Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_T7_C14
(809 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069429-1|AAL39574.1| 479|Drosophila melanogaster LD13887p pro... 36 0.050
AE014296-1669|AAF50260.2| 783|Drosophila melanogaster CG32043-P... 36 0.050
AE014296-1668|AAF50261.2| 783|Drosophila melanogaster CG32043-P... 36 0.050
AY094861-1|AAM11214.1| 362|Drosophila melanogaster RE22192p pro... 32 0.81
AE014297-3653|AAF56353.1| 362|Drosophila melanogaster CG7016-PA... 32 0.81
BT021383-1|AAX33531.1| 1117|Drosophila melanogaster LD37257p pro... 29 5.7
BT011076-1|AAR82742.1| 1191|Drosophila melanogaster SD08263p pro... 29 5.7
AY250783-1|AAP13278.1| 932|Drosophila melanogaster nucleoporin ... 29 5.7
AY250779-1|AAP13274.1| 932|Drosophila melanogaster nucleoporin ... 29 5.7
AY250773-1|AAP13268.1| 932|Drosophila melanogaster nucleoporin ... 29 5.7
AY250772-1|AAP13267.1| 932|Drosophila melanogaster nucleoporin ... 29 5.7
AY250770-1|AAP13266.1| 932|Drosophila melanogaster nucleoporin ... 29 5.7
AY250769-1|AAP13264.1| 932|Drosophila melanogaster nucleoporin ... 29 5.7
AY061106-1|AAL28654.1| 1177|Drosophila melanogaster LD09503p pro... 29 5.7
AE014297-3391|AAF56190.3| 1960|Drosophila melanogaster CG10198-P... 29 5.7
AE014297-2422|AAF55479.3| 2938|Drosophila melanogaster CG33547-P... 29 5.7
AE014296-2728|AAF49469.2| 1117|Drosophila melanogaster CG4877-PB... 29 5.7
AE014296-2727|AAF49470.3| 1117|Drosophila melanogaster CG4877-PA... 29 5.7
AY250782-1|AAP13277.1| 932|Drosophila melanogaster nucleoporin ... 29 7.5
AY250781-1|AAP13276.1| 932|Drosophila melanogaster nucleoporin ... 29 7.5
AY250780-1|AAP13275.1| 932|Drosophila melanogaster nucleoporin ... 29 7.5
AY250778-1|AAP13273.1| 932|Drosophila melanogaster nucleoporin ... 29 7.5
AY250777-1|AAP13272.1| 932|Drosophila melanogaster nucleoporin ... 29 7.5
AY250776-1|AAP13271.1| 932|Drosophila melanogaster nucleoporin ... 29 7.5
AY250775-1|AAP13270.1| 932|Drosophila melanogaster nucleoporin ... 29 7.5
AY250774-1|AAP13269.1| 932|Drosophila melanogaster nucleoporin ... 29 7.5
AY250771-1|AAP13265.1| 932|Drosophila melanogaster nucleoporin ... 29 7.5
AY051763-1|AAK93187.1| 805|Drosophila melanogaster LD29208p pro... 29 7.5
AE014298-1561|AAN09285.1| 805|Drosophila melanogaster CG1453-PE... 29 7.5
AE014298-1560|AAN09284.1| 805|Drosophila melanogaster CG1453-PD... 29 7.5
AE014298-1559|AAF48003.2| 805|Drosophila melanogaster CG1453-PC... 29 7.5
AE014298-1558|AAN09283.1| 805|Drosophila melanogaster CG1453-PB... 29 7.5
AE014298-1557|AAN09282.1| 805|Drosophila melanogaster CG1453-PA... 29 7.5
BT023940-1|ABB36444.1| 592|Drosophila melanogaster LP20233p pro... 29 9.9
AE014297-2291|AAF55377.2| 594|Drosophila melanogaster CG5225-PA... 29 9.9
>AY069429-1|AAL39574.1| 479|Drosophila melanogaster LD13887p
protein.
Length = 479
Score = 36.3 bits (80), Expect = 0.050
Identities = 19/49 (38%), Positives = 22/49 (44%)
Frame = -3
Query: 177 HPHGHPFHPQETTAPHMLVLYLPKAQDKNSSHPGLPKGEPNFAPYNYPP 31
HPH H H T PH L +L SSHP L P++YPP
Sbjct: 341 HPHPHAQHSHPHTLPHSLPHHLQPGTPTRSSHPQLQH------PHHYPP 383
>AE014296-1669|AAF50260.2| 783|Drosophila melanogaster CG32043-PB,
isoform B protein.
