Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP13_T7_C11
         (835 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.             184   1e-48
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    25   0.86 
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   8.0  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   8.0  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   8.0  

>AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.
          Length = 133

 Score =  184 bits (447), Expect = 1e-48
 Identities = 87/101 (86%), Positives = 89/101 (88%)
 Frame = -2

Query: 702 PRGFFPTXVFGYGSFGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 523
           P   F     G  + GIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI
Sbjct: 33  PEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 92

Query: 522 TALAPSTMKIKIIAPPERKYSVWIGGSILASLFTFQQMWIS 400
           TALAPSTMKIKIIAPPE+KYSVWIGGSILASL TFQQMWIS
Sbjct: 93  TALAPSTMKIKIIAPPEKKYSVWIGGSILASLSTFQQMWIS 133



 Score = 54.8 bits (126), Expect = 9e-10
 Identities = 26/31 (83%), Positives = 26/31 (83%)
 Frame = -1

Query: 796 EMAPXASXSSLENSYEFPDGQVITIGNERFR 704
           EMA  AS SSLE SYE PDGQVITIGNERFR
Sbjct: 1   EMATAASSSSLEKSYELPDGQVITIGNERFR 31



 Score = 35.1 bits (77), Expect = 8e-04
 Identities = 14/15 (93%), Positives = 14/15 (93%)
 Frame = -3

Query: 704 CPEAFFQPSFLGMEA 660
           CPEA FQPSFLGMEA
Sbjct: 32  CPEALFQPSFLGMEA 46


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 25.0 bits (52), Expect = 0.86
 Identities = 21/62 (33%), Positives = 30/62 (48%)
 Frame = -2

Query: 636 NSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSV 457
           N  +K D DI++  Y + V      MYP  +  M+K I+    +  KI I  P E K  +
Sbjct: 342 NKELKYD-DIKEMEYLDKVFKETLRMYPPASILMRKAISDYTFNDTKITI--PKEMK--I 396

Query: 456 WI 451
           WI
Sbjct: 397 WI 398


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -1

Query: 583 RIVRWYHHVPWNRRPYAK 530
           RI+ +YH    +++PY K
Sbjct: 424 RIIDYYHSYKMHQKPYNK 441


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -1

Query: 583 RIVRWYHHVPWNRRPYAK 530
           RI+ +YH    +++PY K
Sbjct: 424 RIIDYYHSYKMHQKPYNK 441


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 658 EASIPKNXGWKK 693
           E  IPK+ GW+K
Sbjct: 210 EKKIPKSSGWRK 221


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,622
Number of Sequences: 438
Number of extensions: 4665
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26702940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)