Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP13_T7_B21
         (779 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73424-3|CAA97781.2| 1150|Caenorhabditis elegans Hypothetical pr...    29   4.9  
Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical pr...    28   6.5  

>Z73424-3|CAA97781.2| 1150|Caenorhabditis elegans Hypothetical
           protein C44B9.4 protein.
          Length = 1150

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -2

Query: 712 LPXDFGYINPDHQIPDSIHQPPPDLTSISINPL 614
           LP D  Y N    +P+++   PP+  S S+NP+
Sbjct: 93  LPDDNFYCNRCRNLPENVRLFPPEKCSPSVNPV 125


>Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical
           protein ZK287.4 protein.
          Length = 1208

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 29/85 (34%), Positives = 38/85 (44%), Gaps = 9/85 (10%)
 Frame = -2

Query: 685 PDHQIPDSIHQPPPDLTSISINPL--------TPY*KEFA-PGLKPPXSSEAPSAYLTPS 533
           P H I  S   PPPD   IS NP+        TP    +  P L PP ++ +P   L P 
Sbjct: 652 PTHYIVPSQSSPPPDPYVIS-NPIPTLSPTAGTPSFNIYPYPSLPPPTTTISPLPTLLPP 710

Query: 532 SLGMXKGVSPPYFQVNDESQASRLI 458
           ++      SPP    N++S  SR I
Sbjct: 711 NISYV--TSPP---DNNDSPCSRSI 730


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,789,770
Number of Sequences: 27780
Number of extensions: 320629
Number of successful extensions: 897
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 863
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 897
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)