Length = 783
Score = 36.3 bits (80), Expect = 0.050
Identities = 19/49 (38%), Positives = 22/49 (44%)
Frame = -3
Query: 177 HPHGHPFHPQETTAPHMLVLYLPKAQDKNSSHPGLPKGEPNFAPYNYPP 31
HPH H H T PH L +L SSHP L P++YPP
Sbjct: 645 HPHPHAQHSHPHTLPHSLPHHLQPGTPTRSSHPQLQH------PHHYPP 687
>AE014296-1668|AAF50261.2| 783|Drosophila melanogaster CG32043-PA,
isoform A protein.
Length = 783
Score = 36.3 bits (80), Expect = 0.050
Identities = 19/49 (38%), Positives = 22/49 (44%)
Frame = -3
Query: 177 HPHGHPFHPQETTAPHMLVLYLPKAQDKNSSHPGLPKGEPNFAPYNYPP 31
HPH H H T PH L +L SSHP L P++YPP
Sbjct: 645 HPHPHAQHSHPHTLPHSLPHHLQPGTPTRSSHPQLQH------PHHYPP 687
>AY094861-1|AAM11214.1| 362|Drosophila melanogaster RE22192p
protein.
Length = 362
Score = 32.3 bits (70), Expect = 0.81
Identities = 23/77 (29%), Positives = 27/77 (35%)
Frame = -2
Query: 805 GGXGPGQAXPXSSLGGXGIXEVXXHGXGXGPPPPXXEFNPXRRPPXFKXPELXWKQRYQP 626
GG GP P G G G GPPPP +N PP P W P
Sbjct: 161 GGRGP---PPRPGFNGGGPPPPRPGWNGGGPPPPMPGWNGGGPPP----PRPGWNGGGPP 213
Query: 625 PLHPPXHHAITDEYLAY 575
P P + + E+ Y
Sbjct: 214 PPRPGWNGGMEQEWDNY 230
>AE014297-3653|AAF56353.1| 362|Drosophila melanogaster CG7016-PA
protein.
Length = 362
Score = 32.3 bits (70), Expect = 0.81
Identities = 23/77 (29%), Positives = 27/77 (35%)
Frame = -2
Query: 805 GGXGPGQAXPXSSLGGXGIXEVXXHGXGXGPPPPXXEFNPXRRPPXFKXPELXWKQRYQP 626
GG GP P G G G GPPPP +N PP P W P
Sbjct: 161 GGRGP---PPRPGFNGGGPPPPRPGWNGGGPPPPMPGWNGGGPPP----PRPGWNGGGPP 213
Query: 625 PLHPPXHHAITDEYLAY 575
P P + + E+ Y
Sbjct: 214 PPRPGWNGGMEQEWDNY 230
>BT021383-1|AAX33531.1| 1117|Drosophila melanogaster LD37257p
protein.
Length = 1117
Score = 29.5 bits (63), Expect = 5.7
Identities = 17/49 (34%), Positives = 20/49 (40%)
Frame = -3
Query: 162 PFHPQETTAPHMLVLYLPKAQDKNSSHPGLPKGEPNFAPYNYPPYRAYE 16
P PQ +PH L Q + HP +P PNFA P R E
Sbjct: 663 PLTPQRHASPHQLAQSQQVHQSPSQLHP-VPVAAPNFAVPQQPQPRRSE 710
>BT011076-1|AAR82742.1| 1191|Drosophila melanogaster SD08263p
protein.
Length = 1191
Score = 29.5 bits (63), Expect = 5.7
Identities = 14/37 (37%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = -2
Query: 403 NAASKLVSRHFEESLRLANQKRGERNNLT-WSIMHSL 296
++ +KLVS+HF ESL+ N E +++ WS++ +L
Sbjct: 627 DSGTKLVSKHFSESLKQRNAGLKEDYSVSVWSLLFAL 663
>AY250783-1|AAP13278.1| 932|Drosophila melanogaster nucleoporin
98-96 protein.
Length = 932
Score = 29.5 bits (63), Expect = 5.7
Identities = 14/37 (37%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = -2
Query: 403 NAASKLVSRHFEESLRLANQKRGERNNLT-WSIMHSL 296
++ +KLVS+HF ESL+ N E +++ WS++ +L
Sbjct: 368 DSGTKLVSKHFSESLKQRNAGLKEDYSVSVWSLLFAL 404
>AY250779-1|AAP13274.1| 932|Drosophila melanogaster nucleoporin
98-96 protein.
