Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_T7_B09
(764 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 36 0.024
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 36 0.024
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 36 0.024
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 36 0.032
U41031-3|AAA82620.1| 164|Caenorhabditis elegans Hypothetical pr... 34 0.13
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 32 0.39
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 32 0.39
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 31 0.90
Z72502-7|CAA96592.1| 140|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 30 2.1
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 29 2.7
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 29 2.7
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 29 2.7
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 2.7
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 3.6
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 4.8
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 29 4.8
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 29 4.8
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 29 4.8
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 4.8
Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 28 8.4
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 28 8.4
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 28 8.4
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 36.3 bits (80), Expect = 0.024
Identities = 15/28 (53%), Positives = 15/28 (53%)
Frame = -3
Query: 540 PPPPFFGXXXKNPPPPXXGGXXFXPPPP 457
PPPP G PPPP GG PPPP
Sbjct: 760 PPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 33.1 bits (72), Expect = 0.22
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -3
Query: 540 PPPPFFGXXXKNPPPPXXGGXXFXPPPP 457
PPPP G PPPP G PPPP
Sbjct: 761 PPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 31.1 bits (67), Expect = 0.90
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -2
Query: 499 PPXXGGXXFXPPPPQKXXXXPPXPXXGG 416
PP GG PPPP PP P GG
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGG 779
Score = 31.1 bits (67), Expect = 0.90
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -1
Query: 536 PPPFLGXXXKTXPPPXXGXXFXPPPPP 456
PPP G PPP G PPPPP
Sbjct: 762 PPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/46 (34%), Positives = 16/46 (34%), Gaps = 3/46 (6%)
Frame = -1
Query: 533 PPFLGXXXKTXPP---PXXGXXFXPPPPPKXXXXXXPPXXXGGGXK 405
PP G PP P PPPPP PP GG K
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFK 781
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = -1
Query: 533 PPFLGXXXKTXPPPXXGXXFXPPPPPKXXXXXXPPXXXGG 414
PP G PPP PPPPP PP G
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = -3
Query: 561 GGXXXKXPPPPFFGXXXKNPPPPXXGGXXFXPPPP 457
GG PPPP G PPPP G F P P
Sbjct: 766 GGCPPPPPPPPPGGFKGGPPPPPPPG--MFAPMAP 798
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/42 (40%), Positives = 17/42 (40%), Gaps = 7/42 (16%)
Frame = -3
Query: 561 GGXXXKXPP---PPFFGXXXKNPP----PPXXGGXXFXPPPP 457
GG PP PP G PP PP GG PPPP
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP 765
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Frame = -2
Query: 535 PPLFWXGXKKPXPPXXGGXXFXPPPPQK--XXXXPPXPXXGG 416
PP+ G P PP GG PPPP PP P G
Sbjct: 752 PPI--SGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -1
Query: 536 PPPFLGXXXKTXPPPXXGXXFXPPPPP 456
PPP G PPP G PPPP
Sbjct: 761 PPPPPGGCPPPPPPPPPGGFKGGPPPP 787
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 36.3 bits (80), Expect = 0.024
Identities = 15/28 (53%), Positives = 15/28 (53%)
Frame = -3
Query: 540 PPPPFFGXXXKNPPPPXXGGXXFXPPPP 457
PPPP G PPPP GG PPPP
Sbjct: 760 PPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 33.1 bits (72), Expect = 0.22
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -3
Query: 540 PPPPFFGXXXKNPPPPXXGGXXFXPPPP 457
PPPP G PPPP G PPPP
Sbjct: 761 PPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 31.1 bits (67), Expect = 0.90
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -2
Query: 499 PPXXGGXXFXPPPPQKXXXXPPXPXXGG 416
PP GG PPPP PP P GG
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGG 779
Score = 31.1 bits (67), Expect = 0.90
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -1
Query: 536 PPPFLGXXXKTXPPPXXGXXFXPPPPP 456
PPP G PPP G PPPPP
Sbjct: 762 PPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/46 (34%), Positives = 16/46 (34%), Gaps = 3/46 (6%)
Frame = -1
Query: 533 PPFLGXXXKTXPP---PXXGXXFXPPPPPKXXXXXXPPXXXGGGXK 405
PP G PP P PPPPP PP GG K
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFK 781
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = -1
Query: 533 PPFLGXXXKTXPPPXXGXXFXPPPPPKXXXXXXPPXXXGG 414
PP G PPP PPPPP PP G
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = -3
Query: 561 GGXXXKXPPPPFFGXXXKNPPPPXXGGXXFXPPPP 457
GG PPPP G PPPP G F P P
Sbjct: 766 GGCPPPPPPPPPGGFKGGPPPPPPPG--MFAPMAP 798
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/42 (40%), Positives = 17/42 (40%), Gaps = 7/42 (16%)
Frame = -3
Query: 561 GGXXXKXPP---PPFFGXXXKNPP----PPXXGGXXFXPPPP 457
GG PP PP G PP PP GG PPPP
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP 765
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Frame = -2
Query: 535 PPLFWXGXKKPXPPXXGGXXFXPPPPQK--XXXXPPXPXXGG 416
PP+ G P PP GG PPPP PP P G
Sbjct: 752 PPI--SGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -1
Query: 536 PPPFLGXXXKTXPPPXXGXXFXPPPPP 456
PPP G PPP G PPPP
Sbjct: 761 PPPPPGGCPPPPPPPPPGGFKGGPPPP 787
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 36.3 bits (80), Expect = 0.024
Identities = 15/28 (53%), Positives = 15/28 (53%)
Frame = -3
Query: 540 PPPPFFGXXXKNPPPPXXGGXXFXPPPP 457
PPPP G PPPP GG PPPP
Sbjct: 343 PPPPPPGGCPPPPPPPPPGGFKGGPPPP 370
Score = 33.1 bits (72), Expect = 0.22
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -3
Query: 540 PPPPFFGXXXKNPPPPXXGGXXFXPPPP 457
PPPP G PPPP G PPPP
Sbjct: 344 PPPPPGGCPPPPPPPPPGGFKGGPPPPP 371
Score = 31.1 bits (67), Expect = 0.90
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -2
Query: 499 PPXXGGXXFXPPPPQKXXXXPPXPXXGG 416
PP GG PPPP PP P GG
Sbjct: 335 PPISGGPPPPPPPPGGCPPPPPPPPPGG 362
Score = 31.1 bits (67), Expect = 0.90
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -1
Query: 536 PPPFLGXXXKTXPPPXXGXXFXPPPPP 456
PPP G PPP G PPPPP
Sbjct: 345 PPPPGGCPPPPPPPPPGGFKGGPPPPP 371
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/46 (34%), Positives = 16/46 (34%), Gaps = 3/46 (6%)
Frame = -1
Query: 533 PPFLGXXXKTXPP---PXXGXXFXPPPPPKXXXXXXPPXXXGGGXK 405
PP G PP P PPPPP PP GG K
Sbjct: 319 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFK 364
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = -1
Query: 533 PPFLGXXXKTXPPPXXGXXFXPPPPPKXXXXXXPPXXXGG 414
PP G PPP PPPPP PP G
Sbjct: 335 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 374
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = -3
Query: 561 GGXXXKXPPPPFFGXXXKNPPPPXXGGXXFXPPPP 457
GG PPPP G PPPP G F P P
Sbjct: 349 GGCPPPPPPPPPGGFKGGPPPPPPPG--MFAPMAP 381
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/42 (40%), Positives = 17/42 (40%), Gaps = 7/42 (16%)
Frame = -3
Query: 561 GGXXXKXPP---PPFFGXXXKNPP----PPXXGGXXFXPPPP 457
GG PP PP G PP PP GG PPPP
Sbjct: 307 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP 348
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Frame = -2
Query: 535 PPLFWXGXKKPXPPXXGGXXFXPPPPQK--XXXXPPXPXXGG 416
PP+ G P PP GG PPPP PP P G
Sbjct: 335 PPI--SGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 374
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -1
Query: 536 PPPFLGXXXKTXPPPXXGXXFXPPPPP 456
PPP G PPP G PPPP
Sbjct: 344 PPPPPGGCPPPPPPPPPGGFKGGPPPP 370
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 35.9 bits (79), Expect = 0.032
Identities = 20/49 (40%), Positives = 21/49 (42%)
Frame = -2
Query: 559 GGGXXXTTPPLFWXGXKKPXPPXXGGXXFXPPPPQKXXXXPPXPXXGGG 413
G G PP+F G P PP GG PPPP PP P G G
Sbjct: 79 GPGGIPPPPPMFAGGI-PPPPPMMGG--IPPPPPMFGAPPPPPPPSGLG 124
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = -3
Query: 540 PPPPFFGXXXKNPPPPXXGGXXFXPPPPKXXXXXXP 433
PPPP FG PPPP G P PP+ P
Sbjct: 106 PPPPMFGAP---PPPPPPSGLGVAPQPPRPKTPVNP 138
Score = 32.7 bits (71), Expect = 0.29
Identities = 15/28 (53%), Positives = 15/28 (53%)
Frame = -3
Query: 540 PPPPFFGXXXKNPPPPXXGGXXFXPPPP 457
PPPP F PPPP GG PPPP
Sbjct: 85 PPPPMFAGGIP-PPPPMMGG--IPPPPP 109
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/42 (38%), Positives = 17/42 (40%)
Frame = -1
Query: 536 PPPFLGXXXKTXPPPXXGXXFXPPPPPKXXXXXXPPXXXGGG 411
PPP + PPP G PPPPP PP G G
Sbjct: 85 PPPPMFAGGIPPPPPMMGGI--PPPPPMFGAPPPPPPPSGLG 124
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -2
Query: 505 PXPPXXGGXXFXPPPPQKXXXXPPXPXXGGG 413
P PP GG PPPP PP P GG
Sbjct: 75 PPPPGPGG--IPPPPPMFAGGIPPPPPMMGG 103
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -2
Query: 535 PPLFWXGXKKPXPPXXGGXXFXPPPPQKXXXXPPXPXXG 419
PP G P PP G PPPP PP P G
Sbjct: 75 PPPPGPGGIPPPPPMFAGG-IPPPPPMMGGIPPPPPMFG 112
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = -1
Query: 536 PPPFLGXXXKTXPPPXXGXXFXPPPPPKXXXXXXPP 429
PPP +G PPP G PPPP PP
Sbjct: 97 PPPMMGGIPP--PPPMFGAPPPPPPPSGLGVAPQPP 130
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -2
Query: 499 PPXXGGXXFXPPPPQKXXXXPPXPXXGGG 413
PP G F PPPP PP P GG
Sbjct: 67 PPVPNG--FIPPPPGPGGIPPPPPMFAGG 93
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -1
Query: 497 PPXXGXXFXPPPPPKXXXXXXPPXXXGGG 411
PP G PPPPP PP GG
Sbjct: 75 PPPPGPGGIPPPPPMFAGGIPPPPPMMGG 103
>U41031-3|AAA82620.1| 164|Caenorhabditis elegans Hypothetical
protein C16B8.3 protein.
Length = 164
Score = 33.9 bits (74), Expect = 0.13
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -3
Query: 540 PPPPFFGXXXKNPPPPXXGGXXFXPPPP 457
PPPP PPPP G + PPPP
Sbjct: 40 PPPPVGAGVGYAPPPPRPYGATYAPPPP 67
Score = 29.1 bits (62), Expect = 3.6
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -3
Query: 504 PPPPXXGGXXFXPPPPK 454
PPPP G + PPPP+
Sbjct: 40 PPPPVGAGVGYAPPPPR 56
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 32.3 bits (70), Expect = 0.39
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = -1
Query: 533 PPFLGXXXKTXPPPXXGXXFXPPPPPKXXXXXXPPXXXG 417
PP G + PPP G + PPPPP PP G
Sbjct: 278 PPTPGMTPRPPPPPSSGM-WPPPPPPPPGRTPGPPGMPG 315
