Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_FL5_P24
(928 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0521 + 18500105-18500529,18501216-18501284,18501467-185015... 32 0.56
09_02_0495 + 9880714-9881196 32 0.56
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 32 0.74
02_05_0686 - 30900748-30902167,30903442-30904742 31 1.3
07_01_0069 + 505291-505327,505726-505956,506317-506652,507025-50... 31 1.7
04_03_0660 + 18463011-18463322,18463424-18463516,18464500-184646... 31 1.7
07_01_0678 - 5103836-5104613,5104697-5104888,5104994-5105036,510... 30 2.3
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 30 2.3
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 30 2.3
03_05_0843 + 28126480-28127007,28127092-28127457,28129388-281294... 30 2.3
01_01_0083 + 631196-631675 30 2.3
06_03_0429 - 20701107-20701534,20701628-20701847 30 3.0
01_01_0345 + 2752790-2753102,2753309-2754079,2755795-2756078 30 3.0
01_01_0796 + 6190931-6192745 27 3.6
11_01_0727 - 6010537-6010548,6011029-6011606,6011709-6011774,601... 29 5.2
08_02_1258 - 25670092-25670152,25671124-25671327,25671400-256716... 29 5.2
07_01_0662 + 4972953-4973645,4973758-4974046,4974790-4974803,497... 29 5.2
05_02_0081 + 6432957-6433289,6433367-6433882,6434283-6434570 29 5.2
12_02_0640 - 21447470-21448309 29 6.9
12_02_0635 - 21430245-21431156 29 6.9
08_02_1291 + 25930056-25930067,25930289-25930334,25930434-259305... 29 6.9
04_04_1104 - 30928475-30928501,30929008-30929110,30929287-309293... 29 6.9
02_04_0382 - 22501041-22501279,22501717-22501810 29 6.9
01_06_0292 + 28243408-28243543,28243631-28243760,28243860-28244550 29 6.9
09_02_0327 - 7284829-7284889,7284946-7286126 28 9.2
04_04_0347 + 24564589-24565296 28 9.2
03_06_0084 + 31536286-31536718,31536907-31536983,31537380-315374... 28 9.2
>10_08_0521 +
18500105-18500529,18501216-18501284,18501467-18501555,
18501726-18501838,18502023-18502124,18502576-18502663,
18502795-18503361,18503766-18504149,18504168-18504384,
18504466-18504548,18505174-18505256,18505796-18506032,
18506481-18506658,18506814-18507328,18507740-18507916,
18508385-18508768,18508885-18509031
Length = 1285
Score = 32.3 bits (70), Expect = 0.56
Identities = 19/51 (37%), Positives = 22/51 (43%)
Frame = -2
Query: 924 LXPGPAXAPXRAGXKAPAXGNAXXXTPPPPPGNXAXXPQXTXRQGGGGXXG 772
L P P +P A A A G +P PPP + Q QGGGG G
Sbjct: 12 LVPTPTPSPPTANAAAAAAGAVPVSSPTPPPKD-----QQQEGQGGGGGVG 57
>09_02_0495 + 9880714-9881196
Length = 160
Score = 32.3 bits (70), Expect = 0.56
Identities = 16/43 (37%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Frame = -2
Query: 876 PAXGNAXXXTPPPPPGNXAXXPQXTXRQGG-GGXXGXXXXPPP 751
P G A PPPPP + GG GG G PPP
Sbjct: 41 PIAGGAVNSYPPPPPAGSSSSSSSGGGDGGAGGLFGGTYPPPP 83
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 31.9 bits (69), Expect = 0.74
Identities = 18/64 (28%), Positives = 20/64 (31%)
Frame = -2
Query: 918 PGPAXAPXRAGXKAPAXGNAXXXTPPPPPGNXAXXPQXTXRQGGGGXXGXXXXPPPAXEX 739
P P P R+ + P PPPPP P G G PPP
Sbjct: 665 PPPPPPPPRSSSRTPTGAATSSKGPPPPP--PPPLPPANRTNGPGVPSAPPPPPPPPPAN 722
Query: 738 RXXG 727
R G
Sbjct: 723 RSNG 726
Score = 28.3 bits (60), Expect = 9.2
Identities = 12/36 (33%), Positives = 14/36 (38%)
Frame = -2
Query: 918 PGPAXAPXRAGXKAPAXGNAXXXTPPPPPGNXAXXP 811
P P P P +A PPPPP N + P
