Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_T7_B20
(797 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic ri... 205 2e-52
BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, larg... 205 2e-52
BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, larg... 205 2e-52
BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, larg... 205 2e-52
BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, larg... 205 2e-52
BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, larg... 205 2e-52
BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, larg... 205 2e-52
BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, larg... 205 2e-52
BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, larg... 205 2e-52
BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, larg... 205 2e-52
BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, larg... 205 2e-52
BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, larg... 205 2e-52
AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0 va... 205 2e-52
AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein. 205 2e-52
BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, larg... 203 5e-52
AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0 va... 202 2e-51
AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein. 200 5e-51
BC104645-1|AAI04646.1| 157|Homo sapiens RPLP0 protein protein. 139 9e-33
BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein. 64 7e-10
BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein. 64 7e-10
AB007187-1|BAA25845.1| 93|Homo sapiens ribosomal protein P0 pr... 57 8e-08
BC006504-1|AAH06504.1| 239|Homo sapiens mRNA turnover 4 homolog... 37 0.097
BC003013-1|AAH03013.1| 239|Homo sapiens mRNA turnover 4 homolog... 37 0.097
AY303790-1|AAP68821.1| 239|Homo sapiens acidic ribosomal protei... 37 0.097
AL035413-12|CAI22233.1| 239|Homo sapiens mRNA turnover 4 homolo... 37 0.097
AK027569-1|BAB55205.1| 239|Homo sapiens protein ( Homo sapiens ... 37 0.097
AF173378-1|AAD52608.1| 239|Homo sapiens 60S acidic ribosomal pr... 37 0.097
M91669-1|AAA35605.1| 1532|Homo sapiens autoantigen protein. 33 1.6
BC004478-1|AAH04478.1| 393|Homo sapiens COL17A1 protein protein. 33 1.6
AL138761-6|CAM13376.1| 417|Homo sapiens collagen type XVII alph... 33 1.6
AL138761-5|CAC00589.1| 1497|Homo sapiens collagen type XVII alph... 33 1.6
AL138761-4|CAI12398.1| 1415|Homo sapiens collagen type XVII alph... 33 1.6
U76604-1|AAB51499.1| 1497|Homo sapiens 180 kDa bullous pemphigoi... 32 2.8
BX000688-9|CAI18606.1| 961|Homo sapiens gamma-aminobutyric acid... 30 8.4
BC053670-1|AAH53670.1| 568|Homo sapiens CES3 protein protein. 30 8.4
AY358609-1|AAQ88972.1| 571|Homo sapiens carboxylesterase Hlo pr... 30 8.4
AL662826-9|CAI17390.1| 961|Homo sapiens gamma-aminobutyric acid... 30 8.4
AL645936-8|CAI18017.1| 961|Homo sapiens gamma-aminobutyric acid... 30 8.4
AL031983-8|CAA21453.1| 961|Homo sapiens gamma-aminobutyric acid... 30 8.4
AK097538-1|BAC05093.1| 207|Homo sapiens protein ( Homo sapiens ... 30 8.4
AJ225028-1|CAA12359.1| 961|Homo sapiens GABA-B receptor protein. 30 8.4
AJ012288-1|CAA09980.1| 961|Homo sapiens GABA-BR1 protein. 30 8.4
AJ012185-1|CAA09939.1| 961|Homo sapiens GABAB receptor, subunit... 30 8.4
AJ010170-1|CAA09031.1| 930|Homo sapiens gababr1 protein. 30 8.4
AF301005-1|AAG23962.1| 578|Homo sapiens gamma-aminobutyric acid... 30 8.4
AF099148-1|AAC98508.1| 961|Homo sapiens GABA-B1a receptor protein. 30 8.4
>M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P0 mRNA, complete cds. ).