Length = 932
Score = 29.5 bits (63), Expect = 5.7
Identities = 14/37 (37%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = -2
Query: 403 NAASKLVSRHFEESLRLANQKRGERNNLT-WSIMHSL 296
++ +KLVS+HF ESL+ N E +++ WS++ +L
Sbjct: 368 DSGTKLVSKHFSESLKQRNAGLKEDYSVSVWSLLFAL 404
>AY250773-1|AAP13268.1| 932|Drosophila melanogaster nucleoporin
98-96 protein.
Length = 932
Score = 29.5 bits (63), Expect = 5.7
Identities = 14/37 (37%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = -2
Query: 403 NAASKLVSRHFEESLRLANQKRGERNNLT-WSIMHSL 296
++ +KLVS+HF ESL+ N E +++ WS++ +L
Sbjct: 368 DSGTKLVSKHFSESLKQRNAGLKEDYSVSVWSLLFAL 404
>AY250772-1|AAP13267.1| 932|Drosophila melanogaster nucleoporin
98-96 protein.
Length = 932
Score = 29.5 bits (63), Expect = 5.7
Identities = 14/37 (37%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = -2
Query: 403 NAASKLVSRHFEESLRLANQKRGERNNLT-WSIMHSL 296
++ +KLVS+HF ESL+ N E +++ WS++ +L
Sbjct: 368 DSGTKLVSKHFSESLKQRNAGLKEDYSVSVWSLLFAL 404
>AY250770-1|AAP13266.1| 932|Drosophila melanogaster nucleoporin
98-96 protein.
Length = 932
Score = 29.5 bits (63), Expect = 5.7
Identities = 14/37 (37%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = -2
Query: 403 NAASKLVSRHFEESLRLANQKRGERNNLT-WSIMHSL 296
++ +KLVS+HF ESL+ N E +++ WS++ +L
Sbjct: 368 DSGTKLVSKHFSESLKQRNAGLKEDYSVSVWSLLFAL 404
>AY250769-1|AAP13264.1| 932|Drosophila melanogaster nucleoporin
98-96 protein.
Length = 932
Score = 29.5 bits (63), Expect = 5.7
Identities = 14/37 (37%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = -2
Query: 403 NAASKLVSRHFEESLRLANQKRGERNNLT-WSIMHSL 296
++ +KLVS+HF ESL+ N E +++ WS++ +L
Sbjct: 368 DSGTKLVSKHFSESLKQRNAGLKEDYSVSVWSLLFAL 404
>AY061106-1|AAL28654.1| 1177|Drosophila melanogaster LD09503p
protein.
Length = 1177
Score = 29.5 bits (63), Expect = 5.7
Identities = 17/49 (34%), Positives = 20/49 (40%)
Frame = -3
Query: 162 PFHPQETTAPHMLVLYLPKAQDKNSSHPGLPKGEPNFAPYNYPPYRAYE 16
P PQ +PH L Q + HP +P PNFA P R E
Sbjct: 723 PLTPQRHASPHQLAQSQQVHQSPSQLHP-VPVAAPNFAVPQQPQPRRSE 770
>AE014297-3391|AAF56190.3| 1960|Drosophila melanogaster CG10198-PA
protein.
Length = 1960
Score = 29.5 bits (63), Expect = 5.7
Identities = 14/37 (37%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = -2
Query: 403 NAASKLVSRHFEESLRLANQKRGERNNLT-WSIMHSL 296
++ +KLVS+HF ESL+ N E +++ WS++ +L
Sbjct: 1396 DSGTKLVSKHFSESLKQRNAGLKEDYSVSVWSLLFAL 1432
>AE014297-2422|AAF55479.3| 2938|Drosophila melanogaster CG33547-PA
protein.
Length = 2938
Score = 29.5 bits (63), Expect = 5.7
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -3
Query: 180 IHPHGHPFHPQETTAPHMLVLYLPKAQDKNSSH 82
+HPH H +T P LV Y+ QDK+ SH
Sbjct: 1889 VHPHAHD---HTSTTPSSLVGYVRDHQDKSCSH 1918
>AE014296-2728|AAF49469.2| 1117|Drosophila melanogaster CG4877-PB,
isoform B protein.
Length = 1117
Score = 29.5 bits (63), Expect = 5.7
Identities = 17/49 (34%), Positives = 20/49 (40%)
Frame = -3
Query: 162 PFHPQETTAPHMLVLYLPKAQDKNSSHPGLPKGEPNFAPYNYPPYRAYE 16
P PQ +PH L Q + HP +P PNFA P R E
Sbjct: 663 PLTPQRHASPHQLAQSQQVHQSPSQLHP-VPVAAPNFAVPQQPQPRRSE 710
>AE014296-2727|AAF49470.3| 1117|Drosophila melanogaster CG4877-PA,
isoform A protein.
