BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_T7_B18
(737 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_03_0005 + 11568545-11569119,11569179-11569191 32 0.41
06_03_1506 + 30641428-30642168 32 0.55
02_04_0400 - 22608519-22608844,22609044-22609122 31 0.72
07_01_0725 - 5532803-5533324,5533631-5533657,5534285-5534398,553... 31 0.95
12_01_0838 - 7830944-7831444 31 1.3
02_05_0686 - 30900748-30902167,30903442-30904742 30 1.7
09_01_0112 + 1737438-1737777,1738441-1738511,1738974-1739052,174... 30 2.2
07_01_0176 - 1244704-1245102 29 2.9
10_08_0608 + 19184722-19185224,19185331-19185410,19186048-191862... 25 3.2
06_02_0257 - 13533689-13533714,13533799-13533925,13534013-135341... 29 3.9
01_06_1670 - 39007402-39008229,39008320-39008567,39009159-390093... 29 3.9
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332... 29 3.9
06_01_0601 + 4337575-4340149,4340566-4340978 24 4.3
07_03_0559 + 19475893-19476783 29 5.1
03_01_0023 + 198414-198968 29 5.1
09_06_0148 - 21214460-21214561,21214993-21215339,21215428-212155... 28 6.7
09_02_0057 - 3697255-3698116,3698191-3698351,3698442-3698636,369... 28 6.7
07_03_1136 + 24218601-24218734,24218769-24219906 28 6.7
07_03_0560 + 19479597-19480667 28 6.7
07_03_0177 - 14770777-14772045 28 6.7
06_03_0790 - 24636805-24637770 28 6.7
06_03_0750 - 24140988-24141037,24141108-24141345,24142158-241422... 28 6.7
03_02_0436 + 8427018-8427707,8429005-8429544 28 6.7
12_02_1174 - 26696869-26698191 24 7.7
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 28 8.9
>01_03_0005 + 11568545-11569119,11569179-11569191
Length = 195
Score = 32.3 bits (70), Expect = 0.41
Identities = 21/66 (31%), Positives = 23/66 (34%), Gaps = 2/66 (3%)
Frame = -1
Query: 653 GGGXXXXXXXXXXXXGGGXXXXXXXGGGXXFFFFFFXXPXGGGGGG--XXXXGGGXXXXX 480
GGG GG GGG ++ P GGGGGG GGG
Sbjct: 83 GGGGTVMYTSPPPPYSGGGGGSSTGGGG-----IYYPPPTGGGGGGGGGWQQGGGGGGAY 137
Query: 479 XXXPPP 462
PPP
Sbjct: 138 PTPPPP 143
>06_03_1506 + 30641428-30642168
Length = 246
Score = 31.9 bits (69), Expect = 0.55
Identities = 17/53 (32%), Positives = 19/53 (35%)
Frame = -1
Query: 653 GGGXXXXXXXXXXXXGGGXXXXXXXGGGXXFFFFFFXXPXGGGGGGXXXXGGG 495
GGG GGG G G + + P GGGGG GGG
Sbjct: 169 GGGVNGGGGSGGGGGGGGGASGYRYGAGYGKGYGYGGGPGGGGGGAGGGGGGG 221
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = -1
Query: 608 GGGXXXXXXXGGGXXFFFFFFXXPXGGGGGGXXXXGGG 495
GGG G G + + GGGGGG GGG
Sbjct: 75 GGGYGSGGGEGNGAYGQGYGYGSGNGGGGGGGYGGGGG 112
>02_04_0400 - 22608519-22608844,22609044-22609122
Length = 134
Score = 31.5 bits (68), Expect = 0.72
Identities = 21/67 (31%), Positives = 21/67 (31%)
Frame = -1
Query: 665 KXXXGGGXXXXXXXXXXXXGGGXXXXXXXGGGXXFFFFFFXXPXGGGGGGXXXXGGGXXX 486
K GGG GGG GGG GGGGGG GGG
Sbjct: 30 KQGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGRGGGGGGGGGGGGGGGGGGGGGGGGG 89
Query: 485 XXXXXPP 465
PP
Sbjct: 90 GGGYYPP 96
Score = 27.9 bits (59), Expect = 8.9
Identities = 20/64 (31%), Positives = 20/64 (31%)
Frame = -1
Query: 653 GGGXXXXXXXXXXXXGGGXXXXXXXGGGXXFFFFFFXXPXGGGGGGXXXXGGGXXXXXXX 474
GGG GGG GGG GGGGGG GGG
Sbjct: 40 GGGGGGGGGGGGGGGGGGGGGGGGRGGGGG-------GGGGGGGGGGGGGGGGGGGGGGG 92
Query: 473 XPPP 462
PP
Sbjct: 93 YYPP 96
>07_01_0725 -
5532803-5533324,5533631-5533657,5534285-5534398,
