Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP13_T7_B09
         (764 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    28   0.27 
AJ302654-1|CAC35519.1|  168|Anopheles gambiae gSG2-like protein ...    25   2.6  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 28.3 bits (60), Expect = 0.27
 Identities = 13/28 (46%), Positives = 13/28 (46%)
 Frame = +2

Query: 458 GGGGXKXXPPXXGGGGFFXXXPKKGGGG 541
           GGGG     P  GGG      P  GGGG
Sbjct: 203 GGGGSGGGAPGGGGGSSGGPGPGGGGGG 230



 Score = 26.6 bits (56), Expect = 0.84
 Identities = 12/28 (42%), Positives = 12/28 (42%)
 Frame = +1

Query: 418 PXXXGGXXXXXXFGGGGGKXXXPXXGGG 501
           P   GG       GGGGG    P  GGG
Sbjct: 200 PGAGGGGSGGGAPGGGGGSSGGPGPGGG 227


>AJ302654-1|CAC35519.1|  168|Anopheles gambiae gSG2-like protein
           protein.
          Length = 168

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 16/46 (34%), Positives = 17/46 (36%), Gaps = 2/46 (4%)
 Frame = +1

Query: 454 FGGGGGKXXXPXXGGGXVFXXXPKKGGGWXFXXXPPXXXG--GGXF 585
           FG GGG+   P  G G      P  G G      P    G  GG F
Sbjct: 119 FGQGGGQGGIPSFGSGQQNGGVPFLGNGQGQSGFPSFGNGQQGGNF 164


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 460,607
Number of Sequences: 2352
Number of extensions: 8323
Number of successful extensions: 20
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79418373
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)