Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_T7_C13
(814 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_03_0005 + 11568545-11569119,11569179-11569191 33 0.20
08_01_0600 - 5262573-5262773,5262850-5262952,5263050-5263180,526... 33 0.36
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 32 0.62
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 32 0.62
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332... 31 0.82
04_04_0009 + 22134160-22134696 31 1.4
06_01_1176 + 10112257-10113126 30 1.9
12_02_0954 - 24757417-24758214 30 2.5
07_01_0327 + 2289472-2289978,2290016-2290444,2290688-2290750,229... 30 2.5
02_05_0686 - 30900748-30902167,30903442-30904742 29 3.3
02_01_0381 - 2764331-2764342,2768966-2769907 29 3.3
09_02_0468 - 9608922-9610061 29 4.4
06_02_0257 - 13533689-13533714,13533799-13533925,13534013-135341... 29 4.4
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 25 4.8
11_06_0369 - 22760383-22760440,22761410-22761497,22761582-227616... 29 5.8
09_04_0368 + 17005231-17005437,17005707-17005963,17006061-170061... 29 5.8
03_05_0067 - 20460206-20460703,20461255-20461530 29 5.8
03_03_0278 - 16126803-16129049 29 5.8
02_04_0180 + 20696258-20698398,20698691-20698871,20698998-20699060 29 5.8
08_01_0193 + 1599970-1600503,1601488-1601919,1602010-1602147,160... 25 6.8
09_04_0318 - 16620177-16620582,16620686-16620765,16620873-166212... 28 7.7
07_03_0965 - 22996575-22999112,22999202-22999636,22999717-229998... 28 7.7
04_04_0053 + 22389227-22389613,22390528-22390981,22391618-223916... 28 7.7
03_01_0607 + 4464669-4465367,4466212-4467369,4468005-4469114,446... 28 7.7
>01_03_0005 + 11568545-11569119,11569179-11569191
Length = 195
Score = 33.5 bits (73), Expect = 0.20
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +3
Query: 687 PPPPXXKKKXGGGGXPPXFFFXXPPXXXXXGGGG 788
PPPP GGGG + PP GGGG
Sbjct: 70 PPPPSYPSGGGGGGGGGTVMYTSPPPPYSGGGGG 103
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/49 (34%), Positives = 19/49 (38%)
Frame = -1
Query: 796 FXPPPPPXXXXXGGXXKKXXGGXPPPPXFFFXXGGGGGGXXKKXXXAPP 650
+ PPPPP PPPP + GGGGGG PP
Sbjct: 54 YYPPPPPPVVTPTPQC-------PPPPSYPSGGGGGGGGGTVMYTSPPP 95
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = +3
Query: 684 PPPPPXXKKKXGGGGXPPXFFFXXPPXXXXXGGGGG 791
PPPP GGGG + PP GGGGG
Sbjct: 70 PPPPSYPSGGGGGGGGGTVMYTSPPPPYS--GGGGG 103
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/39 (41%), Positives = 17/39 (43%)
Frame = -1
Query: 796 FXPPPPPXXXXXGGXXKKXXGGXPPPPXFFFXXGGGGGG 680
+ PPPP GG G PPP GGGGGG
Sbjct: 90 YTSPPPPYSGGGGGSSTGGGGIYYPPPT---GGGGGGGG 125
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -1
Query: 784 PPPXXXXXGGXXKKXXGGXPPPPXFFFXXGGGGG 683
PPP GG GG PP GGGGG
Sbjct: 93 PPPPYSGGGGGSSTGGGGIYYPPPTGGGGGGGGG 126
>08_01_0600 -
5262573-5262773,5262850-5262952,5263050-5263180,
5263263-5263312,5265266-5265725,5266349-5266708
Length = 434
Score = 32.7 bits (71), Expect = 0.36
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +3
Query: 684 PPPPPXXKKKXGGGGXPPXFFFXXPP 761
PPPPP GGGG PP + PP
Sbjct: 3 PPPPPPQAGVAGGGGAPPQWGAIPPP 28
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 31.9 bits (69), Expect = 0.62
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = -1
Query: 787 PPPPXXXXXGGXXKKXXGGXPPPPXFFFXXGGGGGGXXKKXXXAPP 650
PPPP G GG PPP GG GG APP
Sbjct: 1163 PPPPAGFRGGTPPPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPAPP 1208
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 31.9 bits (69), Expect = 0.62
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -1
Query: 790 PPPPPXXXXXGGXXKKXXGGXPPPPXFFFXXGGGG 686
PPPPP G PPPP GGGG
Sbjct: 349 PPPPPPPAAPAAPRPPGPGPGPPPPPGAAGRGGGG 383
Score = 29.5 bits (63), Expect = 3.3
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 681 PPPPPPXXKKKXGGGGXPP 737
P PPPP GGGG PP
Sbjct: 368 PGPPPPPGAAGRGGGGPPP 386
Score = 28.3 bits (60), Expect = 7.7
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +3
Query: 684 PPPPPXXKKKXGGGGXPP 737
PPPPP + GGG PP
Sbjct: 370 PPPPPGAAGRGGGGPPPP 387
>01_01_0446 +
3321832-3322232,3322398-3322455,3322810-3323748,
3324504-3324654,3324740-3324818,3325826-3325934
Length = 578
Score = 31.5 bits (68), Expect = 0.82
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = -1
Query: 784 PPPXXXXXGGXXKKXXGGXPPPPXFFFXXGGGGGG 680
PP GG GG PP + GGGGGG
Sbjct: 375 PPSYDGGYGGRPMPGGGGPGAPPPYHGGGGGGGGG 409
>04_04_0009 + 22134160-22134696
Length = 178
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +3
Query: 681 PPPPPPXXKKKXGGGG 728
PPPPPP K GGGG
Sbjct: 64 PPPPPPSSSGKSGGGG 79
>06_01_1176 + 10112257-10113126
Length = 289
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -1
Query: 760 GGXXKKXXGGXPPPPXFFFXXGGGGGG 680
GG +K PPP F GGGGGG
Sbjct: 76 GGGCRKPKRPAPPPSSSFTGGGGGGGG 102
>12_02_0954 - 24757417-24758214
Length = 265
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = -1
Query: 790 PPPPPXXXXXGGXXKKXXGGXPPPPXFFFXXGGGGG 683
PPPPP G ++ PPP GGGG
Sbjct: 14 PPPPPPPRVVGVQQQQQQEAVVPPPPAMAAAAGGGG 49
>07_01_0327 +
2289472-2289978,2290016-2290444,2290688-2290750,
2290845-2291126
Length = 426
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -1
Query: 712 FFFXXGGGGGGXXKKXXXAPP 650
F F GGGGGG K APP
Sbjct: 24 FLFGYGGGGGGETKSLQCAPP 44
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +3
Query: 681 PPPPPPXXKKKXGGGGXPPXFFFXXPP 761
PPPPPP KK G PP PP
Sbjct: 364 PPPPPPPGGKKGGPPPPPPKGGASRPP 390
>02_01_0381 - 2764331-2764342,2768966-2769907
Length = 317
Score = 29.5 bits (63), Expect = 3.3
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +3
Query: 681 PPPPPPXXKKKXGGGG 728
PPPPPP + GGGG
Sbjct: 64 PPPPPPPNQPSAGGGG 79
Score = 28.7 bits (61), Expect = 5.8
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 681 PPPPPPXXKKKXGGGG 728
PPPPPP GGGG
Sbjct: 65 PPPPPPNQPSAGGGGG 80
>09_02_0468 - 9608922-9610061
Length = 379
Score = 29.1 bits (62), Expect = 4.4
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 681 PPPPPPXXKKKXGGGG 728
PPPPPP GGGG
Sbjct: 347 PPPPPPATTSNGGGGG 362
>06_02_0257 -
13533689-13533714,13533799-13533925,13534013-13534121,
13534193-13534272,13534758-13534979,13536070-13536318,
13537032-13537484,13539834-13540556
Length = 662
Score = 29.1 bits (62), Expect = 4.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 681 PPPPPPXXKKKXGGGGXP 734
PPPPPP GGG P
Sbjct: 64 PPPPPPPPSSAAAGGGGP 81
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 24.6 bits (51), Expect(2) = 4.8
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = +3
Query: 681 PPPPPPXXKKKXGGGGXPP 737
PPPPPP + PP
Sbjct: 569 PPPPPPLPQSNYASSQPPP 587
Score = 22.6 bits (46), Expect(2) = 4.8
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +3
Query: 654 GAXXXFXXXPPPPPP 698
G F PPPPPP
Sbjct: 556 GNKPAFSPPPPPPPP 570
>11_06_0369 -
22760383-22760440,22761410-22761497,22761582-22761649,
22761742-22761858,22761964-22762084,22762172-22762247,
22762336-22762435,22762524-22762615,22763514-22763664,
22764698-22764792,22764900-22765193
Length = 419
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 651 GGAXXXFXXXPPPPPPXXKKKXGGGG 728
G A PPPPPP GGGG
Sbjct: 42 GAASSESPATPPPPPPLMAALGGGGG 67
>09_04_0368 +
17005231-17005437,17005707-17005963,17006061-17006115,
17006196-17006276,17006357-17006453,17006560-17006627,
17006788-17006886,17007008-17007049,17007124-17007263,
17007882-17008018,17008275-17008444
Length = 450
Score = 28.7 bits (61), Expect = 5.8
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 681 PPPPPPXXKKKXGGGG 728
PPPPPP GGGG
Sbjct: 17 PPPPPPGSSSGRGGGG 32
>03_05_0067 - 20460206-20460703,20461255-20461530
Length = 257
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = -1
Query: 790 PPPPPXXXXXGGXXKKXXGGXPPPP 716
PPPPP G G PPPP
Sbjct: 25 PPPPPPQYFQGAHPPAAMWGQPPPP 49
>03_03_0278 - 16126803-16129049
Length = 748
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +3
Query: 630 KXNKXKXGGAXXXFXXXPPPPPPXXKKKXG-GGGXPPXFF 746
+ NK K G A PPPPPP ++ PP F+
Sbjct: 169 RGNKQKAGPATSSVRQRPPPPPPPPRQAPAPPPAKPPTFW 208
>02_04_0180 + 20696258-20698398,20698691-20698871,20698998-20699060
Length = 794
Score = 28.7 bits (61), Expect = 5.8
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +3
Query: 681 PPPPPPXXKKKXGGGGXP 734
PPPPPP + GG G P
Sbjct: 12 PPPPPPPFGRGGGGAGYP 29
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/28 (50%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Frame = -1
Query: 727 PPPPXFFFXXGGGGGGXXK--KXXXAPP 650
PPPP F GGGG G + K APP
Sbjct: 12 PPPPPPPFGRGGGGAGYPRGHKQLYAPP 39
>08_01_0193 +
1599970-1600503,1601488-1601919,1602010-1602147,
1602532-1602600
Length = 390
Score = 24.6 bits (51), Expect(2) = 6.8
Identities = 12/41 (29%), Positives = 12/41 (29%)
Frame = +3
Query: 681 PPPPPPXXKKKXGGGGXPPXFFFXXPPXXXXXGGGGGXKXP 803
PPPPPP G P G G G P
Sbjct: 21 PPPPPPPPLPPRGSPAPSENHTAISAPLLQPAGAGAGDAAP 61
Score = 22.2 bits (45), Expect(2) = 6.8
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +3
Query: 645 KXGGAXXXFXXXPPPPPP 698
+ GA PPPPPP
Sbjct: 6 RLAGAAAAAAAAPPPPPP 23
>09_04_0318 -
16620177-16620582,16620686-16620765,16620873-16621213,
16621298-16621559
Length = 362
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = +3
Query: 681 PPPPPPXXKKKXGGGGXPPXFFFXXPPXXXXXGGGGG 791
PPPPPP + + F PP GGGGG
Sbjct: 78 PPPPPPSSESRHLEAS-TRGFDVNRPPSSGGGGGGGG 113
>07_03_0965 -
22996575-22999112,22999202-22999636,22999717-22999801,
22999888-22999957,23000050-23000293,23000396-23000482,
23000655-23000706,23000830-23001226,23001324-23001648,
23001748-23001914,23002007-23002547
Length = 1646
Score = 28.3 bits (60), Expect = 7.7
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -1
Query: 736 GGXPPPPXFFFXXGGGGGG 680
GG PPPP GGGGG
Sbjct: 19 GGGPPPPRRRLRSSGGGGG 37
>04_04_0053 +
22389227-22389613,22390528-22390981,22391618-22391673,
22391757-22391887,22391976-22392072,22393329-22393484
Length = 426
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +3
Query: 681 PPPPPPXXKKKXGGGGXPPXFFFXXPPXXXXXGGGGG 791
PPPPPP K G P P G GG
Sbjct: 61 PPPPPPQYAKHFAAGPPPAAAAGRRTPTPPAPAGSGG 97
>03_01_0607 +
4464669-4465367,4466212-4467369,4468005-4469114,
4469273-4469314,4469496-4469572,4469671-4469755,
4469818-4469901,4469988-4470089,4470181-4470279,
4470794-4470919
Length = 1193
Score = 28.3 bits (60), Expect = 7.7
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -1
Query: 727 PPPPXFFFXXGGGGGGXXKK 668
PPPP GGGGGG ++
Sbjct: 51 PPPPHHLAPRGGGGGGGPRR 70
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,927,423
Number of Sequences: 37544
Number of extensions: 292487
Number of successful extensions: 4256
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1654
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3597
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2221181676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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