Sbjct: 692 PPPPPLPPANRTNGPGVPSAPPPPPPPPPANRSNGP 727
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 31.1 bits (67), Expect = 1.3
Identities = 14/43 (32%), Positives = 15/43 (34%)
Frame = -2
Query: 915 GPAXAPXRAGXKAPAXGNAXXXTPPPPPGNXAXXPQXTXRQGG 787
GP P G P PPPPPG P +GG
Sbjct: 343 GPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGG 385
Score = 29.5 bits (63), Expect = 4.0
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = -2
Query: 918 PGPAXAPXRAGXKAPAXGNAXXXTPPPPPGNXAXXPQXTXRQGGGGXXGXXXXPPP 751
P P AP K P PPPPP P GG G PPP
Sbjct: 330 PPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPP---PGGKKGGPPPPPP 382
>07_01_0069 +
505291-505327,505726-505956,506317-506652,507025-507372,
507735-508594,508902-508971,509157-509371,509477-509537,
509606-509715,510644-510694,510794-510916
Length = 813
Score = 30.7 bits (66), Expect = 1.7
Identities = 20/75 (26%), Positives = 31/75 (41%)
Frame = -2
Query: 249 LTTILESGGDSRSYVARSESIMRDSDVAFSHSAALAIAQVRRNGNKNNISRRHFMATDLL 70
+ T + +S + E ++RD+DVA S S V R K+ S+R AT
Sbjct: 122 VVTDTDLANESGNGCTHGEGVLRDADVASSRSGNDLTPDVDRTLGKSKASKRQCDATTST 181
Query: 69 KLSPSEXKXXRTGAP 25
+P + AP
Sbjct: 182 AAAPEAEEMDEREAP 196
>04_03_0660 +
18463011-18463322,18463424-18463516,18464500-18464607,
18464892-18465044,18465256-18465354,18465443-18465571,
18465987-18466166,18466208-18466246,18466247-18466363,
18466445-18466609
Length = 464
Score = 30.7 bits (66), Expect = 1.7
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = -2
Query: 900 PXRAGXKAPAXGNAXXXTPPPPPGNXAXXPQXTXRQGGGG 781
P A +AP+ PPPPP A P R GGGG
Sbjct: 39 PPPARHRAPSP--PRPPPPPPPPTQPAPPPPPPARSGGGG 76
>07_01_0678 -
5103836-5104613,5104697-5104888,5104994-5105036,
5105712-5105835,5105924-5106016,5106754-5106931,
5107032-5107138,5108098-5108179,5108277-5108314,
5108409-5108495,5109025-5109135,5109282-5109773
Length = 774
Score = 30.3 bits (65), Expect = 2.3
Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Frame = -2
Query: 918 PGPAXAPXRAGXKA--PAXGNAXXXTPPPPPGNXAXXPQXTXRQGGG 784
P PA AP A KA P N+ PPPPP P+ GGG
Sbjct: 76 PAPAPAPEPAPRKARLPRACNSKPKPPPPPP---PERPRRRAAAGGG 119
>05_01_0028 +
182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 30.3 bits (65), Expect = 2.3
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = -2
Query: 918 PGPAXAPXRAGXKAPAXGNAXXXTPPPPPGNXAXXP 811
P PA P R + P TPPPPP + + P
Sbjct: 75 PPPAPRPPRRHHRIPPPPPPLLPTPPPPPASISPTP 110
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 30.3 bits (65), Expect = 2.3
Identities = 19/57 (33%), Positives = 22/57 (38%)
Frame = -2
Query: 918 PGPAXAPXRAGXKAPAXGNAXXXTPPPPPGNXAXXPQXTXRQGGGGXXGXXXXPPPA 748
P P+ A +G P A PP PG P +GGGG PPPA
Sbjct: 338 PSPSAAGAGSGPPPPPPPAAPAAPRPPGPGPGPPPPPGAAGRGGGG------PPPPA 388
>03_05_0843 +
28126480-28127007,28127092-28127457,28129388-28129487,
28130266-28130546,28130643-28130705,28131276-28131431,
28131913-28132080,28132158-28132298,28132714-28132840,
28132888-28132994,28134142-28134372,28134446-28134559,
28135091-28135261
Length = 850
Score = 30.3 bits (65), Expect = 2.3
Identities = 17/53 (32%), Positives = 19/53 (35%)
Frame = -2
Query: 912 PAXAPXRAGXKAPAXGNAXXXTPPPPPGNXAXXPQXTXRQGGGGXXGXXXXPP 754
PA + AG A PPPP N A + R GG G PP
Sbjct: 24 PAASSAVAGAPAVMPPPPPPLPPPPPRSNSAPPERRALRWAAGGGSGGGNSPP 76
>01_01_0083 + 631196-631675
