Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_T7_C15
(806 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L26290-1|AAA27981.1| 441|Caenorhabditis elegans clathrin-associ... 347 4e-96
AF099001-8|AAP13778.1| 435|Caenorhabditis elegans Dumpy : short... 347 4e-96
AF099001-7|AAP13777.1| 441|Caenorhabditis elegans Dumpy : short... 347 4e-96
AF003130-2|AAB54125.2| 426|Caenorhabditis elegans Adaptin, mu/m... 133 2e-31
Z83115-4|CAB05557.3| 422|Caenorhabditis elegans Hypothetical pr... 130 9e-31
L26291-1|AAA72418.1| 422|Caenorhabditis elegans protein ( Caeno... 130 2e-30
U41023-4|AAA82343.2| 414|Caenorhabditis elegans Adaptin, mu/med... 59 3e-09
Z83115-5|CAJ85757.1| 58|Caenorhabditis elegans Hypothetical pr... 52 5e-07
Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical pr... 35 0.060
Z93779-1|CAB07849.2| 2103|Caenorhabditis elegans Hypothetical pr... 31 0.97
Z78543-7|CAB01757.2| 2103|Caenorhabditis elegans Hypothetical pr... 31 0.97
Z66566-5|CAA91487.2| 2103|Caenorhabditis elegans Hypothetical pr... 31 0.97
Z47067-1|CAA87328.1| 776|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z75548-4|CAA99912.1| 117|Caenorhabditis elegans Hypothetical pr... 29 5.2
U41279-8|AAL02436.1| 307|Caenorhabditis elegans Hypothetical pr... 29 5.2
AF016685-9|AAG24149.1| 330|Caenorhabditis elegans Seven tm rece... 28 6.8
U41279-10|AAK31426.2| 308|Caenorhabditis elegans Hypothetical p... 28 9.0
AC006832-8|AAF40000.1| 465|Caenorhabditis elegans Hypothetical ... 28 9.0
>L26290-1|AAA27981.1| 441|Caenorhabditis elegans
clathrin-associated protein homologueprotein.
Length = 441
Score = 347 bits (854), Expect = 4e-96
Identities = 162/188 (86%), Positives = 173/188 (92%), Gaps = 2/188 (1%)
Frame = -3
Query: 639 QCVKLSKFETEHSXSFIPPDGEFELMRYRTTKDISLPFRVIPLVREVGRTKMEVKVVLKS 460
QCVKL+KFETEH+ SFIPPDGE+ELMRYRTTKDI LPFRVIPLVREV R KMEVKVV+KS
Sbjct: 254 QCVKLTKFETEHAISFIPPDGEYELMRYRTTKDIQLPFRVIPLVREVSRNKMEVKVVVKS 313
Query: 459 NFKPSLLGQKIEVKIPTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAE 280
NFKPSLL QK+EV+IPTP NTSGVQLIC+KGKAKYKA ENAIVWKIKRMAGMKE+Q+SAE
Sbjct: 314 NFKPSLLAQKLEVRIPTPPNTSGVQLICMKGKAKYKAGENAIVWKIKRMAGMKESQISAE 373
Query: 279 IELLETDT--KKKWTRPPISMGFEVPFAPSGFKVRYLKVFEPKLNYSDHDVIKWVRYIGR 106
I+LL T KKKW RPP+SM FEVPFAPSG KVRYLKVFEPKLNYSDHDVIKWVRYIGR
Sbjct: 374 IDLLSTGNVEKKKWNRPPVSMNFEVPFAPSGLKVRYLKVFEPKLNYSDHDVIKWVRYIGR 433
Query: 105 SGLYETRC 82
SGLYETRC
Sbjct: 434 SGLYETRC 441
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -1
Query: 788 GMPEGKFGINDKFVMXPKXR 729
GMPE KFGINDK + K +
Sbjct: 212 GMPECKFGINDKITIEGKSK 231
>AF099001-8|AAP13778.1| 435|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 23, isoform b protein.
