Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP13_T7_D01
         (804 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              23   4.4  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              23   4.4  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   7.7  

>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +1

Query: 241 QPGDVEGHRELVVNANFTFFQ 303
           Q G V+  REL +N   TFFQ
Sbjct: 79  QFGLVDDKRELSLNGMLTFFQ 99


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 9/44 (20%), Positives = 19/44 (43%)
 Frame = +1

Query: 232 RVVQPGDVEGHRELVVNANFTFFQGFLFVRCNKTRSPARGAPWG 363
           +  +  D+  +  + +N  F+   GF+ + C   + P    P G
Sbjct: 684 KYTRSADLSSYNCVPINVQFSVLYGFVIIEC---QEPVTNRPTG 724


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -1

Query: 291  EIRVHNEFPVPLHITGLHYPPE 226
            ++R H     P+H   +HY PE
Sbjct: 1385 KVRPHPTDNAPIHGYTIHYKPE 1406


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,654
Number of Sequences: 438
Number of extensions: 3551
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25489170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)