Length = 159
Score = 30.3 bits (65), Expect = 2.3
Identities = 14/50 (28%), Positives = 17/50 (34%)
Frame = -2
Query: 900 PXRAGXKAPAXGNAXXXTPPPPPGNXAXXPQXTXRQGGGGXXGXXXXPPP 751
P + P ++ PPP G P GGGG G P P
Sbjct: 60 PSSSSSNTPPSSSSYWNYPPPQGGGGGYIPYYQPPAGGGGGGGGFNYPAP 109
>06_03_0429 - 20701107-20701534,20701628-20701847
Length = 215
Score = 29.9 bits (64), Expect = 3.0
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = -2
Query: 918 PGPAXAPXRAGX-KAPAXGNAXXXTPPPPPGNXAXXPQXTXRQ 793
P PA AP + K PA A PPPPP + + P ++
Sbjct: 139 PSPAPAPAASPIAKPPAAVTAATPPPPPPPPSPSPSPSPAPQE 181
>01_01_0345 + 2752790-2753102,2753309-2754079,2755795-2756078
Length = 455
Score = 29.9 bits (64), Expect = 3.0
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +1
Query: 727 PSPSXLPRGWGXGGXXXSXPAXLSXXXLWGGXXVSWWXGG 846
PSPS RGWG GG A +W S GG
Sbjct: 6 PSPSLEKRGWGTGGTRAKRTAATVSGAIWAKCGGSGSAGG 45
>01_01_0796 + 6190931-6192745
Length = 604
Score = 27.1 bits (57), Expect(2) = 3.6
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -2
Query: 894 RAGXKAPAXGNAXXXTPPPPP 832
R G K P G++ PPPPP
Sbjct: 180 RRGGKRPIQGSSVPPPPPPPP 200
Score = 21.0 bits (42), Expect(2) = 3.6
Identities = 11/35 (31%), Positives = 11/35 (31%)
Frame = -2
Query: 846 PPPPPGNXAXXPQXTXRQGGGGXXGXXXXPPPAXE 742
P PP A P GG PPP E
Sbjct: 226 PVAPPPFVADQPPPPPPPAAGGSLWIPELPPPPVE 260
>11_01_0727 -
6010537-6010548,6011029-6011606,6011709-6011774,
6011867-6011964,6013238-6013608
Length = 374
Score = 29.1 bits (62), Expect = 5.2
Identities = 17/49 (34%), Positives = 19/49 (38%)
Frame = -2
Query: 918 PGPAXAPXRAGXKAPAXGNAXXXTPPPPPGNXAXXPQXTXRQGGGGXXG 772
PG AP G + PA GN PP PG+ P GG G
Sbjct: 295 PGGPSAPGTYG-QPPAPGNYAQPHPPTYPGSNQGAPGVNPGYGGNNRQG 342
>08_02_1258 -
25670092-25670152,25671124-25671327,25671400-25671611,
25671701-25671749,25671833-25672612,25672696-25672767,
25672907-25672954,25673053-25673127,25673238-25673312,
25673614-25673668,25673931-25674016,25674759-25674988
Length = 648
Score = 29.1 bits (62), Expect = 5.2
Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 4/53 (7%)
Frame = -2
Query: 927 SLXPGPAXAPXRAGXKAPAXGNAXXXTPPPPPGNXAXXPQXTXR----QGGGG 781
S P PA A K G + PPPPPG P + R +GGGG
Sbjct: 8 SASPPPASASTGGDRKR---GRSSPSLPPPPPGPPPQVPHGSKRHRRDEGGGG 57
>07_01_0662 +
4972953-4973645,4973758-4974046,4974790-4974803,
4974848-4974856
Length = 334
Score = 29.1 bits (62), Expect = 5.2
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = -2
Query: 918 PGPAXAPXRAGXKAPAXGNAXXXTPPPPPGNXAXXPQ 808
P PA AP PA + PPPPP PQ
Sbjct: 179 PTPALAPASPPRHRPASPPSYLARPPPPPPGYIEPPQ 215
>05_02_0081 + 6432957-6433289,6433367-6433882,6434283-6434570
Length = 378
Score = 29.1 bits (62), Expect = 5.2
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = -2
Query: 846 PPPPPGNXAXXPQXTXRQGGGGXXGXXXXPPPA 748
PPPPP + + P +GGGG P A
Sbjct: 173 PPPPPASKSDHPAPLYGEGGGGFSWDAADSPAA 205
>12_02_0640 - 21447470-21448309
Length = 279
Score = 28.7 bits (61), Expect = 6.9
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -2
Query: 912 PAXAPXRAGXKAPAXGNAXXXTPPPPPGN 826
PA P ++P+ TPPPPPG+
Sbjct: 208 PARTPPPERRESPSPPRGRPRTPPPPPGS 236
>12_02_0635 - 21430245-21431156
Length = 303
Score = 28.7 bits (61), Expect = 6.9
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -2
Query: 912 PAXAPXRAGXKAPAXGNAXXXTPPPPPGN 826
PA P ++P+ TPPPPPG+
Sbjct: 205 PARTPPPERRESPSPPRGRPRTPPPPPGS 233
>08_02_1291 +
25930056-25930067,25930289-25930334,25930434-25930546,
25930645-25930930,25931357-25931421,25931642-25931693,
25931774-25931883,25932611-25932641,25932853-25933004,
25934622-25934840
Length = 361
Score = 28.7 bits (61), Expect = 6.9
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -1
Query: 298 GGIGLTNVSMSQMQGQVDYDFGVGGRLPI 212
GG L ++Q G Y +G GGRLP+
Sbjct: 101 GGPALPRYGIAQFPGGSGYPYGYGGRLPM 129
>04_04_1104 -
30928475-30928501,30929008-30929110,30929287-30929340,
30929803-30929895,30930063-30930140,30930416-30930527,
30930618-30930756,30930823-30930910,30930984-30931079,
30931675-30931781,30931874-30932009,30932089-30932186,
30932954-30933047,30933132-30933301,30933749-30933819,
30936066-30936194,30936552-30936654,30936764-30936907,
30937123-30937245,30937482-30937563,30939044-30939120,
30939261-30939315,30939365-30939443,30939544-30939620,
30939739-30939869,30939947-30940120,30940245-30940310,
30940937-30941572
Length = 1113
Score = 28.7 bits (61), Expect = 6.9
Identities = 16/50 (32%), Positives = 20/50 (40%)
Frame = -2
Query: 900 PXRAGXKAPAXGNAXXXTPPPPPGNXAXXPQXTXRQGGGGXXGXXXXPPP 751
P + K P ++ P PP A P + R GGGG PPP
Sbjct: 46 PPQLMPKPPPSSSSSAAATPAPPAPAAPPPPTSRRGGGGG----AALPPP 91
>02_04_0382 - 22501041-22501279,22501717-22501810
Length = 110
Score = 28.7 bits (61), Expect = 6.9
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = -2
Query: 840 PPPGNXAXXPQXTXRQGGGGXXGXXXXPPP 751
PPP P + GGGG G PPP
Sbjct: 74 PPPSPDYYDPPPSPYYGGGGGYGKPPPPPP 103
>01_06_0292 + 28243408-28243543,28243631-28243760,28243860-28244550
Length = 318
Score = 28.7 bits (61), Expect = 6.9
Identities = 14/47 (29%), Positives = 18/47 (38%)
Frame = -2
Query: 843 PPPPGNXAXXPQXTXRQGGGGXXGXXXXPPPAXEXRXXGVXPXXTAA 703
PPPP R GGG PPPA + + + P +A
Sbjct: 126 PPPPQQQHYHHHHHHRVAGGGARVTLVSPPPAPQSQCASMQPSPASA 172
>09_02_0327 - 7284829-7284889,7284946-7286126
Length = 413
Score = 28.3 bits (60), Expect = 9.2
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -2
Query: 912 PAXAPXRAGXKAPAXGNAXXXTPPPPPGNXA 820
PA AP A A A + PPPPP A
Sbjct: 123 PAMAPLNAAAIAAAAASGDSRNPPPPPRRPA 153
>04_04_0347 + 24564589-24565296
Length = 235
Score = 28.3 bits (60), Expect = 9.2
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -2
Query: 924 LXPGPAXAPXRAGXKAPAXGNAXXXTPPPPP 832
L P PA + AP G+ +PPPPP
Sbjct: 153 LAPAPAPSSHVQYSPAPTPGDGRHQSPPPPP 183
>03_06_0084 +
31536286-31536718,31536907-31536983,31537380-31537428,
31537778-31538048,31540876-31541104,31541511-31541750
Length = 432
Score = 28.3 bits (60), Expect = 9.2
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +3
Query: 351 GTQGNGAAALGWCPLXACGXLXWXCSTRLPPPAGTTLSAPGFL 479
G G G L P AC + CS+ PP A T+ +A FL
Sbjct: 211 GGGGGGGVVLPMMP--ACDDMVGICSSPAPPAAATSSAAAYFL 251
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,662,326
Number of Sequences: 37544
Number of extensions: 459503
Number of successful extensions: 2029
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1552
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1923
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2647531240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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