Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP13_T7_B04
         (810 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    27   0.68 
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    26   1.2  
AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.           25   2.8  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    24   4.8  

>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 27.1 bits (57), Expect = 0.68
 Identities = 15/50 (30%), Positives = 25/50 (50%)
 Frame = -3

Query: 679 RSKLSLRNKVTXYKTCIRPVMTYASVVFXHAARTHLKSLQVIQSRFCRIA 530
           R +  LRN    Y   +RP++ YAS+++          ++ IQ  F R+A
Sbjct: 812 RDQSFLRN---LYYALVRPLLEYASIIWNPPTIDGCSRIESIQRLFTRVA 858


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 26.2 bits (55), Expect = 1.2
 Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 8/56 (14%)
 Frame = -2

Query: 350 PSTSPKARHYGS-------S*SINGAFRH-HKHRSPSSSNPSLATKGSTSELTHRH 207
           P++ P +  YG        S   +G F   H H SP   +P + +  + + LTH H
Sbjct: 443 PTSVPSSNGYGDYMNNCLQSGYFSGGFSSLHSHHSPHHVSPGMGSTVNGASLTHSH 498


>AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.
          Length = 165

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
 Frame = -2

Query: 401 HRSRWKLHTRPSRPNG--KPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLA-TKGS 231
           H +    H  PS  N   +P     A +  S+ S     +H +  S SSS+ S + +  S
Sbjct: 66  HATSSPYHAPPSPANSHYEPMECHSAVNSSSNSSTGYLHQHQQSSSSSSSSSSSSMSSSS 125

Query: 230 TSELTHRHSPLS 195
           +S  +   SPLS
Sbjct: 126 SSSFSSPDSPLS 137


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 15/72 (20%), Positives = 29/72 (40%)
 Frame = -2

Query: 278 HRSPSSSNPSLATKGSTSELTHRHSPLSFSPDLLXXXXXXXXXXXSEAXXXXXXXXXXXX 99
           H  PSS  P ++++ +T+ + H H  L + P +             +             
Sbjct: 524 HLLPSSLYPPVSSESTTAPIFHTHF-LGYQPQMQLPHVEPFYRKEQQQQQLQQTLAEPKE 582

Query: 98  LSPASSPTNVRM 63
            + +SSP+N R+
Sbjct: 583 QTTSSSPSNNRL 594


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 698,177
Number of Sequences: 2352
Number of extensions: 13585
Number of successful extensions: 240
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 240
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 85655418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)