BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_T7_A11
(840 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 266 2e-73
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 266 2e-73
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 23 4.6
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 266 bits (652), Expect = 2e-73
Identities = 121/148 (81%), Positives = 136/148 (91%)
Frame = -1
Query: 603 QREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGXYDTARGMLPDPKNTPI 424
+REF+GLGNC++KIFK+DG+ GLYRGFGVSVQGIIIYRA+YFG YDTARGMLPDPK TP
Sbjct: 153 EREFTGLGNCLTKIFKADGITGLYRGFGVSVQGIIIYRAAYFGFYDTARGMLPDPKKTPF 212
Query: 423 VISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILCKNTIHCWATIAKTEGTSAF 244
+ISW IAQ VTTVAGI+SYPFDTVRRRMMMQSGRAKS+IL K+T+HCWATI KTEG +AF
Sbjct: 213 LISWGIAQVVTTVAGIVSYPFDTVRRRMMMQSGRAKSEILYKSTLHCWATIYKTEGGNAF 272
Query: 243 SKGAFSNVLRGTGGAFVLVLYDEIKKVL 160
KGAFSN+LRGTGGA VLVLYDEIK +L
Sbjct: 273 FKGAFSNILRGTGGALVLVLYDEIKNLL 300
Score = 65.3 bits (152), Expect = 7e-13
Identities = 37/67 (55%), Positives = 38/67 (56%)
Frame = -3
Query: 814 FPDQGXNXPLKXK*KQVFXGGVXXKTQXGXXFXGNXASGGAPRSHLXCASCTPXDFARTR 635
FP Q N K K KQVF GGV TQ F GN ASGGA + C P DFARTR
Sbjct: 84 FPTQALNFAFKDKYKQVFLGGVDKNTQFLRYFVGNLASGGAAGATSLC-FVYPLDFARTR 142
Query: 634 XAADVGK 614
AADVGK
Sbjct: 143 LAADVGK 149
Score = 30.7 bits (66), Expect = 0.017
Identities = 29/129 (22%), Positives = 50/129 (38%), Gaps = 6/129 (4%)
Frame = -1
Query: 603 QREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGXYDTARGMLPD--PKNT 430
++ + G+ +C +I K G + +RG +V +A F D + + KNT
Sbjct: 50 EQRYKGMIDCFVRIPKEQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGVDKNT 109
Query: 429 PIVISWAIAQTVTTVAGIIS----YPFDTVRRRMMMQSGRAKSDILCKNTIHCWATIAKT 262
+ + AG S YP D R R+ G+A + +C I K
Sbjct: 110 QFLRYFVGNLASGGAAGATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKA 169
Query: 261 EGTSAFSKG 235
+G + +G
Sbjct: 170 DGITGLYRG 178
Score = 26.6 bits (56), Expect = 0.28
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = -1
Query: 411 AIAQTVTTVAGIISYPFDTVRRRMMMQ--SGRAKSDILCKNTIHCWATIAKTEGTSAFSK 238
A A + TTVA P + V+ + +Q S + + K I C+ I K +G ++ +
Sbjct: 20 AAAISKTTVA-----PIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWR 74
Query: 237 GAFSNVLR 214
G +NV+R
Sbjct: 75 GNLANVIR 82
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 266 bits (652), Expect = 2e-73
Identities = 121/148 (81%), Positives = 136/148 (91%)
Frame = -1
Query: 603 QREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGXYDTARGMLPDPKNTPI 424
+REF+GLGNC++KIFK+DG+ GLYRGFGVSVQGIIIYRA+YFG YDTARGMLPDPK TP
Sbjct: 153 EREFTGLGNCLTKIFKADGITGLYRGFGVSVQGIIIYRAAYFGFYDTARGMLPDPKKTPF 212
Query: 423 VISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILCKNTIHCWATIAKTEGTSAF 244
+ISW IAQ VTTVAGI+SYPFDTVRRRMMMQSGRAKS+IL K+T+HCWATI KTEG +AF
Sbjct: 213 LISWGIAQVVTTVAGIVSYPFDTVRRRMMMQSGRAKSEILYKSTLHCWATIYKTEGGNAF 272
Query: 243 SKGAFSNVLRGTGGAFVLVLYDEIKKVL 160
KGAFSN+LRGTGGA VLVLYDEIK +L
Sbjct: 273 FKGAFSNILRGTGGALVLVLYDEIKNLL 300
Score = 65.3 bits (152), Expect = 7e-13
Identities = 37/67 (55%), Positives = 38/67 (56%)
Frame = -3
Query: 814 FPDQGXNXPLKXK*KQVFXGGVXXKTQXGXXFXGNXASGGAPRSHLXCASCTPXDFARTR 635
FP Q N K K KQVF GGV TQ F GN ASGGA + C P DFARTR
Sbjct: 84 FPTQALNFAFKDKYKQVFLGGVDKNTQFLRYFVGNLASGGAAGATSLC-FVYPLDFARTR 142
Query: 634 XAADVGK 614
AADVGK
Sbjct: 143 LAADVGK 149
Score = 30.7 bits (66), Expect = 0.017
Identities = 29/129 (22%), Positives = 50/129 (38%), Gaps = 6/129 (4%)
Frame = -1
Query: 603 QREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGXYDTARGMLPD--PKNT 430
++ + G+ +C +I K G + +RG +V +A F D + + KNT
Sbjct: 50 EQRYKGMIDCFVRIPKEQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGVDKNT 109
Query: 429 PIVISWAIAQTVTTVAGIIS----YPFDTVRRRMMMQSGRAKSDILCKNTIHCWATIAKT 262
+ + AG S YP D R R+ G+A + +C I K
Sbjct: 110 QFLRYFVGNLASGGAAGATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKA 169
Query: 261 EGTSAFSKG 235
+G + +G
Sbjct: 170 DGITGLYRG 178
Score = 26.6 bits (56), Expect = 0.28
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = -1
Query: 411 AIAQTVTTVAGIISYPFDTVRRRMMMQ--SGRAKSDILCKNTIHCWATIAKTEGTSAFSK 238
A A + TTVA P + V+ + +Q S + + K I C+ I K +G ++ +
Sbjct: 20 AAAISKTTVA-----PIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWR 74
Query: 237 GAFSNVLR 214
G +NV+R
Sbjct: 75 GNLANVIR 82
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 22.6 bits (46), Expect = 4.6
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +2
Query: 170 LISSYKTSTKAPPVPLRTLEKAPL 241
L++++KT T+ P + LEK P+
Sbjct: 134 LVNAFKTLTQEPKNTNKFLEKGPV 157
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,241
Number of Sequences: 438
Number of extensions: 3116
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26945694
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -