Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP13_T7_D09
         (815 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0254 + 16236689-16236793,16237760-16237808,16237988-162380...    85   8e-17
03_05_0235 - 22214700-22214914,22218782-22219045,22219258-22219294     31   1.4  
09_06_0314 + 22242843-22243649                                         30   1.9  
03_06_0402 + 33681451-33681706,33682800-33682936,33683103-336831...    29   3.3  
03_02_0555 + 9431451-9431688,9432685-9432803,9432886-9433079,943...    29   4.4  
10_08_0936 - 21679002-21679800,21679893-21680116,21681174-216813...    28   7.7  

>10_08_0254 +
           16236689-16236793,16237760-16237808,16237988-16238076,
           16238178-16238234,16238684-16238746,16238828-16238893,
           16239520-16239606,16239691-16239784,16240351-16240673,
           16241022-16241048,16241065-16241145,16241445-16241476,
           16242126-16242266,16242455-16242516,16243170-16243387
          Length = 497

 Score = 84.6 bits (200), Expect = 8e-17
 Identities = 38/47 (80%), Positives = 43/47 (91%)
 Frame = -1

Query: 674 SFEASDAAIEAMNNQYXCNRPISVSYAFKKDVKGERHGSAAERLLAA 534
           SFE+SD AIEAMNNQ+ CNRPI+VSYA+KKD KGERHG+ AERLLAA
Sbjct: 163 SFESSDQAIEAMNNQHLCNRPITVSYAYKKDTKGERHGTPAERLLAA 209



 Score = 41.5 bits (93), Expect = 8e-04
 Identities = 29/92 (31%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
 Frame = -2

Query: 739 PKVMXDPETGKFKSFGF--Y*LCXHLRPRMQQL-KQ*ITSXYVTGRYQFHMHLRRM*KGR 569
           PK+M DPETG  + FGF  Y         ++ +  Q + +  +T  Y +    ++  KG 
Sbjct: 142 PKIMRDPETGNSRGFGFVSYDSFESSDQAIEAMNNQHLCNRPITVSYAY----KKDTKGE 197

Query: 568 GTXQQQRDYLLHKNPLSHADRPHQLFADAPPT 473
                    L   NP S  +RPH +FA  PPT
Sbjct: 198 RHGTPAERLLAANNPGSQKNRPHTMFASGPPT 229


>03_05_0235 - 22214700-22214914,22218782-22219045,22219258-22219294
          Length = 171

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 16/50 (32%), Positives = 28/50 (56%)
 Frame = -1

Query: 686 LTLXSFEASDAAIEAMNNQYXCNRPISVSYAFKKDVKGERHGSAAERLLA 537
           +T    E + AA++ M+      R ++V+YAF + +KG   G AA+ + A
Sbjct: 54  VTFLEREDAAAAMDNMDGAELFGRVLTVNYAFPERIKGGEQGWAAQPIWA 103


>09_06_0314 + 22242843-22243649
          Length = 268

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +1

Query: 490 QTAGEVCPHAIMDFCAASNLSAAXPCLSPFTSFL 591
           + A + C H+++ F A SN  AA   LS + SFL
Sbjct: 100 KAADKACVHSVVVFLAVSNERAAYGALSAYRSFL 133


>03_06_0402 +
           33681451-33681706,33682800-33682936,33683103-33683153,
           33683798-33683866,33684286-33684428,33685464-33685521,
           33685823-33685938,33686298-33686391,33686950-33686961
          Length = 311

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 17/61 (27%), Positives = 31/61 (50%)
 Frame = -1

Query: 695 WXLLTLXSFEASDAAIEAMNNQYXCNRPISVSYAFKKDVKGERHGSAAERLLAAQKSIIA 516
           + L+   SFE +  AI+AMN      R + V +AF +    ++  S +  +++  + II 
Sbjct: 173 YALVEYESFEEAQTAIKAMNGTQLLTRTVYVDWAFSRG-PIQKLTSTSSVIMSKPQMIIH 231

Query: 515 C 513
           C
Sbjct: 232 C 232


>03_02_0555 +
           9431451-9431688,9432685-9432803,9432886-9433079,
           9433174-9433430,9433544-9433650,9433715-9433888,
           9434359-9434490,9434776-9434955,9435062-9435265
          Length = 534

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = -1

Query: 668 EASDAAIEAMNNQYXCNRPISVSYAFKK 585
           E++DA+I+ +NN + C R + V+   KK
Sbjct: 165 ESADASIQNLNNSHFCGRQLHVATFIKK 192


>10_08_0936 -
           21679002-21679800,21679893-21680116,21681174-21681361,
           21681505-21682597
          Length = 767

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 14/53 (26%), Positives = 30/53 (56%), Gaps = 6/53 (11%)
 Frame = -1

Query: 662 SDAAIEAMNNQYXCNRPISVSYAFK------KDVKGERHGSAAERLLAAQKSI 522
           S++ + ++++ +    P++V Y         + ++G+ HGS  ERLLA +K +
Sbjct: 370 SNSLLSSLSSTWTSKPPLAVRYKLDTNALEMESMEGKSHGSTLERLLAWEKKL 422


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,870,439
Number of Sequences: 37544
Number of extensions: 156617
Number of successful extensions: 357
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 347
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 356
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2232933960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)