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -3
Query: 540 PPPPFFGXXXKNPPPPXXGGXXFXPPPP 457
P PP G + PPPP G PPPP
Sbjct: 276 PMPPTPGMTPRPPPPPSSGMWPPPPPPP 303
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 5/55 (9%)
Frame = -2
Query: 562 GGGGXXXTTPP-LFWXGXKKPXPPXX----GGXXFXPPPPQKXXXXPPXPXXGGG 413
G GG PP + + G P PP G + PPPP + PP P G G
Sbjct: 329 GMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSR----PPAPPSGHG 379
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -2
Query: 505 PXPPXXGGXXFXPPPPQKXXXXPPXPXXGG 416
P PP G PPPP PP P G
Sbjct: 276 PMPPTPGMTPRPPPPPSSGMWPPPPPPPPG 305
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/39 (38%), Positives = 16/39 (41%), Gaps = 5/39 (12%)
Frame = -3
Query: 558 GXXXKXPPPPFFGXXXKNPPP-----PXXGGXXFXPPPP 457
G + PPPP G PPP P G PPPP
Sbjct: 282 GMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP 320
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = -1
Query: 536 PPPFLGXXXKTXPPPXXGXXFXPPPPPKXXXXXXPPXXXGG 414
PPP PP G PPPPP PP G
Sbjct: 265 PPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPG 305
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 32.3 bits (70), Expect = 0.39
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = -1
Query: 533 PPFLGXXXKTXPPPXXGXXFXPPPPPKXXXXXXPPXXXG 417
PP G + PPP G + PPPPP PP G
Sbjct: 288 PPTPGMTPRPPPPPSSGM-WPPPPPPPPGRTPGPPGMPG 325
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -3
Query: 540 PPPPFFGXXXKNPPPPXXGGXXFXPPPP 457
P PP G + PPPP G PPPP
Sbjct: 286 PMPPTPGMTPRPPPPPSSGMWPPPPPPP 313
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 5/55 (9%)
Frame = -2
Query: 562 GGGGXXXTTPP-LFWXGXKKPXPPXX----GGXXFXPPPPQKXXXXPPXPXXGGG 413
G GG PP + + G P PP G + PPPP + PP P G G
Sbjct: 339 GMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSR----PPAPPSGHG 389
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -2
Query: 505 PXPPXXGGXXFXPPPPQKXXXXPPXPXXGG 416
P PP G PPPP PP P G
Sbjct: 286 PMPPTPGMTPRPPPPPSSGMWPPPPPPPPG 315
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/39 (38%), Positives = 16/39 (41%), Gaps = 5/39 (12%)
Frame = -3
Query: 558 GXXXKXPPPPFFGXXXKNPPP-----PXXGGXXFXPPPP 457
G + PPPP G PPP P G PPPP
Sbjct: 292 GMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP 330
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = -1
Query: 536 PPPFLGXXXKTXPPPXXGXXFXPPPPPKXXXXXXPPXXXGG 414
PPP PP G PPPPP PP G
Sbjct: 275 PPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPG 315
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 31.1 bits (67), Expect = 0.90
Identities = 19/56 (33%), Positives = 20/56 (35%)
Frame = +1
Query: 406 FXPPPXXXGGXXXXXXFGGGGGKXXXPXXGGGXVFXXXPKKGGGWXFXXXPPXXXG 573
F PPP G GG GG P G G P +GG F PP G
Sbjct: 390 FAPPPSAFGAPQGP---GGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPG 442
>Z72502-7|CAA96592.1| 140|Caenorhabditis elegans Hypothetical
protein C08B6.10 protein.
Length = 140
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -1
Query: 542 HHPPPFLGXXXKTXPPPXXGXXFXPPPPP 456
HH PP++ PPP G PPPP
Sbjct: 106 HHRPPWMRGPWWRRPPPPWGPPPPGPPPP 134
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -3
Query: 540 PPPPFFGXXXKNPPPPXXGGXXFXPPPP 457
PPPP PPPP GG PPPP
Sbjct: 39 PPPP--------PPPPCGGGYEAPPPPP 58
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/40 (35%), Positives = 16/40 (40%)
Frame = -1
Query: 536 PPPFLGXXXKTXPPPXXGXXFXPPPPPKXXXXXXPPXXXG 417
PPP + + PPP PPPPP PP G
Sbjct: 73 PPPLISILQQAPPPP-------PPPPPPTLKAPPPPPILG 105