Length = 1117
Score = 29.5 bits (63), Expect = 5.7
Identities = 17/49 (34%), Positives = 20/49 (40%)
Frame = -3
Query: 162 PFHPQETTAPHMLVLYLPKAQDKNSSHPGLPKGEPNFAPYNYPPYRAYE 16
P PQ +PH L Q + HP +P PNFA P R E
Sbjct: 663 PLTPQRHASPHQLAQSQQVHQSPSQLHP-VPVAAPNFAVPQQPQPRRSE 710
>AY250782-1|AAP13277.1| 932|Drosophila melanogaster nucleoporin
98-96 protein.
Length = 932
Score = 29.1 bits (62), Expect = 7.5
Identities = 13/37 (35%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = -2
Query: 403 NAASKLVSRHFEESLRLANQKRGERNNLT-WSIMHSL 296
++ +KL+S+HF ESL+ N E +++ WS++ +L
Sbjct: 368 DSGTKLISKHFSESLKQRNAGLKEDYSVSVWSLLFAL 404
>AY250781-1|AAP13276.1| 932|Drosophila melanogaster nucleoporin
98-96 protein.
Length = 932
Score = 29.1 bits (62), Expect = 7.5
Identities = 13/37 (35%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = -2
Query: 403 NAASKLVSRHFEESLRLANQKRGERNNLT-WSIMHSL 296
++ +KL+S+HF ESL+ N E +++ WS++ +L
Sbjct: 368 DSGTKLISKHFSESLKQRNAGLKEDYSVSVWSLLFAL 404
>AY250780-1|AAP13275.1| 932|Drosophila melanogaster nucleoporin
98-96 protein.
Length = 932
Score = 29.1 bits (62), Expect = 7.5
Identities = 13/37 (35%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = -2
Query: 403 NAASKLVSRHFEESLRLANQKRGERNNLT-WSIMHSL 296
++ +KL+S+HF ESL+ N E +++ WS++ +L
Sbjct: 368 DSGTKLISKHFSESLKQRNAGLKEDYSVSVWSLLFAL 404
>AY250778-1|AAP13273.1| 932|Drosophila melanogaster nucleoporin
98-96 protein.
Length = 932
Score = 29.1 bits (62), Expect = 7.5
Identities = 13/37 (35%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = -2
Query: 403 NAASKLVSRHFEESLRLANQKRGERNNLT-WSIMHSL 296
++ +KL+S+HF ESL+ N E +++ WS++ +L
Sbjct: 368 DSGTKLISKHFSESLKQRNAGLKEDYSVSVWSLLFAL 404
>AY250777-1|AAP13272.1| 932|Drosophila melanogaster nucleoporin
98-96 protein.
Length = 932
Score = 29.1 bits (62), Expect = 7.5
Identities = 13/37 (35%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = -2
Query: 403 NAASKLVSRHFEESLRLANQKRGERNNLT-WSIMHSL 296
++ +KL+S+HF ESL+ N E +++ WS++ +L
Sbjct: 368 DSGTKLISKHFSESLKQRNAGLKEDYSVSVWSLLFAL 404
>AY250776-1|AAP13271.1| 932|Drosophila melanogaster nucleoporin
98-96 protein.
Length = 932
Score = 29.1 bits (62), Expect = 7.5
Identities = 13/37 (35%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = -2
Query: 403 NAASKLVSRHFEESLRLANQKRGERNNLT-WSIMHSL 296
++ +KL+S+HF ESL+ N E +++ WS++ +L
Sbjct: 368 DSGTKLISKHFSESLKQRNAGLKEDYSVSVWSLLFAL 404
>AY250775-1|AAP13270.1| 932|Drosophila melanogaster nucleoporin
98-96 protein.
Length = 932
Score = 29.1 bits (62), Expect = 7.5
Identities = 13/37 (35%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = -2
Query: 403 NAASKLVSRHFEESLRLANQKRGERNNLT-WSIMHSL 296
++ +KL+S+HF ESL+ N E +++ WS++ +L
Sbjct: 368 DSGTKLISKHFSESLKQRNAGLKEDYSVSVWSLLFAL 404
>AY250774-1|AAP13269.1| 932|Drosophila melanogaster nucleoporin
98-96 protein.
Length = 932
Score = 29.1 bits (62), Expect = 7.5
Identities = 13/37 (35%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = -2
Query: 403 NAASKLVSRHFEESLRLANQKRGERNNLT-WSIMHSL 296
++ +KL+S+HF ESL+ N E +++ WS++ +L
Sbjct: 368 DSGTKLISKHFSESLKQRNAGLKEDYSVSVWSLLFAL 404
>AY250771-1|AAP13265.1| 932|Drosophila melanogaster nucleoporin
98-96 protein.
Length = 932
Score = 29.1 bits (62), Expect = 7.5
Identities = 13/37 (35%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = -2
Query: 403 NAASKLVSRHFEESLRLANQKRGERNNLT-WSIMHSL 296
++ +KL+S+HF ESL+ N E +++ WS++ +L
Sbjct: 368 DSGTKLISKHFSESLKQRNAGLKEDYSVSVWSLLFAL 404
>AY051763-1|AAK93187.1| 805|Drosophila melanogaster LD29208p
protein.
Length = 805
Score = 29.1 bits (62), Expect = 7.5
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = -2
Query: 367 ESLRLANQKRGERNNLTWSIMHSLTPNRAAPAPEHDRLRVPTSERN 230
E + + + + E N+ H L PN APA + + R P S +
Sbjct: 625 EPIEITDDEEEEELNMVHPHSHQLHPNSHAPASQSNNQRAPASHHS 670
>AE014298-1561|AAN09285.1| 805|Drosophila melanogaster CG1453-PE,
isoform E protein.
Length = 805
Score = 29.1 bits (62), Expect = 7.5
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = -2
Query: 367 ESLRLANQKRGERNNLTWSIMHSLTPNRAAPAPEHDRLRVPTSERN 230
E + + + + E N+ H L PN APA + + R P S +
Sbjct: 625 EPIEITDDEEEEELNMVHPHSHQLHPNSHAPASQSNNQRAPASHHS 670
>AE014298-1560|AAN09284.1| 805|Drosophila melanogaster CG1453-PD,
isoform D protein.
Length = 805
Score = 29.1 bits (62), Expect = 7.5
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = -2
Query: 367 ESLRLANQKRGERNNLTWSIMHSLTPNRAAPAPEHDRLRVPTSERN 230
E + + + + E N+ H L PN APA + + R P S +
Sbjct: 625 EPIEITDDEEEEELNMVHPHSHQLHPNSHAPASQSNNQRAPASHHS 670
>AE014298-1559|AAF48003.2| 805|Drosophila melanogaster CG1453-PC,
isoform C protein.
Length = 805
Score = 29.1 bits (62), Expect = 7.5
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = -2
Query: 367 ESLRLANQKRGERNNLTWSIMHSLTPNRAAPAPEHDRLRVPTSERN 230
E + + + + E N+ H L PN APA + + R P S +
Sbjct: 625 EPIEITDDEEEEELNMVHPHSHQLHPNSHAPASQSNNQRAPASHHS 670
>AE014298-1558|AAN09283.1| 805|Drosophila melanogaster CG1453-PB,
isoform B protein.
Length = 805
Score = 29.1 bits (62), Expect = 7.5
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = -2
Query: 367 ESLRLANQKRGERNNLTWSIMHSLTPNRAAPAPEHDRLRVPTSERN 230
E + + + + E N+ H L PN APA + + R P S +
Sbjct: 625 EPIEITDDEEEEELNMVHPHSHQLHPNSHAPASQSNNQRAPASHHS 670
>AE014298-1557|AAN09282.1| 805|Drosophila melanogaster CG1453-PA,
isoform A protein.
Length = 805
Score = 29.1 bits (62), Expect = 7.5
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = -2
Query: 367 ESLRLANQKRGERNNLTWSIMHSLTPNRAAPAPEHDRLRVPTSERN 230
E + + + + E N+ H L PN APA + + R P S +
Sbjct: 625 EPIEITDDEEEEELNMVHPHSHQLHPNSHAPASQSNNQRAPASHHS 670
>BT023940-1|ABB36444.1| 592|Drosophila melanogaster LP20233p
protein.
Length = 592
Score = 28.7 bits (61), Expect = 9.9
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -3
Query: 177 HPHGHPFHPQETTAPHMLVLYLPKAQDKNSSH 82
HPH H HP T P ++ + LP + ++ H
Sbjct: 172 HPHSHHPHPPIVTPPIIVPIPLPPQKGEHGHH 203
>AE014297-2291|AAF55377.2| 594|Drosophila melanogaster CG5225-PA
protein.
Length = 594
Score = 28.7 bits (61), Expect = 9.9
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -3
Query: 177 HPHGHPFHPQETTAPHMLVLYLPKAQDKNSSH 82
HPH H HP T P ++ + LP + ++ H
Sbjct: 174 HPHSHHPHPPIVTPPIIVPIPLPPQKGEHGHH 205
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,207,716
Number of Sequences: 53049
Number of extensions: 686805
Number of successful extensions: 2761
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 2096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2727
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3798466620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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