5534564-5534731,5535951-5536193,5537178-5537261,
5537357-5538117,5539637-5539730,5540633-5540899,
5541311-5541316,5542538-5542657
Length = 801
Score = 31.1 bits (67), Expect = 0.95
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = -1
Query: 608 GGGXXXXXXXGGGXXFFFFFFXXPXGGGGGGXXXXGGG 495
GGG GGG F F G GGGG GGG
Sbjct: 731 GGGGGRNRRSGGGARFGGRDFRRDRGSGGGGYGGGGGG 768
>12_01_0838 - 7830944-7831444
Length = 166
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = -1
Query: 608 GGGXXXXXXXGGGXXFFFFFFXXPXGGGGGGXXXXGGG 495
GGG G G + + + GGGGGG GGG
Sbjct: 118 GGGGGGGSGQGSGSGYGYGYGKGGGGGGGGGGDGGGGG 155
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = -1
Query: 608 GGGXXXXXXXGGGXXFFFFFFXXPXGGGGGGXXXXGGG 495
GGG G G + + GGGGGG GGG
Sbjct: 116 GGGGGGGGGSGQGSGSGYGYGYGKGGGGGGGGGGDGGG 153
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +3
Query: 498 PPXXVXPPPPPPXGXXKKKKKKXXXPXXXXXXXXXPP 608
PP PPPPPP G K P PP
Sbjct: 330 PPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPP 366
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 498 PPXXVXPPPPPPXGXXK 548
PP PPPPPP G K
Sbjct: 358 PPKGPSPPPPPPPGGKK 374
>09_01_0112 +
1737438-1737777,1738441-1738511,1738974-1739052,
1741559-1741641,1741733-1741784,1742038-1742105,
1742279-1742345,1742426-1742505,1742576-1742640,
1742785-1742847,1743271-1743427,1743511-1743588,
1743677-1744219,1744321-1744497,1744534-1744788,
1745270-1745329,1745874-1745888,1746123-1746135,
1746819-1746934
Length = 793
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/53 (32%), Positives = 18/53 (33%)
Frame = -1
Query: 653 GGGXXXXXXXXXXXXGGGXXXXXXXGGGXXFFFFFFXXPXGGGGGGXXXXGGG 495
GGG GGG GGG F + P GGG GGG
Sbjct: 39 GGGGSGSPPHRFSRGGGGGGGDGGGGGGGGGRFHPYRGPSDHSGGGGYRSGGG 91
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/53 (32%), Positives = 18/53 (33%)
Frame = -1
Query: 653 GGGXXXXXXXXXXXXGGGXXXXXXXGGGXXFFFFFFXXPXGGGGGGXXXXGGG 495
GGG GGG GGG F + GGGG GGG
Sbjct: 40 GGGSGSPPHRFSRGGGGGGGDGGGGGGGGGRFHPYRGPSDHSGGGGYRSGGGG 92
>07_01_0176 - 1244704-1245102
Length = 132
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = -1
Query: 605 GGXXXXXXXGGGXXFFFFFFXXPXGGGGGGXXXXGGG 495
GG GGG FF + P GGGG G G G
Sbjct: 34 GGAEAGGGGGGGGGFFEVPWFGPPGGGGWGAWGAGYG 70
>10_08_0608 +
19184722-19185224,19185331-19185410,19186048-19186235,
19187021-19187927,19188015-19188142,19189270-19189356,
19189422-19189472,19189582-19189668,19189746-19189873,
19190469-19190608,19190721-19190882,19190964-19192733,
19192807-19192922,19193077-19193227,19193243-19193371,
19193598-19194139
Length = 1722
Score = 24.6 bits (51), Expect(2) = 3.2
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +3
Query: 498 PPXXVXPPPPPP 533
PP PPPPPP
Sbjct: 27 PPPPPHPPPPPP 38
Score = 23.0 bits (47), Expect(2) = 3.2
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 516 PPPPPPXG 539
PPPPPP G
Sbjct: 57 PPPPPPVG 64
>06_02_0257 -
13533689-13533714,13533799-13533925,13534013-13534121,
13534193-13534272,13534758-13534979,13536070-13536318,
13537032-13537484,13539834-13540556
Length = 662
Score = 29.1 bits (62), Expect = 3.9
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 462 GGGXXXXXXXXXPPXXVXPPPPPP 533
GGG PP PPPPPP
Sbjct: 46 GGGGDRRGGFQLPPDAAPPPPPPP 69
>01_06_1670 -
39007402-39008229,39008320-39008567,39009159-39009364,
39009454-39011054
Length = 960
Score = 29.1 bits (62), Expect = 3.9
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 498 PPXXVXPPPPPPXGXXKKKKKK 563
PP PPPPPP G + + +K
Sbjct: 422 PPPPPPPPPPPPVGYWESRVRK 443
>01_01_0446 +
3321832-3322232,3322398-3322455,3322810-3323748,
3324504-3324654,3324740-3324818,3325826-3325934
Length = 578
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = -1
Query: 608 GGGXXXXXXXGGGXXFFFFFFXXPXGGGGGGXXXXGGG 495
GGG GGG + GGGGGG GGG
Sbjct: 47 GGGRGRGGGGGGGGGYGGGGVGGGYGGGGGGYGGGGGG 84
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = -1
Query: 608 GGGXXXXXXXGGGXXFFFFFFXXPXGGGGGGXXXXGGG 495
GGG GGG + GGGGGG GGG
Sbjct: 82 GGGYGGGGRGGGGGGGYGGGGGGGRGGGGGGGGRGGGG 119
Score = 27.9 bits (59), Expect = 8.9
Identities = 18/53 (33%), Positives = 19/53 (35%)
Frame = -1
Query: 653 GGGXXXXXXXXXXXXGGGXXXXXXXGGGXXFFFFFFXXPXGGGGGGXXXXGGG 495
GGG GGG GGG + GGGGGG GGG
Sbjct: 57 GGGGGYGGGGVGGGYGGGGGGYGGGGGG------YGGGGRGGGGGGGYGGGGG 103
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -1
Query: 539 PXGGGGGGXXXXGGGXXXXXXXXPPPXXKKK 447
P GGGGG GGG P P K K
Sbjct: 398 PYHGGGGGGGGGGGGGGYTGSAAPEPAAKVK 428
>06_01_0601 + 4337575-4340149,4340566-4340978
Length = 995
Score = 23.8 bits (49), Expect(2) = 4.3
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +3
Query: 510 VXPPPPPPXG 539
+ PPPPPP G
Sbjct: 740 IHPPPPPPPG 749
Score = 23.4 bits (48), Expect(2) = 4.3
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +3
Query: 516 PPPPPPXGXXKKK 554
PPPPPP G K
Sbjct: 743 PPPPPPGGKPAAK 755
>07_03_0559 + 19475893-19476783
Length = 296
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = -1
Query: 653 GGGXXXXXXXXXXXXGGGXXXXXXXGGGXXFFFFFFXXPXGGGGGGXXXXGGG 495
GGG GGG GGG GGGGGG GGG
Sbjct: 123 GGGGFGGGSGGGVGGGGGQGGGFGAGGGVGGGSGTGGGLGGGGGGGFGGGGGG 175
Score = 28.3 bits (60), Expect = 6.7
Identities = 19/53 (35%), Positives = 19/53 (35%)
Frame = -1
Query: 653 GGGXXXXXXXXXXXXGGGXXXXXXXGGGXXFFFFFFXXPXGGGGGGXXXXGGG 495
GGG GGG GGG F GGGGGG GGG
Sbjct: 137 GGGGQGGGFGAGGGVGGGSGTGGGLGGGGGGGF-------GGGGGGGIGGGGG 182
>03_01_0023 + 198414-198968
Length = 184
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = -1
Query: 653 GGGXXXXXXXXXXXXGGGXXXXXXXGGGXXFFFFFFXXPXGGGGGGXXXXGGG 495
GGG GGG GGG GGGGGG GGG
Sbjct: 44 GGGGGGGGRGGGGGSGGGSGGGGGSGGGGSGGGGSGGGGSGGGGGGGSGGGGG 96
>09_06_0148 -
21214460-21214561,21214993-21215339,21215428-21215538,
21215673-21215835,21215921-21215999,21216110-21216228
Length = 306
Score = 28.3 bits (60), Expect = 6.7
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +3
Query: 498 PPXXVXPPPPPPXGXXKKKKKKXXXP 575
PP PPPPPP +++ ++ P
Sbjct: 199 PPPAAPPPPPPPARGRRRRGRRQRDP 224
>09_02_0057 -
3697255-3698116,3698191-3698351,3698442-3698636,
3698728-3699126,3699208-3699477,3700102-3700695
Length = 826
Score = 28.3 bits (60), Expect = 6.7
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +3
Query: 498 PPXXVXPPPPPPXGXXKKKKKK 563
PP PPPP P KK++KK
Sbjct: 575 PPAEPAPPPPQPLKLTKKEQKK 596
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 28.3 bits (60), Expect = 6.7
Identities = 19/53 (35%), Positives = 19/53 (35%)
Frame = -1
Query: 653 GGGXXXXXXXXXXXXGGGXXXXXXXGGGXXFFFFFFXXPXGGGGGGXXXXGGG 495
GGG GGG GGG P GGGGGG GGG
Sbjct: 162 GGGRGGALGRPPGGGGGGGGPGRAPGGGGGGGGPG-RAPGGGGGGGGLGGGGG 213
Score = 28.3 bits (60), Expect = 6.7
Identities = 17/53 (32%), Positives = 18/53 (33%)
Frame = -1
Query: 674 KKKKXXXGGGXXXXXXXXXXXXGGGXXXXXXXGGGXXFFFFFFXXPXGGGGGG 516
+ K GGG GGG GGG F GGGGGG
Sbjct: 274 RNKGGGGGGGGALENAREDGAEGGGGGGGGGGGGGHGAPELGFSGGGGGGGGG 326
>07_03_0560 + 19479597-19480667
Length = 356
Score = 28.3 bits (60), Expect = 6.7
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = -1
Query: 653 GGGXXXXXXXXXXXXGGGXXXXXXXGGGXXFFFFFFXXPXGGGGGGXXXXGGG 495
GGG GGG GGG GGGGGG GGG
Sbjct: 204 GGGGMGGGGGGGFGGGGGKGGGFGAGGGMGGGAGGGGGLGGGGGGGMGGGGGG 256
Score = 27.9 bits (59), Expect = 8.9
Identities = 18/59 (30%), Positives = 19/59 (32%)
Frame = -1
Query: 671 KKKXXXGGGXXXXXXXXXXXXGGGXXXXXXXGGGXXFFFFFFXXPXGGGGGGXXXXGGG 495
K+ GG GGG GGG F GG GGG GGG
Sbjct: 188 KEGGFGAGGGVGGGAGGGGGMGGGGGGGFGGGGGKGGGFGAGGGMGGGAGGGGGLGGGG 246
>07_03_0177 - 14770777-14772045
Length = 422
Score = 28.3 bits (60), Expect = 6.7
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = -1
Query: 653 GGGXXXXXXXXXXXXGGGXXXXXXXGGGXXFFFFFFXXPXGGGGGGXXXXGGG 495
GGG GGG G G F F G GGGG GGG
Sbjct: 364 GGGLGGGGGGGGGGFGGGGGSGIGGGFGKGGGFGFGVGGGGFGGGGGGGGGGG 416
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -1
Query: 608 GGGXXXXXXXGGGXXFFFFFFXXPXGGGGGGXXXXGG 498
GGG G G F F GGGGGG GG
Sbjct: 381 GGGSGIGGGFGKGGGFGFGVGGGGFGGGGGGGGGGGG 417
>06_03_0790 - 24636805-24637770
Length = 321
Score = 28.3 bits (60), Expect = 6.7
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = -1
Query: 653 GGGXXXXXXXXXXXXGGGXXXXXXXGGGXXFFFFFFXXPXGGGGGGXXXXGGG 495
GGG GGG GGG GGGGGG GGG
Sbjct: 82 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGRGGGGGGGGGGGGG 134
Score = 28.3 bits (60), Expect = 6.7
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = -1
Query: 653 GGGXXXXXXXXXXXXGGGXXXXXXXGGGXXFFFFFFXXPXGGGGGGXXXXGGG 495
GGG GGG GGG GGGGGG GGG
Sbjct: 83 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGRGGGGGGGGGGGGGG 135
Score = 28.3 bits (60), Expect = 6.7
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = -1
Query: 653 GGGXXXXXXXXXXXXGGGXXXXXXXGGGXXFFFFFFXXPXGGGGGGXXXXGGG 495
GGG GGG GGG GGGGGG GGG
Sbjct: 84 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGRGGGGGGGGGGGGGGG 136
Score = 28.3 bits (60), Expect = 6.7
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = -1
Query: 653 GGGXXXXXXXXXXXXGGGXXXXXXXGGGXXFFFFFFXXPXGGGGGGXXXXGGG 495
GGG GGG GGG GGGGGG GGG
Sbjct: 85 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGRGGGGGGGGGGGGGGGG 137
Score = 28.3 bits (60), Expect = 6.7
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = -1
Query: 653 GGGXXXXXXXXXXXXGGGXXXXXXXGGGXXFFFFFFXXPXGGGGGGXXXXGGG 495
GGG GGG GGG GGGGGG GGG
Sbjct: 86 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGRGGGGGGGGGGGGGGGGG 138
Score = 28.3 bits (60), Expect = 6.7
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = -1
Query: 653 GGGXXXXXXXXXXXXGGGXXXXXXXGGGXXFFFFFFXXPXGGGGGGXXXXGGG 495
GGG GGG GGG GGGGGG GGG
Sbjct: 87 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGRGGGGGGGGGGGGGGGGGG 139
Score = 28.3 bits (60), Expect = 6.7
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = -1