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = -1
Query: 542 HHPPPFLGXXXKTXPPPXXGXXFXPPPPPKXXXXXXPP 429
HHP + PPP G PPPPP PP
Sbjct: 283 HHPYAMMPPPFGFFPPPPRG--HFPPPPPHFMGRGMPP 318
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = -1
Query: 542 HHPPPFLGXXXKTXPPPXXGXXFXPPPPPKXXXXXXPP 429
HHP + PPP G PPPPP PP
Sbjct: 283 HHPYAMMPPPFGFFPPPPRG--HFPPPPPHFMGRGMPP 318
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/47 (36%), Positives = 18/47 (38%), Gaps = 5/47 (10%)
Frame = -3
Query: 558 GXXXKXPPPPFF--GXXXKNPPPP---XXGGXXFXPPPPKXXXXXXP 433
G PPPP F G PPPP G PPPP+ P
Sbjct: 736 GFDPNKPPPPMFQQGFNAGAPPPPFGRGAGPMSSFPPPPRGGMHHMP 782
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Frame = -3
Query: 558 GXXXKXPPPPFFGXXXKNPPPPXXG--GXXFXPPPP 457
G PPPP G PPP G G PPPP
Sbjct: 765 GPMSSFPPPPRGGMHHMPPPPSFRGGRGGHGGPPPP 800
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -3
Query: 540 PPPPFFGXXXKNPPPPXXGGXXFXPPPPK 454
PPPP PPPP G PPPP+
Sbjct: 707 PPPPGIPGYPPAPPPPGVG-----PPPPQ 730
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -3
Query: 540 PPPPFFGXXXKNPPPPXXGGXXFXPPPP 457
PPPP PPPP GG PPPP
Sbjct: 577 PPPP--------PPPPMLGGPPPPPPPP 596
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 540 PPPPFFGXXXKNPPPPXXGGXXFXPPPP 457
PPPP PPP F PPPP
Sbjct: 33 PPPPMCAPPPLPCPPPPICPPQFCPPPP 60
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = -1
Query: 500 PPPXXGXXFXPPPPPKXXXXXXPPXXXGGGXKKKKK 393
PPP G PPPPP PP G G +KK+
Sbjct: 43 PPPMCGCAPPPPPPP-------PPPMCGCGCGRKKR 71
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = -3
Query: 561 GGXXXKXPPPPFFGXXXKNPPPPXXGGXXFXPPPPK 454
GG + PP+ PPPP PPPP+
Sbjct: 704 GGYPPQQQRPPYQAQPYPGPPPPQQQRGYGYPPPPQ 739
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = -3
Query: 561 GGXXXKXPPPPFFGXXXKNPPPPXXGGXXFXPPPPK 454
GG + PP+ PPPP PPPP+
Sbjct: 704 GGYPPQQQRPPYQAQPYPGPPPPQQQRGYGYPPPPQ 739
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -3
Query: 537 PPPFFGXXXKNPPPPXXGGXXFXPPPP 457
PPP G PPPP G PPPP
Sbjct: 1592 PPPRLGMPPPGPPPPNGG-----PPPP 1613
>Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical
protein F15B9.10 protein.
Length = 373
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 5/33 (15%)
Frame = +2
Query: 458 GGGGXKXXP-----PXXGGGGFFXXXPKKGGGG 541
GGGG + P GGGG+ P++GGGG
Sbjct: 250 GGGGNQNRQQVPTNPMGGGGGYPQPPPQQGGGG 282
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = -2
Query: 517 GXKKPXPPXXGGXXFXPPPPQKXXXXPPXPXXGGGG 410
G + P PP GG PPP + PP GGGG
Sbjct: 776 GRQAPMPPR-GGPGAPPPPGMRP---PPGAPGGGGG 807
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = -2
Query: 517 GXKKPXPPXXGGXXFXPPPPQKXXXXPPXPXXGGGG 410
G + P PP GG PPP + PP GGGG
Sbjct: 776 GRQAPMPPR-GGPGAPPPPGMRP---PPGAPGGGGG 807
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = -2
Query: 517 GXKKPXPPXXGGXXFXPPPPQKXXXXPPXPXXGGGG 410
G + P PP GG PPP + PP GGGG
Sbjct: 776 GRQAPMPPR-GGPGAPPPPGMRP---PPGAPGGGGG 807
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = -2
Query: 517 GXKKPXPPXXGGXXFXPPPPQKXXXXPPXPXXGGGG 410
G + P PP GG PPP + PP GGGG
Sbjct: 776 GRQAPMPPR-GGPGAPPPPGMRP---PPGAPGGGGG 807
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,091,224
Number of Sequences: 27780
Number of extensions: 236362
Number of successful extensions: 1852
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 427
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1214
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -