Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP13_T7_D15
         (818 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1400 + 26287124-26287298,26287925-26288007,26288141-262882...    29   4.4  

>07_03_1400 +
           26287124-26287298,26287925-26288007,26288141-26288270,
           26288369-26288442,26288797-26288883,26288976-26289100,
           26289232-26289292,26289606-26289683,26289785-26289890,
           26289978-26290123,26290264-26290380
          Length = 393

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 14/49 (28%), Positives = 27/49 (55%)
 Frame = -1

Query: 686 RVFNXGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 540
           R F  G+ SW+        ++++   W ND+++C F+  SR  +S+ M+
Sbjct: 72  RGFGSGANSWL--------VNLEGGGWCNDVKSCVFRKSSRRGSSNHME 112


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,806,249
Number of Sequences: 37544
Number of extensions: 340737
Number of successful extensions: 934
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 916
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 934
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2244686244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)