Length = 317
Score = 205 bits (500), Expect = 2e-52
Identities = 105/202 (51%), Positives = 129/202 (63%), Gaps = 1/202 (0%)
Frame = -2
Query: 727 IAPLSVVIPAHNTGXGPEKTXFFQALXIPTKISKGTIEIINDVHILKPGDKVGAXEATLL 548
IAP V +PA NTG GPEKT FFQAL I TKIS+GTIEI++DV ++K GDKVGA EATLL
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLL 175
Query: 547 NMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIA 368
NMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+A
Sbjct: 176 NMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVA 235
Query: 367 SAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKF-XXXXXXXXXXXXXXXXXXX 191
S PHSI NG+K +L +K F+ DPS F
Sbjct: 236 SVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPVAAATTAAPAAAAAP 295
Query: 190 XXXXXXXXXXXSDDDMGFGLFD 125
SD+DMGFGLFD
Sbjct: 296 AKVEAKEESEESDEDMGFGLFD 317
>BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 205 bits (500), Expect = 2e-52
Identities = 105/202 (51%), Positives = 129/202 (63%), Gaps = 1/202 (0%)
Frame = -2
Query: 727 IAPLSVVIPAHNTGXGPEKTXFFQALXIPTKISKGTIEIINDVHILKPGDKVGAXEATLL 548
IAP V +PA NTG GPEKT FFQAL I TKIS+GTIEI++DV ++K GDKVGA EATLL
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLL 175
Query: 547 NMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIA 368
NMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+A
Sbjct: 176 NMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVA 235
Query: 367 SAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKF-XXXXXXXXXXXXXXXXXXX 191
S PHSI NG+K +L +K F+ DPS F
Sbjct: 236 SVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPVAAATTAAPAAAAAP 295
Query: 190 XXXXXXXXXXXSDDDMGFGLFD 125
SD+DMGFGLFD
Sbjct: 296 AKVEAKEESEESDEDMGFGLFD 317
>BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 205 bits (500), Expect = 2e-52
Identities = 105/202 (51%), Positives = 129/202 (63%), Gaps = 1/202 (0%)
Frame = -2
Query: 727 IAPLSVVIPAHNTGXGPEKTXFFQALXIPTKISKGTIEIINDVHILKPGDKVGAXEATLL 548
IAP V +PA NTG GPEKT FFQAL I TKIS+GTIEI++DV ++K GDKVGA EATLL
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLL 175
Query: 547 NMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIA 368
NMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+A
Sbjct: 176 NMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVA 235
Query: 367 SAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKF-XXXXXXXXXXXXXXXXXXX 191
S PHSI NG+K +L +K F+ DPS F
Sbjct: 236 SVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPVAAATTAAPAAAAAP 295
Query: 190 XXXXXXXXXXXSDDDMGFGLFD 125
SD+DMGFGLFD
Sbjct: 296 AKVEAKEESEESDEDMGFGLFD 317
>BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 205 bits (500), Expect = 2e-52
Identities = 105/202 (51%), Positives = 129/202 (63%), Gaps = 1/202 (0%)
Frame = -2
Query: 727 IAPLSVVIPAHNTGXGPEKTXFFQALXIPTKISKGTIEIINDVHILKPGDKVGAXEATLL 548
IAP V +PA NTG GPEKT FFQAL I TKIS+GTIEI++DV ++K GDKVGA EATLL
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLL 175
Query: 547 NMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIA 368
NMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+A
Sbjct: 176 NMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVA 235
Query: 367 SAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKF-XXXXXXXXXXXXXXXXXXX 191
S PHSI NG+K +L +K F+ DPS F
Sbjct: 236 SVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPVAAATTAAPAAAAAP 295
Query: 190 XXXXXXXXXXXSDDDMGFGLFD 125
SD+DMGFGLFD
Sbjct: 296 AKVEAKEESEESDEDMGFGLFD 317
>BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 205 bits (500), Expect = 2e-52
Identities = 105/202 (51%), Positives = 129/202 (63%), Gaps = 1/202 (0%)
Frame = -2
Query: 727 IAPLSVVIPAHNTGXGPEKTXFFQALXIPTKISKGTIEIINDVHILKPGDKVGAXEATLL 548
IAP V +PA NTG GPEKT FFQAL I TKIS+GTIEI++DV ++K GDKVGA EATLL
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLL 175
Query: 547 NMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIA 368
NMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+A
Sbjct: 176 NMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVA 235
Query: 367 SAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKF-XXXXXXXXXXXXXXXXXXX 191
S PHSI NG+K +L +K F+ DPS F
Sbjct: 236 SVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPVAAATTAAPAAAAAP 295
Query: 190 XXXXXXXXXXXSDDDMGFGLFD 125
SD+DMGFGLFD
Sbjct: 296 AKVEAKEESEESDEDMGFGLFD 317
>BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 205 bits (500), Expect = 2e-52
Identities = 105/202 (51%), Positives = 129/202 (63%), Gaps = 1/202 (0%)
Frame = -2
Query: 727 IAPLSVVIPAHNTGXGPEKTXFFQALXIPTKISKGTIEIINDVHILKPGDKVGAXEATLL 548
IAP V +PA NTG GPEKT FFQAL I TKIS+GTIEI++DV ++K GDKVGA EATLL
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLL 175
Query: 547 NMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIA 368
NMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+A
Sbjct: 176 NMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVA 235
Query: 367 SAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKF-XXXXXXXXXXXXXXXXXXX 191
S PHSI NG+K +L +K F+ DPS F
Sbjct: 236 SVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPVAAATTAAPAAAAAP 295
Query: 190 XXXXXXXXXXXSDDDMGFGLFD 125
SD+DMGFGLFD
Sbjct: 296 AKVEAKEESEESDEDMGFGLFD 317
>BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 205 bits (500), Expect = 2e-52
Identities = 105/202 (51%), Positives = 129/202 (63%), Gaps = 1/202 (0%)
Frame = -2
Query: 727 IAPLSVVIPAHNTGXGPEKTXFFQALXIPTKISKGTIEIINDVHILKPGDKVGAXEATLL 548
IAP V +PA NTG GPEKT FFQAL I TKIS+GTIEI++DV ++K GDKVGA EATLL
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLL 175
Query: 547 NMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIA 368
NMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+A
Sbjct: 176 NMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVA 235
Query: 367 SAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKF-XXXXXXXXXXXXXXXXXXX 191
S PHSI NG+K +L +K F+ DPS F
Sbjct: 236 SVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPVAAATTAAPAAAAAP 295
Query: 190 XXXXXXXXXXXSDDDMGFGLFD 125
SD+DMGFGLFD
Sbjct: 296 AKVEAKEESEESDEDMGFGLFD 317
>BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 205 bits (500), Expect = 2e-52
Identities = 105/202 (51%), Positives = 129/202 (63%), Gaps = 1/202 (0%)
Frame = -2
Query: 727 IAPLSVVIPAHNTGXGPEKTXFFQALXIPTKISKGTIEIINDVHILKPGDKVGAXEATLL 548
IAP V +PA NTG GPEKT FFQAL I TKIS+GTIEI++DV ++K GDKVGA EATLL
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLL 175
Query: 547 NMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIA 368
NMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+A
Sbjct: 176 NMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVA 235
Query: 367 SAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKF-XXXXXXXXXXXXXXXXXXX 191
S PHSI NG+K +L +K F+ DPS F
Sbjct: 236 SVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPVAAATTAAPAAAAAP 295
Query: 190 XXXXXXXXXXXSDDDMGFGLFD 125
SD+DMGFGLFD
Sbjct: 296 AKVEAKEESEESDEDMGFGLFD 317
>BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 205 bits (500), Expect = 2e-52
Identities = 105/202 (51%), Positives = 129/202 (63%), Gaps = 1/202 (0%)
Frame = -2
Query: 727 IAPLSVVIPAHNTGXGPEKTXFFQALXIPTKISKGTIEIINDVHILKPGDKVGAXEATLL 548
IAP V +PA NTG GPEKT FFQAL I TKIS+GTIEI++DV ++K GDKVGA EATLL
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLL 175
Query: 547 NMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIA 368
NMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+A
Sbjct: 176 NMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVA 235
Query: 367 SAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKF-XXXXXXXXXXXXXXXXXXX 191
S PHSI NG+K +L +K F+ DPS F
Sbjct: 236 SVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPVAAATTAAPAAAAAP 295
Query: 190 XXXXXXXXXXXSDDDMGFGLFD 125
SD+DMGFGLFD
Sbjct: 296 AKVEAKEESEESDEDMGFGLFD 317
>BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 205 bits (500), Expect = 2e-52
Identities = 105/202 (51%), Positives = 129/202 (63%), Gaps = 1/202 (0%)
Frame = -2
Query: 727 IAPLSVVIPAHNTGXGPEKTXFFQALXIPTKISKGTIEIINDVHILKPGDKVGAXEATLL 548
IAP V +PA NTG GPEKT FFQAL I TKIS+GTIEI++DV ++K GDKVGA EATLL
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLL 175
Query: 547 NMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIA 368
NMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+A
Sbjct: 176 NMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVA 235
Query: 367 SAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKF-XXXXXXXXXXXXXXXXXXX 191
S PHSI NG+K +L +K F+ DPS F
Sbjct: 236 SVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPVAAATTAAPAAAAAP 295
Query: 190 XXXXXXXXXXXSDDDMGFGLFD 125
SD+DMGFGLFD
Sbjct: 296 AKVEAKEESEESDEDMGFGLFD 317
>BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 205 bits (500), Expect = 2e-52
Identities = 105/202 (51%), Positives = 129/202 (63%), Gaps = 1/202 (0%)
Frame = -2
Query: 727 IAPLSVVIPAHNTGXGPEKTXFFQALXIPTKISKGTIEIINDVHILKPGDKVGAXEATLL 548
IAP V +PA NTG GPEKT FFQAL I TKIS+GTIEI++DV ++K GDKVGA EATLL
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLL 175
Query: 547 NMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIA 368
NMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+A
Sbjct: 176 NMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVA 235
Query: 367 SAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKF-XXXXXXXXXXXXXXXXXXX 191
S PHSI NG+K +L +K F+ DPS F
Sbjct: 236 SVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPVAAATTAAPAAAAAP 295
Query: 190 XXXXXXXXXXXSDDDMGFGLFD 125
SD+DMGFGLFD
Sbjct: 296 AKVEAKEESEESDEDMGFGLFD 317
>BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 205 bits (500), Expect = 2e-52
Identities = 105/202 (51%), Positives = 129/202 (63%), Gaps = 1/202 (0%)
Frame = -2
Query: 727 IAPLSVVIPAHNTGXGPEKTXFFQALXIPTKISKGTIEIINDVHILKPGDKVGAXEATLL 548
IAP V +PA NTG GPEKT FFQAL I TKIS+GTIEI++DV ++K GDKVGA EATLL
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLL 175
Query: 547 NMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIA 368
NMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+A
Sbjct: 176 NMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVA 235
Query: 367 SAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKF-XXXXXXXXXXXXXXXXXXX 191
S PHSI NG+K +L +K F+ DPS F
Sbjct: 236 SVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPVAAATTAAPAAAAAP 295
Query: 190 XXXXXXXXXXXSDDDMGFGLFD 125
SD+DMGFGLFD
Sbjct: 296 AKVEAKEESEESDEDMGFGLFD 317
>AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 205 bits (500), Expect = 2e-52
Identities = 105/202 (51%), Positives = 129/202 (63%), Gaps = 1/202 (0%)
Frame = -2
Query: 727 IAPLSVVIPAHNTGXGPEKTXFFQALXIPTKISKGTIEIINDVHILKPGDKVGAXEATLL 548
IAP V +PA NTG GPEKT FFQAL I TKIS+GTIEI++DV ++K GDKVGA EATLL
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLL 175
Query: 547 NMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIA 368
NMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+A
Sbjct: 176 NMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVA 235
Query: 367 SAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKF-XXXXXXXXXXXXXXXXXXX 191
S PHSI NG+K +L +K F+ DPS F
Sbjct: 236 SVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPVAAATTAAPAAAAAP 295
Query: 190 XXXXXXXXXXXSDDDMGFGLFD 125
SD+DMGFGLFD
Sbjct: 296 AKVEAKEESEESDEDMGFGLFD 317
>AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein.
Length = 317
Score = 205 bits (500), Expect = 2e-52
Identities = 105/202 (51%), Positives = 129/202 (63%), Gaps = 1/202 (0%)
Frame = -2
Query: 727 IAPLSVVIPAHNTGXGPEKTXFFQALXIPTKISKGTIEIINDVHILKPGDKVGAXEATLL 548
IAP V +PA NTG GPEKT FFQAL I TKIS+GTIEI++DV ++K GDKVGA EATLL
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLL 175
Query: 547 NMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIA 368
NMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+A
Sbjct: 176 NMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVA 235
Query: 367 SAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKF-XXXXXXXXXXXXXXXXXXX 191
S PHSI NG+K +L +K F+ DPS F
Sbjct: 236 SVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPVAAATTAAPAAAAAP 295
Query: 190 XXXXXXXXXXXSDDDMGFGLFD 125
SD+DMGFGLFD
Sbjct: 296 AKVEAKEESEESDEDMGFGLFD 317
>BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 203 bits (496), Expect = 5e-52
Identities = 104/202 (51%), Positives = 129/202 (63%), Gaps = 1/202 (0%)
Frame = -2
Query: 727 IAPLSVVIPAHNTGXGPEKTXFFQALXIPTKISKGTIEIINDVHILKPGDKVGAXEATLL 548
IAP V +PA NTG GPEKT FFQAL I TKIS+GTIEI++DV ++K GDKVGA EATLL
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLL 175
Query: 547 NMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIA 368
NMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+A
Sbjct: 176 NMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVA 235
Query: 367 SAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKF-XXXXXXXXXXXXXXXXXXX 191
S PHSI NG++ +L +K F+ DPS F
Sbjct: 236 SVPHSIINGYERVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPVAAATTAAPAAAAAP 295
Query: 190 XXXXXXXXXXXSDDDMGFGLFD 125
SD+DMGFGLFD
Sbjct: 296 AKVEAKEESEESDEDMGFGLFD 317
>AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 202 bits (492), Expect = 2e-51
Identities = 104/202 (51%), Positives = 128/202 (63%), Gaps = 1/202 (0%)
Frame = -2
Query: 727 IAPLSVVIPAHNTGXGPEKTXFFQALXIPTKISKGTIEIINDVHILKPGDKVGAXEATLL 548
IAP V +PA NTG GPEKT F QAL I TKIS+GTIEI++DV ++K GDKVGA EATLL
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFSQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLL 175
Query: 547 NMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIA 368
NMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+A
Sbjct: 176 NMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVA 235
Query: 367 SAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKF-XXXXXXXXXXXXXXXXXXX 191
S PHSI NG+K +L +K F+ DPS F
Sbjct: 236 SVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPVAAATTAAPAAAAAP 295
Query: 190 XXXXXXXXXXXSDDDMGFGLFD 125
SD+DMGFGLFD
Sbjct: 296 AKVEAKEESEESDEDMGFGLFD 317
>AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein.
Length = 317
Score = 200 bits (488), Expect = 5e-51
Identities = 103/202 (50%), Positives = 127/202 (62%), Gaps = 1/202 (0%)
Frame = -2
Query: 727 IAPLSVVIPAHNTGXGPEKTXFFQALXIPTKISKGTIEIINDVHILKPGDKVGAXEATLL 548
IAP V +PA NTG GPEKT FFQAL I TKIS+GTIEI++DV ++K GDKVGA EATLL
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLL 175
Query: 547 NMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIA 368
NMLNISPFS+GLV++QV+D+G+I+ PE+LD E L ++F GV NVA++ L GYPT+A
Sbjct: 176 NMLNISPFSFGLVIQQVFDNGSIYNPEVLDKTEETLHSRFLEGVRNVASVCLQTGYPTVA 235
Query: 367 SAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKF-XXXXXXXXXXXXXXXXXXX 191
S PHSI NG+K +L +K F+ DPS F
Sbjct: 236 SVPHSIINGYKRVLALSVETDYTFPLAENVKAFLADPSAFVAAAPVAADTTAAPAAAAAP 295
Query: 190 XXXXXXXXXXXSDDDMGFGLFD 125
SD+DMGFGLFD
Sbjct: 296 AKVEAKEESEESDEDMGFGLFD 317
>BC104645-1|AAI04646.1| 157|Homo sapiens RPLP0 protein protein.
Length = 157
Score = 139 bits (337), Expect = 9e-33
Identities = 74/156 (47%), Positives = 92/156 (58%), Gaps = 1/156 (0%)
Frame = -2
Query: 589 KPGDKVGAXEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVAN 410
K GDKVGA EATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV N
Sbjct: 2 KTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRN 61
Query: 409 VAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKF-XXXXX 233
VA++ L IGYPT+AS PHSI NG+K +L +K F+ DPS F
Sbjct: 62 VASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPV 121
Query: 232 XXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 125
SD+DMGFGLFD
Sbjct: 122 AAATTAAPAAAAAPAKVEAKEESEESDEDMGFGLFD 157
>BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein.
Length = 255
Score = 63.7 bits (148), Expect = 7e-10
Identities = 29/40 (72%), Positives = 32/40 (80%)
Frame = -2
Query: 727 IAPLSVVIPAHNTGXGPEKTXFFQALXIPTKISKGTIEII 608
IAP V +PA NTG GPEKT FFQAL I TKIS+GTIEI+
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEIL 155
Score = 61.3 bits (142), Expect = 4e-09
Identities = 37/100 (37%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Frame = -2
Query: 421 GVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKF-X 245
GV NVA++ L IGYPT+AS PHSI NG+K +L +K F+ DPS F
Sbjct: 156 GVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVA 215
Query: 244 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 125
SD+DMGFGLFD
Sbjct: 216 AAPVAAATTAAPAAAAAPAKVEAKEESEESDEDMGFGLFD 255
>BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein.
Length = 254
Score = 63.7 bits (148), Expect = 7e-10
Identities = 29/40 (72%), Positives = 32/40 (80%)
Frame = -2
Query: 727 IAPLSVVIPAHNTGXGPEKTXFFQALXIPTKISKGTIEII 608
IAP V +PA NTG GPEKT FFQAL I TKIS+GTIEI+
Sbjct: 115 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEIL 154
Score = 61.3 bits (142), Expect = 4e-09
Identities = 37/100 (37%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Frame = -2
Query: 421 GVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKF-X 245
GV NVA++ L IGYPT+AS PHSI NG+K +L +K F+ DPS F
Sbjct: 155 GVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVA 214
Query: 244 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 125
SD+DMGFGLFD
Sbjct: 215 AAPVAAATTAAPAAAAAPAKVEAKEESEESDEDMGFGLFD 254
>AB007187-1|BAA25845.1| 93|Homo sapiens ribosomal protein P0
protein.
Length = 93
Score = 56.8 bits (131), Expect = 8e-08
Identities = 27/58 (46%), Positives = 34/58 (58%)
Frame = -2
Query: 421 GVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKF 248
GV NVA++ L IGYPT+AS PHSI NG+K +L +K F+ DPS F
Sbjct: 1 GVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAF 58
>BC006504-1|AAH06504.1| 239|Homo sapiens mRNA turnover 4 homolog
(S. cerevisiae) protein.
Length = 239
Score = 36.7 bits (81), Expect = 0.097
Identities = 16/69 (23%), Positives = 36/69 (52%)
Frame = -2
Query: 652 LXIPTKISKGTIEIINDVHILKPGDKVGAXEATLLNMLNISPFSYGLVVKQVYDSGTIFA 473
L +PT + +G + +++D + K GD + +A +L + + + +K ++DS +
Sbjct: 156 LGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRF 215
Query: 472 PEILDIKPE 446
++ D PE
Sbjct: 216 QQMGDDLPE 224
>BC003013-1|AAH03013.1| 239|Homo sapiens mRNA turnover 4 homolog
(S. cerevisiae) protein.
Length = 239
Score = 36.7 bits (81), Expect = 0.097
Identities = 16/69 (23%), Positives = 36/69 (52%)
Frame = -2
Query: 652 LXIPTKISKGTIEIINDVHILKPGDKVGAXEATLLNMLNISPFSYGLVVKQVYDSGTIFA 473
L +PT + +G + +++D + K GD + +A +L + + + +K ++DS +
Sbjct: 156 LGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRF 215
Query: 472 PEILDIKPE 446
++ D PE
Sbjct: 216 QQMGDDLPE 224
>AY303790-1|AAP68821.1| 239|Homo sapiens acidic ribosomal protein
PO-like protein.
Length = 239
Score = 36.7 bits (81), Expect = 0.097
Identities = 16/69 (23%), Positives = 36/69 (52%)
Frame = -2
Query: 652 LXIPTKISKGTIEIINDVHILKPGDKVGAXEATLLNMLNISPFSYGLVVKQVYDSGTIFA 473
L +PT + +G + +++D + K GD + +A +L + + + +K ++DS +
Sbjct: 156 LGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRF 215
Query: 472 PEILDIKPE 446
++ D PE
Sbjct: 216 QQMGDDLPE 224
>AL035413-12|CAI22233.1| 239|Homo sapiens mRNA turnover 4 homolog
(S. cerevisiae) protein.
Length = 239
Score = 36.7 bits (81), Expect = 0.097
Identities = 16/69 (23%), Positives = 36/69 (52%)
Frame = -2
Query: 652 LXIPTKISKGTIEIINDVHILKPGDKVGAXEATLLNMLNISPFSYGLVVKQVYDSGTIFA 473
L +PT + +G + +++D + K GD + +A +L + + + +K ++DS +
Sbjct: 156 LGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRF 215
Query: 472 PEILDIKPE 446
++ D PE
Sbjct: 216 QQMGDDLPE 224
>AK027569-1|BAB55205.1| 239|Homo sapiens protein ( Homo sapiens
cDNA FLJ14663 fis, clone NT2RP2002862, weakly similar to
60S ACIDIC RIBOSOMAL PROTEIN P0. ).
Length = 239
Score = 36.7 bits (81), Expect = 0.097
Identities = 16/69 (23%), Positives = 36/69 (52%)
Frame = -2
Query: 652 LXIPTKISKGTIEIINDVHILKPGDKVGAXEATLLNMLNISPFSYGLVVKQVYDSGTIFA 473
L +PT + +G + +++D + K GD + +A +L + + + +K ++DS +
Sbjct: 156 LGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRF 215
Query: 472 PEILDIKPE 446
++ D PE
Sbjct: 216 QQMGDDLPE 224
>AF173378-1|AAD52608.1| 239|Homo sapiens 60S acidic ribosomal
protein PO protein.
Length = 239
Score = 36.7 bits (81), Expect = 0.097
Identities = 16/69 (23%), Positives = 36/69 (52%)
Frame = -2
Query: 652 LXIPTKISKGTIEIINDVHILKPGDKVGAXEATLLNMLNISPFSYGLVVKQVYDSGTIFA 473
L +PT + +G + +++D + K GD + +A +L + + + +K ++DS +
Sbjct: 156 LGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRF 215
Query: 472 PEILDIKPE 446
++ D PE
Sbjct: 216 QQMGDDLPE 224
>M91669-1|AAA35605.1| 1532|Homo sapiens autoantigen protein.
Length = 1532
Score = 32.7 bits (71), Expect = 1.6
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = +3
Query: 405 ATLATPAWNLARRSSGLMSRISGAKIVPESYTCLTTRPYENGEMFNMLRRVASXAPTLSP 584
A L + W+ + M + +S + L T Y G +F + +AS +PTL P
Sbjct: 249 ANLPSHVWSSTLPAGSSMGTYHN-NMTTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHP 307
Query: 585 GFKMCTSL 608
G +S+
Sbjct: 308 GLSTSSSV 315
>BC004478-1|AAH04478.1| 393|Homo sapiens COL17A1 protein protein.
Length = 393
Score = 32.7 bits (71), Expect = 1.6
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = +3
Query: 405 ATLATPAWNLARRSSGLMSRISGAKIVPESYTCLTTRPYENGEMFNMLRRVASXAPTLSP 584
A L + W+ + M + +S + L T Y G +F + +AS +PTL P
Sbjct: 214 ANLPSHVWSSTLPAGSSMGTYHN-NMTTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHP 272
Query: 585 GFKMCTSL 608
G +S+
Sbjct: 273 GLSTSSSV 280
>AL138761-6|CAM13376.1| 417|Homo sapiens collagen type XVII alpha 1
protein.
Length = 417
Score = 32.7 bits (71), Expect = 1.6
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = +3
Query: 405 ATLATPAWNLARRSSGLMSRISGAKIVPESYTCLTTRPYENGEMFNMLRRVASXAPTLSP 584
A L + W+ + M + +S + L T Y G +F + +AS +PTL P
Sbjct: 214 ANLPSHVWSSTLPAGSSMGTYHN-NMTTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHP 272
Query: 585 GFKMCTSL 608
G +S+
Sbjct: 273 GLSTSSSV 280
>AL138761-5|CAC00589.1| 1497|Homo sapiens collagen type XVII alpha 1
protein.
Length = 1497
Score = 32.7 bits (71), Expect = 1.6
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = +3
Query: 405 ATLATPAWNLARRSSGLMSRISGAKIVPESYTCLTTRPYENGEMFNMLRRVASXAPTLSP 584
A L + W+ + M + +S + L T Y G +F + +AS +PTL P
Sbjct: 214 ANLPSHVWSSTLPAGSSMGTYHN-NMTTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHP 272
Query: 585 GFKMCTSL 608
G +S+
Sbjct: 273 GLSTSSSV 280
>AL138761-4|CAI12398.1| 1415|Homo sapiens collagen type XVII alpha 1
protein.
Length = 1415
Score = 32.7 bits (71), Expect = 1.6
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = +3
Query: 405 ATLATPAWNLARRSSGLMSRISGAKIVPESYTCLTTRPYENGEMFNMLRRVASXAPTLSP 584
A L + W+ + M + +S + L T Y G +F + +AS +PTL P
Sbjct: 214 ANLPSHVWSSTLPAGSSMGTYHN-NMTTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHP 272
Query: 585 GFKMCTSL 608
G +S+
Sbjct: 273 GLSTSSSV 280
>U76604-1|AAB51499.1| 1497|Homo sapiens 180 kDa bullous pemphigoid
antigen 2/type XVII collagen protein.
Length = 1497
Score = 31.9 bits (69), Expect = 2.8
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 489 ESYTCLTTRPYENGEMFNMLRRVASXAPTLSPGFKMCTSL 608
+S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 241 QSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>BX000688-9|CAI18606.1| 961|Homo sapiens gamma-aminobutyric acid
(GABA) B receptor, 1 protein.
Length = 961
Score = 30.3 bits (65), Expect = 8.4
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = -3
Query: 783 LVGSGQXLETKSKSXWSGPLPHCQLSFPPTTPASVQRRXXFSRLF 649
LVGS + + S+ WS P PHCQ++ TP S +R LF
Sbjct: 137 LVGSSRSI--CSQGQWSTPKPHCQVN---RTPHSERRAVYIGALF 176
>BC053670-1|AAH53670.1| 568|Homo sapiens CES3 protein protein.
Length = 568
Score = 30.3 bits (65), Expect = 8.4
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = -2
Query: 571 GAXEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALS 395
G+ ++++ L +SP + GL + + SG I P I+D P L K +AN A S
Sbjct: 228 GSAGGSIISGLVLSPVAAGLFHRAITQSGVITTPGIIDSHPWPLAQK----IANTLACS 282
>AY358609-1|AAQ88972.1| 571|Homo sapiens carboxylesterase Hlo
protein.
Length = 571
Score = 30.3 bits (65), Expect = 8.4
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = -2
Query: 571 GAXEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALS 395
G+ ++++ L +SP + GL + + SG I P I+D P L K +AN A S
Sbjct: 228 GSAGGSIISGLVLSPVAAGLFHRAITQSGVITTPGIIDSHPWPLAQK----IANTLACS 282
>AL662826-9|CAI17390.1| 961|Homo sapiens gamma-aminobutyric acid
(GABA) B receptor, 1 protein.
Length = 961
Score = 30.3 bits (65), Expect = 8.4
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = -3
Query: 783 LVGSGQXLETKSKSXWSGPLPHCQLSFPPTTPASVQRRXXFSRLF 649
LVGS + + S+ WS P PHCQ++ TP S +R LF
Sbjct: 137 LVGSSRSI--CSQGQWSTPKPHCQVN---RTPHSERRAVYIGALF 176
>AL645936-8|CAI18017.1| 961|Homo sapiens gamma-aminobutyric acid
(GABA) B receptor, 1 protein.
