct: 502 PSTFMRHRPRSPTDVSHDSGRPRSPTDL-SQSTKPSRRSSSIRPRSPTSTSQMSTIVRSR 560
Query: 262 CETRLVKSHCLEPPDSRGSTV 324
T + L P +R T+
Sbjct: 561 SPTGASDTSSLFPSRTRSPTL 581
>DQ178242-1|ABA18181.1| 578|Caenorhabditis elegans Frizzled homolog
protein.
Length = 578
Score = 28.3 bits (60), Expect = 6.4
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 93 HN-TPPGTEVAYRLFRAPTSN*VISGPSEP*CTC*EKNR*HRSPRSKWASTSRLAF 257
HN +P G EV + N VI+GPSE CTC + + S +SK + + A+
Sbjct: 168 HNYSPDGPEVGI----SKIDNEVIAGPSECQCTCNQPFQFVASEKSKVGNVTNCAY 219
>AL022716-4|CAA18773.1| 703|Caenorhabditis elegans Hypothetical
protein C24F3.4 protein.
Length = 703
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +1
Query: 67 SQHDAALPSTTPRQERKSPTDYSEPRHRTELYPDLRSRDARVKKK 201
++H A + + E SP D+ HR LYPD + R+++K
Sbjct: 651 NRHKATVSTPAIHAENYSPDDHRND-HRPFLYPDFSYQFERIREK 694
>AF016413-2|ABA54421.1| 578|Caenorhabditis elegans Caenorhabditis
frizzled homologprotein 2, isoform a protein.
Length = 578
Score = 28.3 bits (60), Expect = 6.4
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 93 HN-TPPGTEVAYRLFRAPTSN*VISGPSEP*CTC*EKNR*HRSPRSKWASTSRLAF 257
HN +P G EV + N VI+GPSE CTC + + S +SK + + A+
Sbjct: 168 HNYSPDGPEVGI----SKIDNEVIAGPSECQCTCNQPFQFVASEKSKVGNVTNCAY 219
>AF016413-1|ABA54422.1| 550|Caenorhabditis elegans Caenorhabditis
frizzled homologprotein 2, isoform b protein.
Length = 550
Score = 28.3 bits (60), Expect = 6.4
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 93 HN-TPPGTEVAYRLFRAPTSN*VISGPSEP*CTC*EKNR*HRSPRSKWASTSRLAF 257
HN +P G EV + N VI+GPSE CTC + + S +SK + + A+
Sbjct: 168 HNYSPDGPEVGI----SKIDNEVIAGPSECQCTCNQPFQFVASEKSKVGNVTNCAY 219
>AB026113-1|BAA84678.1| 550|Caenorhabditis elegans Cfz2 protein.
Length = 550
Score = 28.3 bits (60), Expect = 6.4
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 93 HN-TPPGTEVAYRLFRAPTSN*VISGPSEP*CTC*EKNR*HRSPRSKWASTSRLAF 257
HN +P G EV + N VI+GPSE CTC + + S +SK + + A+
Sbjct: 168 HNYSPDGPEVGI----SKIDNEVIAGPSECQCTCNQPFQFVASEKSKVGNVTNCAY 219
>Z93387-2|CAB07650.1| 763|Caenorhabditis elegans Hypothetical
protein T02E9.3 protein.
Length = 763
Score = 27.9 bits (59), Expect = 8.5
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = -3
Query: 446 FGHLVHALGRAAGGAKLPSAGLCLNASKAEASLAESGKDMLTVEPRESGGSKQCDFTSRV 267
FG L H G LP + S+ + ++++G + R+SGGSK+ +
Sbjct: 212 FGQLTHRGGERERRHSLPRVIIEEVRSRRGSRMSQTGSQSGSPTRRQSGGSKERSPSQPD 271
Query: 266 SH--SKRETRRRSP 231
H +K + R RSP
Sbjct: 272 IHIVAKPQQRWRSP 285
>Z70756-9|CAA94797.1| 275|Caenorhabditis elegans Hypothetical
protein T06E4.11 protein.
Length = 275
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 64 RSQHDAALPSTTPRQERKSPTDYSEPRHRTELYP 165
+SQ P P+Q + PT Y++P + + YP
Sbjct: 55 QSQQAPQAPQGYPQQPPQDPTQYAQPPQQQQPYP 88
>U42847-4|AAF23186.1| 1073|Caenorhabditis elegans Immunoglobulin-like
cell adhesionmolecule family protein 1 protein.
Length = 1073
Score = 27.9 bits (59), Expect = 8.5
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 91 STTPRQERKSPTDYSEPRHRT 153
++ P E K P DY EP+H T
Sbjct: 981 TSLPGDELKRPADYEEPKHAT 1001
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,517,796
Number of Sequences: 27780
Number of extensions: 372147
Number of successful extensions: 1057
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 987
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1057
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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