Query: 653 GGGXXXXXXXXXXXXGGGXXXXXXXGGGXXFFFFFFXXPXGGGGGGXXXXGGG 495
GGG GGG GGG GGGGGG GGG
Sbjct: 88 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGRGGGGGGGGGGGGGGGGGGG 140
Score = 28.3 bits (60), Expect = 6.7
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = -1
Query: 653 GGGXXXXXXXXXXXXGGGXXXXXXXGGGXXFFFFFFXXPXGGGGGGXXXXGGG 495
GGG GGG GGG GGGGGG GGG
Sbjct: 89 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGRGGGGGGGGGGGGGGGGGGGG 141
Score = 28.3 bits (60), Expect = 6.7
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = -1
Query: 653 GGGXXXXXXXXXXXXGGGXXXXXXXGGGXXFFFFFFXXPXGGGGGGXXXXGGG 495
GGG GGG GGG GGGGGG GGG
Sbjct: 90 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGRGGGGGGGGGGGGGGGGGGGGG 142
Score = 28.3 bits (60), Expect = 6.7
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = -1
Query: 653 GGGXXXXXXXXXXXXGGGXXXXXXXGGGXXFFFFFFXXPXGGGGGGXXXXGGG 495
GGG GGG GGG GGGGGG GGG
Sbjct: 91 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGRGGGGGGGGGGGGGGGGGGGGGG 143
Score = 28.3 bits (60), Expect = 6.7
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = -1
Query: 653 GGGXXXXXXXXXXXXGGGXXXXXXXGGGXXFFFFFFXXPXGGGGGGXXXXGGG 495
GGG GGG GGG GGGGGG GGG
Sbjct: 92 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGRGGGGGGGGGGGGGGGGGGGGGGG 144
Score = 28.3 bits (60), Expect = 6.7
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = -1
Query: 653 GGGXXXXXXXXXXXXGGGXXXXXXXGGGXXFFFFFFXXPXGGGGGGXXXXGGG 495
GGG GGG GGG GGGGGG GGG
Sbjct: 93 GGGGGGGGGGGGGGGGGGGGGGGGGGGGRGGGGGGGGGGGGGGGGGGGGGGGG 145
>06_03_0750 -
24140988-24141037,24141108-24141345,24142158-24142232,
24142345-24142413,24142550-24142581,24143503-24143583,
24143791-24143851,24144135-24144275,24144372-24144563
Length = 312
Score = 28.3 bits (60), Expect = 6.7
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +3
Query: 498 PPXXVXPPPPPPXGXXKKK 554
PP PPPPPP K+K
Sbjct: 40 PPSPPPPPPPPPSSSSKRK 58
>03_02_0436 + 8427018-8427707,8429005-8429544
Length = 409
Score = 28.3 bits (60), Expect = 6.7
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 462 GGGXXXXXXXXXPPXXVXPPPPPP 533
GGG PP PPPPPP
Sbjct: 101 GGGQQSPFFPLLPPLPPQPPPPPP 124
>12_02_1174 - 26696869-26698191
Length = 440
Score = 23.8 bits (49), Expect(2) = 7.7
Identities = 10/31 (32%), Positives = 11/31 (35%)
Frame = +3
Query: 516 PPPPPPXGXXKKKKKKXXXPXXXXXXXXXPP 608
PPPPPP K + P PP
Sbjct: 246 PPPPPPRAPVKMPRVLEPKPSPPPPSPLPPP 276
Score = 22.6 bits (46), Expect(2) = 7.7
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +3
Query: 498 PPXXVXPPPPPP 533
PP + PP PPP
Sbjct: 212 PPPTLPPPSPPP 223
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 27.9 bits (59), Expect = 8.9
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3
Query: 498 PPXXVXPPPPPPXG 539
PP + PPPPPP G
Sbjct: 48 PPPFLAPPPPPPPG 61
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,044,535
Number of Sequences: 37544
Number of extensions: 326289
Number of successful extensions: 7561
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 2041
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4904
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1945321620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -