Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP13_T7_D12
         (868 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p...    31   1.4  
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p...    31   1.4  
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p...    31   1.4  
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr...    31   1.4  
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr...    31   1.4  
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr...    31   1.4  
X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein.     31   1.4  

>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
            protein ZK617.1c protein.
          Length = 6629

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +2

Query: 41   PXKPWGPLEREIIFKNXGREPWKPPNPNFG 130
            P KP GPLE   +F++     WKPP+ + G
Sbjct: 1657 PSKPNGPLEVSDVFEDNLNLSWKPPDDDGG 1686



 Score = 30.7 bits (66), Expect = 1.4
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +2

Query: 41   PXKPWGPLEREIIFKNXGREPWKPPNPNFG 130
            P KP GP+E   +F++     WKPP  + G
Sbjct: 2243 PTKPKGPIEVTDVFEDRATLDWKPPEDDGG 2272



 Score = 27.9 bits (59), Expect = 9.9
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = +2

Query: 41   PXKPWGPLEREIIFKNXGREPWKPPNPNFG 130
            P  P GPL+ + I K      WKPP  N G
Sbjct: 3422 PGTPEGPLKIDEIHKEGCTLNWKPPTDNGG 3451


>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
            protein ZK617.1b protein.
          Length = 7158

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +2

Query: 41   PXKPWGPLEREIIFKNXGREPWKPPNPNFG 130
            P KP GPLE   +F++     WKPP+ + G
Sbjct: 2186 PSKPNGPLEVSDVFEDNLNLSWKPPDDDGG 2215



 Score = 30.7 bits (66), Expect = 1.4
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +2

Query: 41   PXKPWGPLEREIIFKNXGREPWKPPNPNFG 130
            P KP GP+E   +F++     WKPP  + G
Sbjct: 2772 PTKPKGPIEVTDVFEDRATLDWKPPEDDGG 2801



 Score = 27.9 bits (59), Expect = 9.9
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = +2

Query: 41   PXKPWGPLEREIIFKNXGREPWKPPNPNFG 130
            P  P GPL+ + I K      WKPP  N G
Sbjct: 3951 PGTPEGPLKIDEIHKEGCTLNWKPPTDNGG 3980


>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
            protein ZK617.1a protein.
          Length = 6839

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +2

Query: 41   PXKPWGPLEREIIFKNXGREPWKPPNPNFG 130
            P KP GPLE   +F++     WKPP+ + G
Sbjct: 1867 PSKPNGPLEVSDVFEDNLNLSWKPPDDDGG 1896



 Score = 30.7 bits (66), Expect = 1.4
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +2

Query: 41   PXKPWGPLEREIIFKNXGREPWKPPNPNFG 130
            P KP GP+E   +F++     WKPP  + G
Sbjct: 2453 PTKPKGPIEVTDVFEDRATLDWKPPEDDGG 2482



 Score = 27.9 bits (59), Expect = 9.9
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = +2

Query: 41   PXKPWGPLEREIIFKNXGREPWKPPNPNFG 130
            P  P GPL+ + I K      WKPP  N G
Sbjct: 3632 PGTPEGPLKIDEIHKEGCTLNWKPPTDNGG 3661


>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical protein
            ZK617.1c protein.
          Length = 6629

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +2

Query: 41   PXKPWGPLEREIIFKNXGREPWKPPNPNFG 130
            P KP GPLE   +F++     WKPP+ + G
Sbjct: 1657 PSKPNGPLEVSDVFEDNLNLSWKPPDDDGG 1686



 Score = 30.7 bits (66), Expect = 1.4
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +2

Query: 41   PXKPWGPLEREIIFKNXGREPWKPPNPNFG 130
            P KP GP+E   +F++     WKPP  + G
Sbjct: 2243 PTKPKGPIEVTDVFEDRATLDWKPPEDDGG 2272



 Score = 27.9 bits (59), Expect = 9.9
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = +2

Query: 41   PXKPWGPLEREIIFKNXGREPWKPPNPNFG 130
            P  P GPL+ + I K      WKPP  N G
Sbjct: 3422 PGTPEGPLKIDEIHKEGCTLNWKPPTDNGG 3451


>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical protein
            ZK617.1b protein.
          Length = 7158

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +2

Query: 41   PXKPWGPLEREIIFKNXGREPWKPPNPNFG 130
            P KP GPLE   +F++     WKPP+ + G
Sbjct: 2186 PSKPNGPLEVSDVFEDNLNLSWKPPDDDGG 2215



 Score = 30.7 bits (66), Expect = 1.4
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +2

Query: 41   PXKPWGPLEREIIFKNXGREPWKPPNPNFG 130
            P KP GP+E   +F++     WKPP  + G
Sbjct: 2772 PTKPKGPIEVTDVFEDRATLDWKPPEDDGG 2801



 Score = 27.9 bits (59), Expect = 9.9
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = +2

Query: 41   PXKPWGPLEREIIFKNXGREPWKPPNPNFG 130
            P  P GPL+ + I K      WKPP  N G
Sbjct: 3951 PGTPEGPLKIDEIHKEGCTLNWKPPTDNGG 3980


>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical protein
            ZK617.1a protein.
          Length = 6839

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +2

Query: 41   PXKPWGPLEREIIFKNXGREPWKPPNPNFG 130
            P KP GPLE   +F++     WKPP+ + G
Sbjct: 1867 PSKPNGPLEVSDVFEDNLNLSWKPPDDDGG 1896



 Score = 30.7 bits (66), Expect = 1.4
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +2

Query: 41   PXKPWGPLEREIIFKNXGREPWKPPNPNFG 130
            P KP GP+E   +F++     WKPP  + G
Sbjct: 2453 PTKPKGPIEVTDVFEDRATLDWKPPEDDGG 2482



 Score = 27.9 bits (59), Expect = 9.9
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = +2

Query: 41   PXKPWGPLEREIIFKNXGREPWKPPNPNFG 130
            P  P GPL+ + I K      WKPP  N G
Sbjct: 3632 PGTPEGPLKIDEIHKEGCTLNWKPPTDNGG 3661


>X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein.
          Length = 6048

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +2

Query: 41   PXKPWGPLEREIIFKNXGREPWKPPNPNFG 130
            P KP GPLE   +F++     WKPP+ + G
Sbjct: 1076 PSKPNGPLEVSDVFEDNLNLSWKPPDDDGG 1105



 Score = 30.7 bits (66), Expect = 1.4
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +2

Query: 41   PXKPWGPLEREIIFKNXGREPWKPPNPNFG 130
            P KP GP+E   +F++     WKPP  + G
Sbjct: 1662 PTKPKGPIEVTDVFEDRATLDWKPPEDDGG 1691



 Score = 27.9 bits (59), Expect = 9.9
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = +2

Query: 41   PXKPWGPLEREIIFKNXGREPWKPPNPNFG 130
            P  P GPL+ + I K      WKPP  N G
Sbjct: 2841 PGTPEGPLKIDEIHKEGCTLNWKPPTDNGG 2870


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,001,404
Number of Sequences: 27780
Number of extensions: 240036
Number of successful extensions: 301
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 279
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)