Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_T7_B18
(737 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U13178-1|AAA86955.1| 404|Drosophila melanogaster RNA binding pr... 33 0.54
M15765-1|AAA70425.1| 365|Drosophila melanogaster unknown protei... 33 0.54
L37083-1|AAC41563.1| 404|Drosophila melanogaster RNA binding pr... 33 0.54
BT004875-1|AAO45231.1| 399|Drosophila melanogaster LD22761p pro... 31 2.2
AE014298-2351|AAN09389.1| 399|Drosophila melanogaster CG3606-PB... 31 2.2
AE014298-2350|AAF48578.2| 399|Drosophila melanogaster CG3606-PA... 31 2.2
U11288-1|AAA67715.1| 1091|Drosophila melanogaster diaphanous pro... 24 7.3
BT021398-1|AAX33546.1| 1091|Drosophila melanogaster LD14246p pro... 24 7.3
AE014134-3281|AAN11087.1| 1091|Drosophila melanogaster CG1768-PB... 24 7.3
AE014134-3280|AAF53922.1| 1091|Drosophila melanogaster CG1768-PA... 24 7.3
>U13178-1|AAA86955.1| 404|Drosophila melanogaster RNA binding
protein protein.
Length = 404
Score = 32.7 bits (71), Expect = 0.54
Identities = 20/57 (35%), Positives = 20/57 (35%)
Frame = -1
Query: 665 KXXXGGGXXXXXXXXXXXXGGGXXXXXXXGGGXXFFFFFFXXPXGGGGGGXXXXGGG 495
K GGG GGG GGG F GGGGGG GGG
Sbjct: 211 KGGGGGGGGGGRGGFGGRRGGGGGGGGGGGGGGRFDRGGGGGGNGGGGGGRYDRGGG 267
>M15765-1|AAA70425.1| 365|Drosophila melanogaster unknown protein
protein.
Length = 365
Score = 32.7 bits (71), Expect = 0.54
Identities = 20/57 (35%), Positives = 20/57 (35%)
Frame = -1
Query: 665 KXXXGGGXXXXXXXXXXXXGGGXXXXXXXGGGXXFFFFFFXXPXGGGGGGXXXXGGG 495
K GGG GGG GGG F GGGGGG GGG
Sbjct: 173 KGGGGGGGGGGRGGFGGRRGGGGGGGGGGGGGGRFDRGGGGGGNGGGGGGRYDRGGG 229
>L37083-1|AAC41563.1| 404|Drosophila melanogaster RNA binding
protein protein.
Length = 404
Score = 32.7 bits (71), Expect = 0.54
Identities = 20/57 (35%), Positives = 20/57 (35%)
Frame = -1
Query: 665 KXXXGGGXXXXXXXXXXXXGGGXXXXXXXGGGXXFFFFFFXXPXGGGGGGXXXXGGG 495
K GGG GGG GGG F GGGGGG GGG
Sbjct: 211 KGGGGGGGGGGRGGFGGRRGGGGGGGGGGGGGGRFDRGGGGGGNGGGGGGRYDRGGG 267
>BT004875-1|AAO45231.1| 399|Drosophila melanogaster LD22761p
protein.
Length = 399
Score = 30.7 bits (66), Expect = 2.2
Identities = 20/57 (35%), Positives = 20/57 (35%)
Frame = -1
Query: 665 KXXXGGGXXXXXXXXXXXXGGGXXXXXXXGGGXXFFFFFFXXPXGGGGGGXXXXGGG 495
K GGG GGG GGG F GGGGGG GGG
Sbjct: 212 KGGGGGGGGGGRGGFGGRRGGGGGGGGGGGGGGRF------DRGGGGGGGRYDRGGG 262
>AE014298-2351|AAN09389.1| 399|Drosophila melanogaster CG3606-PB,
isoform B protein.
Length = 399
Score = 30.7 bits (66), Expect = 2.2
Identities = 20/57 (35%), Positives = 20/57 (35%)
Frame = -1
Query: 665 KXXXGGGXXXXXXXXXXXXGGGXXXXXXXGGGXXFFFFFFXXPXGGGGGGXXXXGGG 495
K GGG GGG GGG F GGGGGG GGG
Sbjct: 212 KGGGGGGGGGGRGGFGGRRGGGGGGGGGGGGGGRF------DRGGGGGGGRYDRGGG 262
>AE014298-2350|AAF48578.2| 399|Drosophila melanogaster CG3606-PA,
isoform A protein.
Length = 399
Score = 30.7 bits (66), Expect = 2.2
Identities = 20/57 (35%), Positives = 20/57 (35%)
Frame = -1
Query: 665 KXXXGGGXXXXXXXXXXXXGGGXXXXXXXGGGXXFFFFFFXXPXGGGGGGXXXXGGG 495
K GGG GGG GGG F GGGGGG GGG
Sbjct: 212 KGGGGGGGGGGRGGFGGRRGGGGGGGGGGGGGGRF------DRGGGGGGGRYDRGGG 262
>U11288-1|AAA67715.1| 1091|Drosophila melanogaster diaphanous
protein protein.
Length = 1091
Score = 24.2 bits (50), Expect(2) = 7.3
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +3
Query: 462 GGGXXXXXXXXXPPXXVXPPPPPP 533
GGG P PPPPPP
Sbjct: 536 GGGPPPPPPPPMPGRAGGPPPPPP 559
Score = 23.0 bits (47), Expect(2) = 7.3
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 516 PPPPPPXG 539
PPPPPP G
Sbjct: 555 PPPPPPPG 562
>BT021398-1|AAX33546.1| 1091|Drosophila melanogaster LD14246p
protein.
Length = 1091
Score = 24.2 bits (50), Expect(2) = 7.3
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +3
Query: 462 GGGXXXXXXXXXPPXXVXPPPPPP 533
GGG P PPPPPP
Sbjct: 536 GGGPPPPPPPPMPGRAGGPPPPPP 559
Score = 23.0 bits (47), Expect(2) = 7.3
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 516 PPPPPPXG 539
PPPPPP G
Sbjct: 555 PPPPPPPG 562
>AE014134-3281|AAN11087.1| 1091|Drosophila melanogaster CG1768-PB,
isoform B protein.
Length = 1091
Score = 24.2 bits (50), Expect(2) = 7.3
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +3
Query: 462 GGGXXXXXXXXXPPXXVXPPPPPP 533
GGG P PPPPPP
Sbjct: 536 GGGPPPPPPPPMPGRAGGPPPPPP 559
Score = 23.0 bits (47), Expect(2) = 7.3
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 516 PPPPPPXG 539
PPPPPP G
Sbjct: 555 PPPPPPPG 562
>AE014134-3280|AAF53922.1| 1091|Drosophila melanogaster CG1768-PA,
isoform A protein.
Length = 1091
Score = 24.2 bits (50), Expect(2) = 7.3
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +3
Query: 462 GGGXXXXXXXXXPPXXVXPPPPPP 533
GGG P PPPPPP
Sbjct: 536 GGGPPPPPPPPMPGRAGGPPPPPP 559
Score = 23.0 bits (47), Expect(2) = 7.3
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 516 PPPPPPXG 539
PPPPPP G
Sbjct: 555 PPPPPPPG 562
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,109,142
Number of Sequences: 53049
Number of extensions: 489020
Number of successful extensions: 8296
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5428
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3334818762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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