Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP13_T7_B20
         (797 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    25   1.1  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    25   1.1  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    24   1.4  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    23   3.3  

>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -2

Query: 535 ISPFSYGLVVKQVYDSGTIFAP 470
           ISP + GLV + +  SGT+ AP
Sbjct: 264 ISPVTRGLVRRGILQSGTLNAP 285


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -2

Query: 535 ISPFSYGLVVKQVYDSGTIFAP 470
           ISP + GLV + +  SGT+ AP
Sbjct: 264 ISPVTRGLVRRGILQSGTLNAP 285


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 15/60 (25%), Positives = 24/60 (40%)
 Frame = -3

Query: 762 LETKSKSXWSGPLPHCQLSFPPTTPASVQRRXXFSRLFXSLPRFQRVLLKSSTMYTS*SP 583
           L+  S    S P P   L      PA    R  F+R       F ++L    T++++ +P
Sbjct: 306 LKRPSDGATSEPFPFLMLPLGAGRPAFWSLRKAFARKKTDYSSFGKILATEPTLFSNVTP 365


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 11/41 (26%), Positives = 17/41 (41%)
 Frame = +3

Query: 594 MCTSLMISIVPFEILVGIXRAWKKXVFSGPXPVLWAGMTTD 716
           +C   ++ +  +  L      WK     GP PV + G T D
Sbjct: 8   LCGIAVLFLALYYYLTSTFDFWKSRGVVGPKPVPFFGTTKD 48


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,150
Number of Sequences: 438
Number of extensions: 3873
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25246416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)