Length = 961
Score = 30.3 bits (65), Expect = 8.4
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = -3
Query: 783 LVGSGQXLETKSKSXWSGPLPHCQLSFPPTTPASVQRRXXFSRLF 649
LVGS + + S+ WS P PHCQ++ TP S +R LF
Sbjct: 137 LVGSSRSI--CSQGQWSTPKPHCQVN---RTPHSERRAVYIGALF 176
>AL031983-8|CAA21453.1| 961|Homo sapiens gamma-aminobutyric acid
(GABA) B receptor, 1 protein.
Length = 961
Score = 30.3 bits (65), Expect = 8.4
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = -3
Query: 783 LVGSGQXLETKSKSXWSGPLPHCQLSFPPTTPASVQRRXXFSRLF 649
LVGS + + S+ WS P PHCQ++ TP S +R LF
Sbjct: 137 LVGSSRSI--CSQGQWSTPKPHCQVN---RTPHSERRAVYIGALF 176
>AK097538-1|BAC05093.1| 207|Homo sapiens protein ( Homo sapiens
cDNA FLJ40219 fis, clone TESTI2021637, moderately
similar to LIVER CARBOXYLESTERASE PRECURSOR (EC
3.1.1.1). ).
Length = 207
Score = 30.3 bits (65), Expect = 8.4
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = -2
Query: 571 GAXEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALS 395
G+ ++++ L +SP + GL + + SG I P I+D P L K +AN A S
Sbjct: 85 GSAGGSIISGLVLSPVAAGLFHRAITQSGVITTPGIIDSHPWPLAQK----IANTLACS 139
>AJ225028-1|CAA12359.1| 961|Homo sapiens GABA-B receptor protein.
Length = 961
Score = 30.3 bits (65), Expect = 8.4
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = -3
Query: 783 LVGSGQXLETKSKSXWSGPLPHCQLSFPPTTPASVQRRXXFSRLF 649
LVGS + + S+ WS P PHCQ++ TP S +R LF
Sbjct: 137 LVGSSRSI--CSQGQWSTPKPHCQVN---RTPHSERRAVYIGALF 176
>AJ012288-1|CAA09980.1| 961|Homo sapiens GABA-BR1 protein.
Length = 961
Score = 30.3 bits (65), Expect = 8.4
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = -3
Query: 783 LVGSGQXLETKSKSXWSGPLPHCQLSFPPTTPASVQRRXXFSRLF 649
LVGS + + S+ WS P PHCQ++ TP S +R LF
Sbjct: 137 LVGSSRSI--CSQGQWSTPKPHCQVN---RTPHSERRAVYIGALF 176
>AJ012185-1|CAA09939.1| 961|Homo sapiens GABAB receptor, subunit 1a
protein.
Length = 961
Score = 30.3 bits (65), Expect = 8.4
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = -3
Query: 783 LVGSGQXLETKSKSXWSGPLPHCQLSFPPTTPASVQRRXXFSRLF 649
LVGS + + S+ WS P PHCQ++ TP S +R LF
Sbjct: 137 LVGSSRSI--CSQGQWSTPKPHCQVN---RTPHSERRAVYIGALF 176
>AJ010170-1|CAA09031.1| 930|Homo sapiens gababr1 protein.
Length = 930
Score = 30.3 bits (65), Expect = 8.4
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = -3
Query: 783 LVGSGQXLETKSKSXWSGPLPHCQLSFPPTTPASVQRRXXFSRLF 649
LVGS + + S+ WS P PHCQ++ TP S +R LF
Sbjct: 137 LVGSSRSI--CSQGQWSTPKPHCQVN---RTPHSERRAVYIGALF 176
>AF301005-1|AAG23962.1| 578|Homo sapiens gamma-aminobutyric acid
receptor GABA-B1e protein.
Length = 578
Score = 30.3 bits (65), Expect = 8.4
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = -3
Query: 783 LVGSGQXLETKSKSXWSGPLPHCQLSFPPTTPASVQRRXXFSRLF 649
LVGS + + S+ WS P PHCQ++ TP S +R LF
Sbjct: 137 LVGSSRSI--CSQGQWSTPKPHCQVN---RTPHSERRAVYIGALF 176
>AF099148-1|AAC98508.1| 961|Homo sapiens GABA-B1a receptor protein.
Length = 961
Score = 30.3 bits (65), Expect = 8.4
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = -3
Query: 783 LVGSGQXLETKSKSXWSGPLPHCQLSFPPTTPASVQRRXXFSRLF 649
LVGS + + S+ WS P PHCQ++ TP S +R LF
Sbjct: 137 LVGSSRSI--CSQGQWSTPKPHCQVN---RTPHSERRAVYIGALF 176
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,614,877
Number of Sequences: 237096
Number of extensions: 2116610
Number of successful extensions: 4630
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 4257
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4609
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9813323168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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