Length = 435
Score = 347 bits (854), Expect = 4e-96
Identities = 162/188 (86%), Positives = 173/188 (92%), Gaps = 2/188 (1%)
Frame = -3
Query: 639 QCVKLSKFETEHSXSFIPPDGEFELMRYRTTKDISLPFRVIPLVREVGRTKMEVKVVLKS 460
QCVKL+KFETEH+ SFIPPDGE+ELMRYRTTKDI LPFRVIPLVREV R KMEVKVV+KS
Sbjct: 248 QCVKLTKFETEHAISFIPPDGEYELMRYRTTKDIQLPFRVIPLVREVSRNKMEVKVVVKS 307
Query: 459 NFKPSLLGQKIEVKIPTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAE 280
NFKPSLL QK+EV+IPTP NTSGVQLIC+KGKAKYKA ENAIVWKIKRMAGMKE+Q+SAE
Sbjct: 308 NFKPSLLAQKLEVRIPTPPNTSGVQLICMKGKAKYKAGENAIVWKIKRMAGMKESQISAE 367
Query: 279 IELLETDT--KKKWTRPPISMGFEVPFAPSGFKVRYLKVFEPKLNYSDHDVIKWVRYIGR 106
I+LL T KKKW RPP+SM FEVPFAPSG KVRYLKVFEPKLNYSDHDVIKWVRYIGR
Sbjct: 368 IDLLSTGNVEKKKWNRPPVSMNFEVPFAPSGLKVRYLKVFEPKLNYSDHDVIKWVRYIGR 427
Query: 105 SGLYETRC 82
SGLYETRC
Sbjct: 428 SGLYETRC 435
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -1
Query: 788 GMPEGKFGINDKFVMXPKXR 729
GMPE KFGINDK + K +
Sbjct: 206 GMPECKFGINDKITIEGKSK 225
>AF099001-7|AAP13777.1| 441|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 23, isoform a protein.
Length = 441
Score = 347 bits (854), Expect = 4e-96
Identities = 162/188 (86%), Positives = 173/188 (92%), Gaps = 2/188 (1%)
Frame = -3
Query: 639 QCVKLSKFETEHSXSFIPPDGEFELMRYRTTKDISLPFRVIPLVREVGRTKMEVKVVLKS 460
QCVKL+KFETEH+ SFIPPDGE+ELMRYRTTKDI LPFRVIPLVREV R KMEVKVV+KS
Sbjct: 254 QCVKLTKFETEHAISFIPPDGEYELMRYRTTKDIQLPFRVIPLVREVSRNKMEVKVVVKS 313
Query: 459 NFKPSLLGQKIEVKIPTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAE 280
NFKPSLL QK+EV+IPTP NTSGVQLIC+KGKAKYKA ENAIVWKIKRMAGMKE+Q+SAE
Sbjct: 314 NFKPSLLAQKLEVRIPTPPNTSGVQLICMKGKAKYKAGENAIVWKIKRMAGMKESQISAE 373
Query: 279 IELLETDT--KKKWTRPPISMGFEVPFAPSGFKVRYLKVFEPKLNYSDHDVIKWVRYIGR 106
I+LL T KKKW RPP+SM FEVPFAPSG KVRYLKVFEPKLNYSDHDVIKWVRYIGR
Sbjct: 374 IDLLSTGNVEKKKWNRPPVSMNFEVPFAPSGLKVRYLKVFEPKLNYSDHDVIKWVRYIGR 433
Query: 105 SGLYETRC 82
SGLYETRC
Sbjct: 434 SGLYETRC 441
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -1
Query: 788 GMPEGKFGINDKFVMXPKXR 729
GMPE KFGINDK + K +
Sbjct: 212 GMPECKFGINDKITIEGKSK 231
>AF003130-2|AAB54125.2| 426|Caenorhabditis elegans Adaptin,
mu/medium chain (clathrinassociated complex) protein 1
protein.
Length = 426
Score = 133 bits (321), Expect = 2e-31
Identities = 72/186 (38%), Positives = 104/186 (55%), Gaps = 1/186 (0%)
Frame = -3
Query: 639 QCVKLSKFETEHSXSFIPPDGEFELMRYRTTKDISLPFRVIPLVREVGRTKMEVKVVLKS 460
QCV+LS+F++E + SFIPPDGEFELM YR T + V V +++E V KS
Sbjct: 243 QCVRLSRFDSERTISFIPPDGEFELMSYRLTTQVKPLIWVEAAVERHAHSRVEYMVKAKS 302
Query: 459 NFKPSLLGQKIEVKIPTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAE 280
FK + +EV IP P + S + G AKY NAIVW I+ G +E + +
Sbjct: 303 QFKRQSVANHVEVIIPVPSDVSAPKFKTGAGTAKYVPELNAIVWSIRSFPGGREYIMRSS 362
Query: 279 IELLETDTKKKWTRPPISMGFEVP-FAPSGFKVRYLKVFEPKLNYSDHDVIKWVRYIGRS 103
L +++ RPPI++ FE+P + SG +VRYLK+ E S + + WVRY+ ++
Sbjct: 363 FMLPSIGSEELEGRPPINVKFEIPYYTTSGLQVRYLKIIEK----SGYQALPWVRYVTQN 418
Query: 102 GLYETR 85
G Y+ R
Sbjct: 419 GDYQMR 424
>Z83115-4|CAB05557.3| 422|Caenorhabditis elegans Hypothetical
protein K11D2.3a protein.
Length = 422
Score = 130 bits (315), Expect = 9e-31
Identities = 69/186 (37%), Positives = 100/186 (53%), Gaps = 1/186 (0%)
Frame = -3
Query: 639 QCVKLSKFETEHSXSFIPPDGEFELMRYRTTKDISLPFRVIPLVREVGRTKMEVKVVLKS 460
QCV+LS+F+T+ + SFIPPDG FELM YR T + + + +++ + KS
Sbjct: 239 QCVRLSRFDTDRTISFIPPDGAFELMSYRLTTVVKPLIWIETSIERHSHSRVSFIIKAKS 298
Query: 459 NFKPSLLGQKIEVKIPTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAE 280
FK +E+ IP P + + G KY ++A VW IK G KE L+A
Sbjct: 299 QFKRRSTANNVEIIIPVPSDADSPKFKTSIGSVKYTPEQSAFVWTIKNFPGGKEYLLTAH 358
Query: 279 IELLETDTKKKWTRPPISMGFEVP-FAPSGFKVRYLKVFEPKLNYSDHDVIKWVRYIGRS 103
+ L +++ RPPI + FE+P F SG +VRYLK+ E S + + WVRYI ++
Sbjct: 359 LSLPSVMSEESEGRPPIKVKFEIPYFTTSGIQVRYLKIIEK----SGYQALPWVRYITQN 414
Query: 102 GLYETR 85
G YE R
Sbjct: 415 GEYEMR 420
>L26291-1|AAA72418.1| 422|Caenorhabditis elegans protein (
Caenorhabditis elegans(unc-101) mRNA, complete cds. ).
Length = 422
Score = 130 bits (313), Expect = 2e-30
Identities = 68/186 (36%), Positives = 100/186 (53%), Gaps = 1/186 (0%)
Frame = -3
Query: 639 QCVKLSKFETEHSXSFIPPDGEFELMRYRTTKDISLPFRVIPLVREVGRTKMEVKVVLKS 460
QCV+LS+F+T+ + SFIPPDG FELM YR T + + + +++ + KS
Sbjct: 239 QCVRLSRFDTDRTISFIPPDGAFELMSYRLTTVVKPLIWIETSIERHSHSRVSFIIKAKS 298
Query: 459 NFKPSLLGQKIEVKIPTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAE 280
FK +E+ IP P + + G KY ++A VW IK G KE L+A
Sbjct: 299 QFKRRSTANNVEIIIPVPSDADSPKFKTSIGSVKYTPEQSAFVWTIKNFPGGKEYLLTAH 358
Query: 279 IELLETDTKKKWTRPPISMGFEVP-FAPSGFKVRYLKVFEPKLNYSDHDVIKWVRYIGRS 103
+ L +++ RPPI + FE+P F SG +VRYLK+ E + + + WVRYI ++
Sbjct: 359 LSLPSVMSEESEGRPPIKVKFEIPYFTTSGIQVRYLKIIEKR----GYQALPWVRYITQN 414
Query: 102 GLYETR 85
G YE R
Sbjct: 415 GEYEMR 420
>U41023-4|AAA82343.2| 414|Caenorhabditis elegans Adaptin, mu/medium
chain (clathrinassociated complex) protein 3 protein.
Length = 414
Score = 59.3 bits (137), Expect = 3e-09
Identities = 47/196 (23%), Positives = 87/196 (44%), Gaps = 4/196 (2%)
Frame = -3
Query: 660 LTTVGSTQCVKLSKFETEHSXSFIPPDGEFELMRYRTTKD--ISLPFRVIPLVR-EVGRT 490
L V CV+ ++E E SF+PPDG F L+ Y +++P V ++ +
Sbjct: 228 LDDVSFHPCVRYKRWENEKVLSFVPPDGNFRLLSYHIAAQNMVAIPIYVRQVISLKPNAG 287
Query: 489 KMEVKVVLKSNFKPSLLGQKIEVKIPTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMA 310
K+++ V K + L + + ++I P L+ G+ + + + W I ++
Sbjct: 288 KLDLTVGPKLSMGKVL--EDVVLEITMPKCVQNCNLVASHGRIAFDPTTKLLQWTIGKIE 345
Query: 309 GMKETQLSAEIELLETDTKKKWTRPPISMGFEV-PFAPSGFKVRYLKVFEPKLNYSDHDV 133
K + L + + T + PPIS+ F++ SG KV L ++ K +
Sbjct: 346 VGKPSTLKGSVAVSGTTVAE---NPPISLKFKINQLVLSGLKVNRLDMYGEK-----YKP 397
Query: 132 IKWVRYIGRSGLYETR 85
K V+YI ++G + R
Sbjct: 398 FKGVKYITKAGKFTIR 413
>Z83115-5|CAJ85757.1| 58|Caenorhabditis elegans Hypothetical
protein K11D2.3b protein.
Length = 58
Score = 52.0 bits (119), Expect = 5e-07
Identities = 26/53 (49%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Frame = -3
Query: 240 RPPISMGFEVP-FAPSGFKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETR 85
RPPI + FE+P F SG +VRYLK+ E S + + WVRYI ++G YE R
Sbjct: 8 RPPIKVKFEIPYFTTSGIQVRYLKIIEK----SGYQALPWVRYITQNGEYEMR 56
>Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical protein
C27H6.1 protein.
Length = 1657
Score = 35.1 bits (77), Expect = 0.060
Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Frame = -3
Query: 378 CLKGKAKYKASENAIVWKIKRM-----AGMKETQLSAEIELLETDTKKKWTRPPISMGFE 214
C G+AKY+ ++VW+I R+ A K L EL D + P + F
Sbjct: 1469 CAIGEAKYEHVYRSLVWRIPRLPEKHHAAYKSHLLKCRFELSSFDLMPEEFLPRCDVDFT 1528
Query: 213 VPFAP-SGFKVRYLKVFEPKLNYSDHD-VIKWVRYIGR 106
+P A S VR + V + + D D V K+VRY+ +
Sbjct: 1529 MPLATVSNTVVRSVSVEQ----HEDSDRVEKFVRYVAK 1562
>Z93779-1|CAB07849.2| 2103|Caenorhabditis elegans Hypothetical protein
T25C12.3 protein.
Length = 2103
Score = 31.1 bits (67), Expect = 0.97
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = -3
Query: 198 SGFKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYE 91
+G VR+L V+ + N +D D + +R I RSGLYE
Sbjct: 2015 TGSDVRHLLVYVTQTNPTDADPSELLRTIKRSGLYE 2050
>Z78543-7|CAB01757.2| 2103|Caenorhabditis elegans Hypothetical protein
T25C12.3 protein.
Length = 2103
Score = 31.1 bits (67), Expect = 0.97
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = -3
Query: 198 SGFKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYE 91
+G VR+L V+ + N +D D + +R I RSGLYE
Sbjct: 2015 TGSDVRHLLVYVTQTNPTDADPSELLRTIKRSGLYE 2050
>Z66566-5|CAA91487.2| 2103|Caenorhabditis elegans Hypothetical protein
T25C12.3 protein.
Length = 2103
Score = 31.1 bits (67), Expect = 0.97
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = -3
Query: 198 SGFKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYE 91
+G VR+L V+ + N +D D + +R I RSGLYE
Sbjct: 2015 TGSDVRHLLVYVTQTNPTDADPSELLRTIKRSGLYE 2050
>Z47067-1|CAA87328.1| 776|Caenorhabditis elegans Hypothetical
protein C43C3.1 protein.
Length = 776
Score = 29.9 bits (64), Expect = 2.2
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Frame = -3
Query: 570 ELMRYRTTKDISLPFRVIPLVREVGRTKMEVKVVLKSNFKPSLLGQKIEVKIPTPLNTSG 391
E +R R ++I +P V + + E+ +V K+N L Q EV+I T
Sbjct: 246 EEIRIRLEREIHRMNTTMPGVVCYDKLREELSIV-KNNLS-GLQKQVSEVEIRNNSLTQQ 303
Query: 390 VQLICLKGKAKYKASENAIVWKIKRMAGMKE--TQLSAEIELL 268
++ L+ K E+ + +KIK + M+E T +S E+E L
Sbjct: 304 IEFYRLEISENNKLFEDTLEFKIKEIEKMREQCTAISVELEKL 346
>Z75548-4|CAA99912.1| 117|Caenorhabditis elegans Hypothetical
protein R90.4 protein.
Length = 117
Score = 28.7 bits (61), Expect = 5.2
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = -3
Query: 573 FELMRYRTTKDISLPFRVIPLVREVGRTKMEVKVVLKSNFKPSLLGQKIEVKIPTPLNTS 394
F+ + + D + FRV RE+ R +V V K N+ L +K +KIP
Sbjct: 31 FDRLMEESRTDSNGQFRVSGSKREISRIDPKVNVYHKCNYN-GLCSKKFTIKIPKDYINR 89
Query: 393 GVQ 385
G Q
Sbjct: 90 GSQ 92
>U41279-8|AAL02436.1| 307|Caenorhabditis elegans Hypothetical
protein C17C3.12b protein.
Length = 307
Score = 28.7 bits (61), Expect = 5.2
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = -3
Query: 522 VIPLVREVGRTKMEVKVVLKSNFKPSLLGQKIEVKI 415
V PLVRE+ R K +LK F L+G KI+ K+
Sbjct: 55 VKPLVREMDRDARINKQLLKKAFDLKLMGLKIDPKL 90
>AF016685-9|AAG24149.1| 330|Caenorhabditis elegans Seven tm
receptor protein 87 protein.
Length = 330
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 455 KLLFSTTLTSILVRPTSRTSGMTRNGRDMSFVV 553
+L+FS T+ ++ S TSGM + D SFVV
Sbjct: 45 RLMFSYTIVEMVYSFLSFTSGMKAHSTDTSFVV 77
>U41279-10|AAK31426.2| 308|Caenorhabditis elegans Hypothetical
protein C17C3.12a protein.
Length = 308
Score = 27.9 bits (59), Expect = 9.0
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = -3
Query: 522 VIPLVREVGRTKMEVKVVLKSNFKPSLLGQKIEVK 418
V PLVRE+ R K +LK F L+G KI+ K
Sbjct: 55 VKPLVREMDRDARINKQLLKKAFDLKLMGLKIDPK 89
>AC006832-8|AAF40000.1| 465|Caenorhabditis elegans Hypothetical
protein ZK355.6 protein.
Length = 465
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = -3
Query: 405 LNTSGVQLICL--KGKAKYKASENAIVWKIKRM 313
LN S ++ CL GK +A + VWK+K+M
Sbjct: 335 LNMSSLEPFCLFIYGKVVLEAGDEEFVWKLKKM 367
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,050,865
Number of Sequences: 27780
Number of extensions: 428793
Number of successful extensions: 1392
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1277
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1380
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1977346024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -