Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP13_T7_B13
         (772 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical p...    29   4.8  
Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical p...    29   4.8  
Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical pr...    29   4.8  
Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical pr...    29   4.8  
Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical pr...    29   4.8  
Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical pr...    29   4.8  
Z93387-2|CAB07650.1|  763|Caenorhabditis elegans Hypothetical pr...    28   8.5  

>Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical
            protein R11A8.7b protein.
          Length = 2584

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
 Frame = -3

Query: 680  VTTGIXGL----WQPSVHRDVAFDPSMSAXPIIAKQNSPSV 570
            VTTG+  L    W P+     A DP+ S  P+ A+  S SV
Sbjct: 2255 VTTGLSSLELKGWMPASFAPSARDPNRSQPPLFARSQSNSV 2295


>Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical
            protein R11A8.7a protein.
          Length = 2606

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
 Frame = -3

Query: 680  VTTGIXGL----WQPSVHRDVAFDPSMSAXPIIAKQNSPSV 570
            VTTG+  L    W P+     A DP+ S  P+ A+  S SV
Sbjct: 2277 VTTGLSSLELKGWMPASFAPSARDPNRSQPPLFARSQSNSV 2317


>Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical protein
            R11A8.7d protein.
          Length = 1427

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
 Frame = -3

Query: 680  VTTGIXGL----WQPSVHRDVAFDPSMSAXPIIAKQNSPSV 570
            VTTG+  L    W P+     A DP+ S  P+ A+  S SV
Sbjct: 1098 VTTGLSSLELKGWMPASFAPSARDPNRSQPPLFARSQSNSV 1138


>Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical protein
            R11A8.7c protein.
          Length = 1405

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
 Frame = -3

Query: 680  VTTGIXGL----WQPSVHRDVAFDPSMSAXPIIAKQNSPSV 570
            VTTG+  L    W P+     A DP+ S  P+ A+  S SV
Sbjct: 1076 VTTGLSSLELKGWMPASFAPSARDPNRSQPPLFARSQSNSV 1116


>Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical protein
            R11A8.7b protein.
          Length = 2584

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
 Frame = -3

Query: 680  VTTGIXGL----WQPSVHRDVAFDPSMSAXPIIAKQNSPSV 570
            VTTG+  L    W P+     A DP+ S  P+ A+  S SV
Sbjct: 2255 VTTGLSSLELKGWMPASFAPSARDPNRSQPPLFARSQSNSV 2295


>Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical protein
            R11A8.7a protein.
          Length = 2606

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
 Frame = -3

Query: 680  VTTGIXGL----WQPSVHRDVAFDPSMSAXPIIAKQNSPSV 570
            VTTG+  L    W P+     A DP+ S  P+ A+  S SV
Sbjct: 2277 VTTGLSSLELKGWMPASFAPSARDPNRSQPPLFARSQSNSV 2317


>Z93387-2|CAB07650.1|  763|Caenorhabditis elegans Hypothetical
           protein T02E9.3 protein.
          Length = 763

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
 Frame = -1

Query: 445 FGHLVHALGRAAGGAKLPSAGLCLNASKAEASLAESGKDMLTVEPRESGGSKQCDFTSRV 266
           FG L H  G       LP   +    S+  + ++++G    +   R+SGGSK+   +   
Sbjct: 212 FGQLTHRGGERERRHSLPRVIIEEVRSRRGSRMSQTGSQSGSPTRRQSGGSKERSPSQPD 271

Query: 265 SH--SKRETRRRSP 230
            H  +K + R RSP
Sbjct: 272 IHIVAKPQQRWRSP 285


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,410,597
Number of Sequences: 27780
Number of extensions: 343998
Number of successful extensions: 984
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 943
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 984
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)