Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP13_T7_C08
         (859 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    32   0.026
Z18889-1|CAA79327.1|  274|Anopheles gambiae trypsin protein.           27   0.97 
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    26   1.3  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    26   1.7  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          24   5.1  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    24   6.8  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    23   9.0  

>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 31.9 bits (69), Expect = 0.026
 Identities = 16/41 (39%), Positives = 18/41 (43%)
 Frame = -2

Query: 438 PGCXXXXXXXXXXXRHKXTHTGEKKXECRVCNRRFMRSDHL 316
           P C           RH   HTGEK   C VC  RF +S+ L
Sbjct: 243 PHCTYASPDKFKLTRHMRIHTGEKPYSCDVCFARFTQSNSL 283



 Score = 24.6 bits (51), Expect = 3.9
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -2

Query: 393 HKXTHTGEKKXECRVC 346
           H  THTGEK  +C  C
Sbjct: 230 HIRTHTGEKPFQCPHC 245



 Score = 23.8 bits (49), Expect = 6.8
 Identities = 10/26 (38%), Positives = 11/26 (42%)
 Frame = -2

Query: 393 HKXTHTGEKKXECRVCNRRFMRSDHL 316
           H  TH GEK   C  C    +   HL
Sbjct: 345 HAKTHEGEKCYRCEYCPYASISMRHL 370



 Score = 23.4 bits (48), Expect = 9.0
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -2

Query: 393 HKXTHTGEKKXECRVCNRRF 334
           H  TH+ ++  +C VC R F
Sbjct: 145 HLKTHSEDRPHKCVVCERGF 164


>Z18889-1|CAA79327.1|  274|Anopheles gambiae trypsin protein.
          Length = 274

 Score = 26.6 bits (56), Expect = 0.97
 Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
 Frame = -3

Query: 530 GGEKIXXKWS-TXXKXTARTHTGERTVPVARGPXASGGS 417
           GG  +  KW  T    TA   T   TVP+     ASGG+
Sbjct: 74  GGSVLSSKWVLTAAHCTAGRSTSSLTVPLGTSRHASGGT 112


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -3

Query: 479 RTHTGERTVPVARGPXASGGSRAPTXCPG 393
           R H GE+ +P   GP    G+  P   PG
Sbjct: 334 RGHKGEKGLPGQPGPRGRDGNFGPVGLPG 362


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
          protein.
          Length = 151

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
 Frame = -1

Query: 79 YC-YCIVYR*YDSKKLN*TFCTKKKKK 2
          YC YC  Y  +DS  +  T CT +K K
Sbjct: 5  YCDYCDTYLTHDSPSVRKTHCTGRKHK 31


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 24.2 bits (50), Expect = 5.1
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -3

Query: 671 PETGXPGXXLSXPGGXXXPXPXA 603
           P+ G PG  L+ PGG     P A
Sbjct: 537 PDGGSPGATLATPGGTKARPPSA 559


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 23.8 bits (49), Expect = 6.8
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 468 RGANRSGGAWPGC 430
           R + RSGG WP C
Sbjct: 259 RRSPRSGGRWPSC 271


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 23.4 bits (48), Expect = 9.0
 Identities = 13/35 (37%), Positives = 15/35 (42%)
 Frame = +3

Query: 579 ARGPP*PXGXRXGPXAAPRGT*XPARXPGLRXPXG 683
           A G P   G +  P  +  G   P   PGLR P G
Sbjct: 85  APGLPGSKGVKGDPGLSMVGPPGPKGNPGLRGPKG 119


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 518,974
Number of Sequences: 2352
Number of extensions: 7438
Number of successful extensions: 26
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 91372671
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)