Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP13_T7_B15
         (770 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_05_0175 + 22966151-22967614                                         36   0.036
10_08_0793 - 20614583-20614897,20615417-20615660,20617713-206178...    32   0.58 
01_06_0381 + 28878811-28879120,28880189-28880331,28880753-288815...    32   0.58 
01_07_0213 - 42028941-42029055,42029444-42029480,42029876-420302...    31   1.0  
06_01_1095 + 8984363-8984789,8985175-8985416,8985500-8985622,898...    30   2.4  
01_06_0140 - 26881282-26881290,26882027-26882128,26882816-268829...    30   2.4  
11_01_0044 + 340486-340854,341855-341911,343100-343974,344065-34...    29   3.1  
03_06_0180 + 32175658-32178145,32178765-32178808                       29   3.1  
11_05_0086 + 18964493-18965737,18965896-18966360                       29   4.1  
08_01_0201 + 1635964-1637010                                           29   4.1  
02_03_0287 + 17320242-17320481,17323422-17324767,17325124-17325142     29   4.1  
08_02_0707 - 20212190-20214592                                         29   5.4  
01_01_0140 + 1265785-1265902,1266424-1266845                           29   5.4  
02_05_0482 + 29382696-29383251,29383376-29383692                       28   7.2  
01_06_1809 - 40029628-40030539                                         28   7.2  
09_06_0239 - 21794691-21795986                                         28   9.5  
04_01_0535 + 6964311-6964685                                           28   9.5  
03_04_0023 + 16537257-16537272,16537515-16537929,16538404-165384...    28   9.5  
03_04_0021 + 16523250-16523762                                         28   9.5  

>05_05_0175 + 22966151-22967614
          Length = 487

 Score = 35.9 bits (79), Expect = 0.036
 Identities = 28/74 (37%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
 Frame = +3

Query: 156 P*RKC---SRSAGAPISAVRAGGVISSFGGPVGRPPLQSRRS-ARFSRTGWAATAEVSPP 323
           P R C   S +AG P SA R GG   S G P   PPL  +R+   FS   W ++  V   
Sbjct: 75  PRRSCCGSSSAAGTPRSAARCGGG-GSPGAPPSSPPLSPQRTHVPFS---WESSPGVPKD 130

Query: 324 ATCADS--QDILPP 359
           A C     +++LPP
Sbjct: 131 AACGRKVVREVLPP 144


>10_08_0793 -
           20614583-20614897,20615417-20615660,20617713-20617899,
           20618508-20618547,20618699-20618775,20618965-20619091
          Length = 329

 Score = 31.9 bits (69), Expect = 0.58
 Identities = 27/86 (31%), Positives = 35/86 (40%)
 Frame = +3

Query: 363 KLLTATNLTSHHANYNFTGSTSLTRCYSHTEEANREHLSSTHKHALHRKNLHPPAEPEHR 542
           ++ T   L  HH   N        RC+S ++ A    L   H H   ++ L  P E E R
Sbjct: 98  QIWTDMQLQDHHHECN----GPYCRCHSSSKHAKGSLLLLHHHH--QQQQLQRPNEMETR 151

Query: 543 RIARHERTGRLILQVTTNSDVSIFLP 620
           R     +TG L  Q     DVS  LP
Sbjct: 152 RAEASTQTGFLRSQGICERDVSSGLP 177


>01_06_0381 +
           28878811-28879120,28880189-28880331,28880753-28881532,
           28882568-28883968
          Length = 877

 Score = 31.9 bits (69), Expect = 0.58
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = +3

Query: 450 TEEANREHLSSTHKHALHRKNLHPPAEPEHRRIARHERTGR 572
           + E   EH SS  +H  HR + H   + EHR   RH+R  R
Sbjct: 778 SSEDEHEHRSSKSRHR-HRDDYHYHEDDEHRSSHRHQRDHR 817



 Score = 30.7 bits (66), Expect = 1.3
 Identities = 19/52 (36%), Positives = 23/52 (44%)
 Frame = +3

Query: 390 SHHANYNFTGSTSLTRCYSHTEEANREHLSSTHKHALHRKNLHPPAEPEHRR 545
           S   NY+   S   +R   H  E +R H S  HKH L R +     EP H R
Sbjct: 725 SDEENYDSEESYKHSR-KKHRSEDSRAHTSDVHKHKLKRHS--KDLEPRHHR 773


>01_07_0213 -
           42028941-42029055,42029444-42029480,42029876-42030244,
           42030332-42031201,42051574-42052891
          Length = 902

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 25/72 (34%), Positives = 34/72 (47%)
 Frame = +3

Query: 261 SRRSARFSRTGWAATAEVSPPATCADSQDILPPCKLLTATNLTSHHANYNFTGSTSLTRC 440
           +RR  R   TG A+    S PAT + +     P +LLT+   TSH +  N T   S    
Sbjct: 671 ARRRERQQLTGSAS----SSPATASAAAASKKP-RLLTSQTTTSHTSTSNATTPRSFDTT 725

Query: 441 YSHTEEANREHL 476
            SH + + RE L
Sbjct: 726 SSHQDASFRESL 737


>06_01_1095 +
           8984363-8984789,8985175-8985416,8985500-8985622,
           8985783-8985899,8986258-8986399,8986587-8986627,
           8987194-8987453,8987505-8987607,8987698-8987776,
           8987856-8988115
          Length = 597

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 19/35 (54%), Positives = 21/35 (60%)
 Frame = +2

Query: 101 TLTSLVGPATAQSPTRRRTLAQVQPERGGSNIGSP 205
           TL  L+ PA A SPTRRR L  + P    SN GSP
Sbjct: 25  TLPRLL-PAAAPSPTRRRRL--LAPLAAASNSGSP 56


>01_06_0140 -
           26881282-26881290,26882027-26882128,26882816-26882924,
           26883712-26883860,26883941-26884043,26884635-26884810,
           26885004-26885066,26885258-26885346,26885428-26885538,
           26885610-26885744,26886415-26886580,26886788-26886856,
           26886943-26887230,26888612-26888866
          Length = 607

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 17/43 (39%), Positives = 21/43 (48%)
 Frame = -2

Query: 577 IRRPVRSCLAMRRCSGSAGGCRFFR*SACLCVLDKCSRLASSV 449
           +R   R   A R C GSAG  R  R SA   V+ +  RL + V
Sbjct: 31  LRPAARLSFAPRWCGGSAGAARARRESAVTSVISRAPRLDAEV 73


>11_01_0044 +
           340486-340854,341855-341911,343100-343974,344065-344398,
           345553-345645,345913-346062
          Length = 625

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 21/71 (29%), Positives = 29/71 (40%)
 Frame = +3

Query: 222 SSFGGPVGRPPLQSRRSARFSRTGWAATAEVSPPATCADSQDILPPCKLLTATNLTSHHA 401
           S FG  +   P   RR   F+RTGW A A V  P        +     L+  T L    +
Sbjct: 419 SFFGRLLSALPDFLRRKVSFARTGWLAAALVPMPMAFFLMWKLHDVNTLVAGTALIGLSS 478

Query: 402 NYNFTGSTSLT 434
            + F  + S+T
Sbjct: 479 GFIFAAAVSVT 489


>03_06_0180 + 32175658-32178145,32178765-32178808
          Length = 843

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = +2

Query: 242 RPASVTVEAICPVLADWVGRDRGSLTSGYLCRLTRHFTTMQTS 370
           RP SVT+ ++ P L D  G ++G    GY+ R   H      S
Sbjct: 345 RPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVS 387


>11_05_0086 + 18964493-18965737,18965896-18966360
          Length = 569

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 15/35 (42%), Positives = 16/35 (45%)
 Frame = -2

Query: 238 GPPNDEITPPARTADIGAPALRLHLR*GAPPRRRL 134
           GPP D   PP  T  + A  L  H R   PP R L
Sbjct: 82  GPPPDPNQPPPFTNVVSAALLARHRRAAVPPLRAL 116


>08_01_0201 + 1635964-1637010
          Length = 348

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
 Frame = -2

Query: 337 SAQVAGGETSAVAAHPVRENRADRL--DCNGGRPTGPPNDEITPPARTADIGAPALRLHL 164
           SA + G +  A+ A      R DRL  DC   R  G P      P   AD+  P L  HL
Sbjct: 107 SAAMYGVKVEAIQALQANYVRRDRLTIDC-AVRVVGKPRVSAAAPLTAADVPPPDLAAHL 165


>02_03_0287 + 17320242-17320481,17323422-17324767,17325124-17325142
          Length = 534

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 16/44 (36%), Positives = 21/44 (47%)
 Frame = +1

Query: 340 HKTFYHHANFLPQQILPATTQTTILRVPPLLHDVTPTLRKPTAN 471
           H+ F    +FLP +I         L+VPP LH V P    P A+
Sbjct: 75  HRWFAQGFHFLPARIPMDGPSGWFLKVPPPLHTVDPPGSPPPAS 118


>08_02_0707 - 20212190-20214592
          Length = 800

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 16/56 (28%), Positives = 27/56 (48%)
 Frame = +3

Query: 390 SHHANYNFTGSTSLTRCYSHTEEANREHLSSTHKHALHRKNLHPPAEPEHRRIARH 557
           SHH +++   S   +   S TE + +E+ S  H H  H  + H  +E  H++   H
Sbjct: 549 SHHHDHHHDSSNEESHHNSLTENSCKENHSHCHGHDHHHHHHHDHSE-HHQQSGDH 603


>01_01_0140 + 1265785-1265902,1266424-1266845
          Length = 179

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 20/54 (37%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
 Frame = -2

Query: 334 AQVAGGETSA--VAAHPVRENRADRLDCNGGRPTGPPNDEITPPARTADIGAPA 179
           A+ AGGE +A   A+     NRA R     G  T    D    PA  A   APA
Sbjct: 90  ARAAGGEDAAGGEASRASSANRASRARAAAGEDTVGREDSRASPANRARAAAPA 143


>02_05_0482 + 29382696-29383251,29383376-29383692
          Length = 290

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 22/69 (31%), Positives = 26/69 (37%)
 Frame = +3

Query: 147 GGAP*RKCSRSAGAPISAVRAGGVISSFGGPVGRPPLQSRRSARFSRTGWAATAEVSPPA 326
           G  P     R    P S  R GG     GG        + R+ARFS T  A  AEV   +
Sbjct: 33  GNFPWLSRKRLGAKPPSPQRRGGQEREGGGDEAAGMGTTTRAARFSATSSAEPAEVQSSS 92

Query: 327 TCADSQDIL 353
           +     D L
Sbjct: 93  SSRKRADAL 101


>01_06_1809 - 40029628-40030539
          Length = 303

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
 Frame = +3

Query: 195 SAVRAGGVISSFGGPVGRPPLQSRRSARFSRTGWAATAEVSPPATCADSQDILPPCKLLT 374
           +A  A G     GG +   PL+ R   R + + W +    SP    ++S         L+
Sbjct: 37  AAAGASGGGGGVGGMINWKPLRDRLRLRRAASAWMS---ASPKPAASNSGGGGGGGATLS 93

Query: 375 ATNLTSHHAN-YNFT---GSTSLTRCYSHT 452
           ++N  S+H+N YN++    + + +R +S T
Sbjct: 94  SSNSGSNHSNKYNYSPGEAAAAFSRTFSRT 123


>09_06_0239 - 21794691-21795986
          Length = 431

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
 Frame = +3

Query: 279 FSRTGWAATAEVSPPATC-ADSQDILPPCKLLTATNLTSHHANYNFTGSTSLTRCYSHTE 455
           F  T      +  P  +C A + D+  P K  T  NLTS   NY ++   S T  Y  TE
Sbjct: 105 FDTTSDLLWTQCQPCLSCVAQAGDMYDPNKTETYANLTSSSYNYTYS-KQSFTSGYFATE 163


>04_01_0535 + 6964311-6964685
          Length = 124

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = +3

Query: 195 SAVRAGGVISSFGGPVGRPPLQSRRSARFSRTGWAATA 308
           +A  AG   ++ GGPV   P+  R +A      W A A
Sbjct: 12  TAAAAGSTTAAAGGPVAADPVVGRAAAAADPVVWRAAA 49


>03_04_0023 +
           16537257-16537272,16537515-16537929,16538404-16538466,
           16538604-16538607
          Length = 165

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 15/47 (31%), Positives = 21/47 (44%)
 Frame = +3

Query: 420 STSLTRCYSHTEEANREHLSSTHKHALHRKNLHPPAEPEHRRIARHE 560
           +TSL R   H +   +      H HA H +   PP    H ++ RHE
Sbjct: 5   ATSLNRSIDHKQGGQQRGTPQQHLHAGHAQE-QPPGH-GHGQVQRHE 49


>03_04_0021 + 16523250-16523762
          Length = 170

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 31/98 (31%), Positives = 40/98 (40%), Gaps = 8/98 (8%)
 Frame = -2

Query: 376 AVRSLHGGKMSCESAQVAGGETSAVAAHPVRENRA-DR--LDCNGGRPTGPPNDEITPPA 206
           AVR+ +GG+  C     A GE    A  P+    A DR    C   R + PP+ E     
Sbjct: 40  AVRARYGGRWICGLCGDAAGEELGRADPPISPGEALDRHAAVCRARRASVPPSPEENAGD 99

Query: 205 RTADIGAPALRLHLR*GA-----PPRRRLCCGRSNQRR 107
             A +    LR     GA     PPRR +    S+ RR
Sbjct: 100 LIAAVRVLLLRRLGSGGASSPPPPPRRVVRSTPSSPRR 137


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,992,607
Number of Sequences: 37544
Number of extensions: 558348
Number of successful extensions: 2017
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1927
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2017
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2075009728
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)