Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_FL5_P24
(928 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical pr... 44 2e-04
AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical ... 44 2e-04
AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical ... 44 2e-04
Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical pr... 43 4e-04
AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical ... 43 4e-04
AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical ... 43 4e-04
AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical ... 39 0.004
L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte upt... 38 0.013
AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein. 38 0.013
Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical pr... 36 0.041
X86403-1|CAA60157.1| 575|Caenorhabditis elegans nicotinic acety... 36 0.054
U23525-1|AAK71377.1| 575|Caenorhabditis elegans Acetylcholine r... 36 0.054
X83887-1|CAA58764.1| 498|Caenorhabditis elegans alpha-1 subunit... 35 0.095
AY523511-1|AAR98633.1| 498|Caenorhabditis elegans acetylcholine... 35 0.095
AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical... 35 0.095
AF022973-7|AAN84815.1| 480|Caenorhabditis elegans Acetylcholine... 35 0.095
AF022973-6|AAC25796.1| 498|Caenorhabditis elegans Acetylcholine... 35 0.095
U28735-8|AAF99957.2| 434|Caenorhabditis elegans Acetylcholine r... 34 0.13
AY519852-1|AAR89633.1| 434|Caenorhabditis elegans acetylcholine... 34 0.13
U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protei... 33 0.22
AC084197-42|AAU87806.2| 544|Caenorhabditis elegans Acetylcholin... 33 0.38
AC006679-2|AAK84465.2| 425|Caenorhabditis elegans Ligand-gated ... 33 0.38
Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical pr... 32 0.67
Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical pr... 32 0.67
Z50029-2|CAA90341.3| 537|Caenorhabditis elegans Hypothetical pr... 31 0.88
Z98877-14|CAD56615.1| 338|Caenorhabditis elegans Hypothetical p... 31 1.2
U88177-6|AAB42293.1| 446|Caenorhabditis elegans Acetylcholine r... 31 1.2
U88177-5|AAT48618.1| 515|Caenorhabditis elegans Acetylcholine r... 31 1.2
AY523512-1|AAR98634.1| 499|Caenorhabditis elegans acetylcholine... 31 1.2
AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen prot... 31 1.2
Z81071-1|CAB03014.2| 510|Caenorhabditis elegans Hypothetical pr... 31 1.5
U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical pr... 31 1.5
AY523513-1|AAR98635.1| 510|Caenorhabditis elegans acetylcholine... 31 1.5
AL110490-4|CAB54450.1| 474|Caenorhabditis elegans Hypothetical ... 31 1.5
AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine... 31 1.5
Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical pr... 30 2.0
L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen... 30 2.0
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 30 2.0
AC006808-1|AAF60813.1| 486|Caenorhabditis elegans Hypothetical ... 30 2.0
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 27 2.3
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 27 2.3
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 27 2.4
Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical pr... 30 2.7
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 30 2.7
Z80220-5|CAB02308.1| 493|Caenorhabditis elegans Hypothetical pr... 29 3.6
X83888-1|CAA58765.1| 493|Caenorhabditis elegans beta-1 subunit ... 29 3.6
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 29 3.6
U81144-1|AAB39358.1| 493|Caenorhabditis elegans non-alpha nicot... 29 3.6
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 29 3.6
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 29 3.6
Z99281-1|CAB16504.2| 439|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical pr... 29 4.7
X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2 prot... 29 4.7
U41553-3|AAA83293.1| 289|Caenorhabditis elegans Collagen protei... 29 4.7
M25481-1|AAA27987.1| 283|Caenorhabditis elegans collagen protein. 29 4.7
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 6.2
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 6.2
AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein. 29 6.2
AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor o... 29 6.2
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z70266-4|CAA94206.3| 534|Caenorhabditis elegans Hypothetical pr... 28 8.2
AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated... 28 8.2
>Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 43.6 bits (98), Expect = 2e-04
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Frame = +2
Query: 185 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESDSTVXILAXPPMNWIDXLLIWNAG 361
+ + LL+ ++ +PPD + V L L H I E T+ +L +W+D L W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 362 EWG--CSTWLVSSXRXWXPXVVXLNAAA 439
+G TW + + W P ++ N A
Sbjct: 130 LFGGITKTW-IPLDKIWVPDIIVFNMLA 156
>AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 43.6 bits (98), Expect = 2e-04
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Frame = +2
Query: 185 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESDSTVXILAXPPMNWIDXLLIWNAG 361
+ + LL+ ++ +PPD + V L L H I E T+ +L +W+D L W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 362 EWG--CSTWLVSSXRXWXPXVVXLNAAA 439
+G TW + + W P ++ N A
Sbjct: 130 LFGGITKTW-IPLDKIWVPDIIVFNMLA 156
>AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 43.6 bits (98), Expect = 2e-04
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Frame = +2
Query: 185 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESDSTVXILAXPPMNWIDXLLIWNAG 361
+ + LL+ ++ +PPD + V L L H I E T+ +L +W+D L W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 362 EWG--CSTWLVSSXRXWXPXVVXLNAAA 439
+G TW + + W P ++ N A
Sbjct: 130 LFGGITKTW-IPLDKIWVPDIIVFNMLA 156
>Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 42.7 bits (96), Expect = 4e-04
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Frame = +2
Query: 185 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESDSTVXILAXPPMNWIDXLLIWNAG 361
+ + LL+ ++ +PPD + V L L H I E T+ +L +W+D L W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 362 EWG--CSTWLVSSXRXWXPXVVXLN 430
+G TW + + W P ++ N
Sbjct: 130 LFGGITKTW-IPLDKIWVPDIIVFN 153
>AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 42.7 bits (96), Expect = 4e-04
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Frame = +2
Query: 185 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESDSTVXILAXPPMNWIDXLLIWNAG 361
+ + LL+ ++ +PPD + V L L H I E T+ +L +W+D L W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 362 EWG--CSTWLVSSXRXWXPXVVXLN 430
+G TW + + W P ++ N
Sbjct: 130 LFGGITKTW-IPLDKIWVPDIIVFN 153
>AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 42.7 bits (96), Expect = 4e-04
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Frame = +2
Query: 185 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESDSTVXILAXPPMNWIDXLLIWNAG 361
+ + LL+ ++ +PPD + V L L H I E T+ +L +W+D L W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 362 EWG--CSTWLVSSXRXWXPXVVXLN 430
+G TW + + W P ++ N
Sbjct: 130 LFGGITKTW-IPLDKIWVPDIIVFN 153
>AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical
protein F15E6.2 protein.
Length = 445
Score = 39.1 bits (87), Expect = 0.004
Identities = 19/98 (19%), Positives = 40/98 (40%)
Frame = +2
Query: 146 SAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRESDSTVXILAXPPM 325
S C+ + + TY + +K+V ++ + + I E V + +
Sbjct: 54 SCHSCQGGDRAWKLRTHIQTTYQNATDNKTKVVRVESVRINNVEIDERRQNVKVFGRFVL 113
Query: 326 NWIDXLLIWNAGEWGCSTWLVSSXRXWXPXVVXLNAAA 439
+W D ++ W+ +WG S + W P +V +N +
Sbjct: 114 SWNDTMVSWDKEQWGLSWLNFYWIQIWTPNIVQINGGS 151
>L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte uptake
defective protein4 protein.
Length = 433
Score = 37.5 bits (83), Expect = 0.013
Identities = 16/73 (21%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +2
Query: 242 VVNLTLHLRHANIRESDSTVXILAXPPMNWIDXLLIWNAGEWGCSTWL-VSSXRXWXPXV 418
+V++ H+ H +I + + T+ + M W D L+W+ ++ + V + W P +
Sbjct: 74 IVDVHWHIIHVSINQREQTMTVHGHIYMRWFDEFLVWDPKDFNNIQYARVKKWQVWQPKI 133
Query: 419 VXLNAAAPTGGDY 457
N+A+ G +
Sbjct: 134 KVSNSASGLGSAF 146
>AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein.
Length = 433
Score = 37.5 bits (83), Expect = 0.013
Identities = 16/73 (21%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +2
Query: 242 VVNLTLHLRHANIRESDSTVXILAXPPMNWIDXLLIWNAGEWGCSTWL-VSSXRXWXPXV 418
+V++ H+ H +I + + T+ + M W D L+W+ ++ + V + W P +
Sbjct: 74 IVDVHWHIIHVSINQREQTMTVHGHIYMRWFDEFLVWDPKDFNNIQYARVKKWQVWQPKI 133
Query: 419 VXLNAAAPTGGDY 457
N+A+ G +
Sbjct: 134 KVSNSASGLGSAF 146
>Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical
protein C35C5.5 protein.
Length = 531
Score = 35.9 bits (79), Expect = 0.041
Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 6/93 (6%)
Frame = +2
Query: 176 LSLMIDSLLATYDRESPP----DSKIVVNLTLHL-RHANIRESDSTVXILAXPPMNWIDX 340
+S ++++LL Y++ P + V +L R ++ E + + M W D
Sbjct: 29 VSQLLENLLTDYNKAVRPVHNASDALKVKFGANLCRLIDVDEVNQVLTTSLWLEMQWYDK 88
Query: 341 LLIWNAGEWGCSTWL-VSSXRXWXPXVVXLNAA 436
L WN +WG ++ + S + W P +V N A
Sbjct: 89 KLTWNPTDWGGVEYIHIPSDQIWIPDIVLYNNA 121
>X86403-1|CAA60157.1| 575|Caenorhabditis elegans nicotinic
acetylcholine receptor protein.
Length = 575
Score = 35.5 bits (78), Expect = 0.054
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +2
Query: 275 NIRESDSTVXILAXPPMNWIDXLLIWNAGEWG-CSTWLVSSXRXWXPXVVXLNAA 436
N+ E + + M W D L WN E+G S V S R W P +V N A
Sbjct: 99 NVDEKNQILQTNVWLTMKWNDFQLAWNPAEYGNISNLHVPSDRVWLPDIVLFNNA 153
>U23525-1|AAK71377.1| 575|Caenorhabditis elegans Acetylcholine
receptor protein 2 protein.
Length = 575
Score = 35.5 bits (78), Expect = 0.054
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +2
Query: 275 NIRESDSTVXILAXPPMNWIDXLLIWNAGEWG-CSTWLVSSXRXWXPXVVXLNAA 436
N+ E + + M W D L WN E+G S V S R W P +V N A
Sbjct: 99 NVDEKNQILQTNVWLTMKWNDFQLAWNPAEYGNISNLHVPSDRVWLPDIVLFNNA 153
>X83887-1|CAA58764.1| 498|Caenorhabditis elegans alpha-1 subunit of
nicotinic acetylcholinereceptor protein.
Length = 498
Score = 34.7 bits (76), Expect = 0.095
Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 6/107 (5%)
Frame = +2
Query: 131 TCAIASAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHA-----NIRESDS 295
+CAI +A + L D L+ Y+ P + +T+HL+ A ++ E +
Sbjct: 9 SCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEKNQ 67
Query: 296 TVXILAXPPMNWIDXLLIWNAGEWGCSTWL-VSSXRXWXPXVVXLNA 433
V + A W D L+W+ E+G T + + + W P V+ N+
Sbjct: 68 VVYVNAWLDYTWNDYNLVWDKAEYGNITDVRFPAGKIWKPDVLLYNS 114
>AY523511-1|AAR98633.1| 498|Caenorhabditis elegans acetylcholine
receptor (57.1 kD)alternative variant 1 protein.
Length = 498
Score = 34.7 bits (76), Expect = 0.095
Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 6/107 (5%)
Frame = +2
Query: 131 TCAIASAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHA-----NIRESDS 295
+CAI +A + L D L+ Y+ P + +T+HL+ A ++ E +
Sbjct: 9 SCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEKNQ 67
Query: 296 TVXILAXPPMNWIDXLLIWNAGEWGCSTWL-VSSXRXWXPXVVXLNA 433
V + A W D L+W+ E+G T + + + W P V+ N+
Sbjct: 68 VVYVNAWLDYTWNDYNLVWDKAEYGNITDVRFPAGKIWKPDVLLYNS 114
>AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical
protein Y105C5B.16 protein.
Length = 400
Score = 34.7 bits (76), Expect = 0.095
Identities = 17/71 (23%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = +2
Query: 209 YDRESPPDSKIVVNLTLHLRHANIRESDSTVXILAXPPMNWIDXLLIWNAGEWGCSTWL- 385
YD E+P + L +L+ ++E + ++ W D L WNA W +T +
Sbjct: 64 YDNEAPKRYNYTIFL-YYLKLVEVQEPQEKISVVMEIMEYWYDARLSWNASAWQNTTMIY 122
Query: 386 VSSXRXWXPXV 418
+ + W P +
Sbjct: 123 MKQDKVWSPTI 133
>AF022973-7|AAN84815.1| 480|Caenorhabditis elegans Acetylcholine
receptor protein16, isoform b protein.
Length = 480
Score = 34.7 bits (76), Expect = 0.095
Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 6/107 (5%)
Frame = +2
Query: 131 TCAIASAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHA-----NIRESDS 295
+CAI +A + L D L+ Y+ P + +T+HL+ A ++ E +
Sbjct: 9 SCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEKNQ 67
Query: 296 TVXILAXPPMNWIDXLLIWNAGEWGCSTWL-VSSXRXWXPXVVXLNA 433
V + A W D L+W+ E+G T + + + W P V+ N+
Sbjct: 68 VVYVNAWLDYTWNDYNLVWDKAEYGNITDVRFPAGKIWKPDVLLYNS 114
>AF022973-6|AAC25796.1| 498|Caenorhabditis elegans Acetylcholine
receptor protein16, isoform a protein.
Length = 498
Score = 34.7 bits (76), Expect = 0.095
Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 6/107 (5%)
Frame = +2
Query: 131 TCAIASAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHA-----NIRESDS 295
+CAI +A + L D L+ Y+ P + +T+HL+ A ++ E +
Sbjct: 9 SCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEKNQ 67
Query: 296 TVXILAXPPMNWIDXLLIWNAGEWGCSTWL-VSSXRXWXPXVVXLNA 433
V + A W D L+W+ E+G T + + + W P V+ N+
Sbjct: 68 VVYVNAWLDYTWNDYNLVWDKAEYGNITDVRFPAGKIWKPDVLLYNS 114
>U28735-8|AAF99957.2| 434|Caenorhabditis elegans Acetylcholine
receptor protein 22 protein.
Length = 434
Score = 34.3 bits (75), Expect = 0.13
Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
Frame = +2
Query: 242 VVNLTLHLRHAN---IRESDSTVXILAXPPMNWIDXLLIWNAGEW-GCSTWLVSSXRXWX 409
V+N+T+ + N + E + + IL P +W D L W+ EW G ++ + W
Sbjct: 60 VLNVTVQPQIYNLVEVNEQNEQIKILLWFPQSWKDDYLTWDPKEWNGIERIIIPKSQIWI 119
Query: 410 PXVVXLNAAAPT 445
P N T
Sbjct: 120 PDGYIFNTVEET 131
>AY519852-1|AAR89633.1| 434|Caenorhabditis elegans acetylcholine
receptor (51.1 kD)(acr-22) protein.
Length = 434
Score = 34.3 bits (75), Expect = 0.13
Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
Frame = +2
Query: 242 VVNLTLHLRHAN---IRESDSTVXILAXPPMNWIDXLLIWNAGEW-GCSTWLVSSXRXWX 409
V+N+T+ + N + E + + IL P +W D L W+ EW G ++ + W
Sbjct: 60 VLNVTVQPQIYNLVEVNEQNEQIKILLWFPQSWKDDYLTWDPKEWNGIERIIIPKSQIWI 119
Query: 410 PXVVXLNAAAPT 445
P N T
Sbjct: 120 PDGYIFNTVEET 131
>U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protein
140, isoform a protein.
Length = 289
Score = 33.5 bits (73), Expect = 0.22
Identities = 20/57 (35%), Positives = 21/57 (36%)
Frame = -2
Query: 918 PGPAXAPXRAGXKAPAXGNAXXXTPPPPPGNXAXXPQXTXRQGGGGXXGXXXXPPPA 748
PGP P G P+ N PP PPG P G GG G P PA
Sbjct: 150 PGPRGPPGEVGPAGPSGDNGRKG-PPGPPGG----PGGPGEGGDGGRPGNPGRPGPA 201
>AC084197-42|AAU87806.2| 544|Caenorhabditis elegans Acetylcholine
receptor protein 25 protein.
Length = 544
Score = 32.7 bits (71), Expect = 0.38
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +2
Query: 239 IVVNLTLHLRH-ANIRESDSTVXILAXPPMNWIDXLLIWNAGEWGCSTWL-VSSXRXWXP 412
++V + L L+ ++ E + V + A +W+D L W ++G T L + W P
Sbjct: 51 VMVKMGLVLQQIVDVDEKNQVVDVNAWLKFSWVDYSLKWKPEDYGGVTDLRFRKGQLWTP 110
Query: 413 XVVXLNAAAP 442
V+ N+A P
Sbjct: 111 DVLMYNSADP 120
>AC006679-2|AAK84465.2| 425|Caenorhabditis elegans Ligand-gated ion
channel protein 12 protein.
Length = 425
Score = 32.7 bits (71), Expect = 0.38
Identities = 14/57 (24%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Frame = +2
Query: 278 IRESDSTVXILAXPPMNWIDXLLIWNAGEW-GCSTWLVSSXRXWXPXVVXLNAAAPT 445
+ E + + +L P +W D L+W+ EW G + W P N T
Sbjct: 68 VNEQNEQIKLLIWFPQSWKDDYLVWDPDEWDGIEKITIPKSMVWLPDGYIFNTVEET 124
>Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical
protein R03E1.3 protein.
Length = 502
Score = 31.9 bits (69), Expect = 0.67
Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +2
Query: 245 VNLTLHLRHAN-IRESDSTVXILAXPPMNWIDXLLIWNAGEWGCSTWLVSSXRXWXPXVV 421
VN+ L + H + E + T + WID + W+A + + +S+ W P +
Sbjct: 54 VNVFLSIAHVEKVDEHEQTALVHGHIWATWIDEYMQWDAKKENVTKLTISAHSLWQPALA 113
Query: 422 XLNAA 436
N+A
Sbjct: 114 LYNSA 118
>Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.6 protein.
Length = 316
Score = 31.9 bits (69), Expect = 0.67
Identities = 20/56 (35%), Positives = 21/56 (37%), Gaps = 7/56 (12%)
Frame = -2
Query: 918 PGPAXAPXRAGXK-------APAXGNAXXXTPPPPPGNXAXXPQXTXRQGGGGXXG 772
PGPA AP + G K APA G PP P A P G G G
Sbjct: 141 PGPAGAPGQPGPKGPNGNPGAPAQGGGQGPPGPPGPAGSAGSPGQAGAPGNPGSPG 196
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/58 (31%), Positives = 20/58 (34%), Gaps = 4/58 (6%)
Frame = -2
Query: 918 PGPAXAPXRAGXKA----PAXGNAXXXTPPPPPGNXAXXPQXTXRQGGGGXXGXXXXP 757
PGP+ AP G P GNA PP P P + G G G P
Sbjct: 206 PGPSGAPGSQGPPGAPGQPGSGNAPGPAGPPGPAGPNGQPGHPGQDGQPGAPGNDGTP 263
>Z50029-2|CAA90341.3| 537|Caenorhabditis elegans Hypothetical
protein ZC504.2 protein.
Length = 537
Score = 31.5 bits (68), Expect = 0.88
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = +2
Query: 323 MNWIDXLLIWNAGEWGCSTWL-VSSXRXWXPXVVXLNAA 436
M W D L+W+ G WG L V + W P ++ N A
Sbjct: 79 MQWFDYRLMWDPGRWGKIRKLHVPVDQIWIPDILLYNNA 117
>Z98877-14|CAD56615.1| 338|Caenorhabditis elegans Hypothetical
protein Y69H2.14 protein.
Length = 338
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/54 (33%), Positives = 19/54 (35%)
Frame = -2
Query: 918 PGPAXAPXRAGXKAPAXGNAXXXTPPPPPGNXAXXPQXTXRQGGGGXXGXXXXP 757
PG A AP G G+ P PPG P GGGG G P
Sbjct: 245 PGDAGAPGAPGQVVAGPGSVGPPGPQGPPG--LAGPDGQPGHGGGGQPGPQGPP 296
>U88177-6|AAB42293.1| 446|Caenorhabditis elegans Acetylcholine
receptor protein17, isoform a protein.
Length = 446
Score = 31.1 bits (67), Expect = 1.2
Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 7/91 (7%)
Frame = +2
Query: 185 MIDSLLATYDRESPP---DSKIVVNLTLHLRHANIR---ESDSTVXILAXPPMNWIDXLL 346
+I L Y +E P +S N+T+ L I+ E+D + + W D L
Sbjct: 27 LIKYLFRDYHKELRPVKDESSGPTNVTVQLYFKQIQKVHENDQIITLYCWIEEYWQDEFL 86
Query: 347 IWNAGEWG-CSTWLVSSXRXWXPXVVXLNAA 436
WN ++G + V S W P ++ N A
Sbjct: 87 TWNPSDFGNIKSLHVPSEMIWKPDLLVYNNA 117
>U88177-5|AAT48618.1| 515|Caenorhabditis elegans Acetylcholine
receptor protein17, isoform b protein.
Length = 515
Score = 31.1 bits (67), Expect = 1.2
Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 7/91 (7%)
Frame = +2
Query: 185 MIDSLLATYDRESPP---DSKIVVNLTLHLRHANIR---ESDSTVXILAXPPMNWIDXLL 346
+I L Y +E P +S N+T+ L I+ E+D + + W D L
Sbjct: 27 LIKYLFRDYHKELRPVKDESSGPTNVTVQLYFKQIQKVHENDQIITLYCWIEEYWQDEFL 86
Query: 347 IWNAGEWG-CSTWLVSSXRXWXPXVVXLNAA 436
WN ++G + V S W P ++ N A
Sbjct: 87 TWNPSDFGNIKSLHVPSEMIWKPDLLVYNNA 117
>AY523512-1|AAR98634.1| 499|Caenorhabditis elegans acetylcholine
receptor, nicotinic,alpha 9 like (58.1 kD) alternative
variant a protein.
Length = 499
Score = 31.1 bits (67), Expect = 1.2
Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 7/91 (7%)
Frame = +2
Query: 185 MIDSLLATYDRESPP---DSKIVVNLTLHLRHANIR---ESDSTVXILAXPPMNWIDXLL 346
+I L Y +E P +S N+T+ L I+ E+D + + W D L
Sbjct: 11 LIKYLFRDYHKELRPVKDESSGPTNVTVQLYFKQIQKVHENDQIITLYCWIEEYWQDEFL 70
Query: 347 IWNAGEWG-CSTWLVSSXRXWXPXVVXLNAA 436
WN ++G + V S W P ++ N A
Sbjct: 71 TWNPSDFGNIKSLHVPSEMIWKPDLLVYNNA 101
>AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen protein
40 protein.
Length = 416
Score = 31.1 bits (67), Expect = 1.2
Identities = 20/57 (35%), Positives = 21/57 (36%), Gaps = 2/57 (3%)
Frame = -2
Query: 918 PGPAXAPXRAGX--KAPAXGNAXXXTPPPPPGNXAXXPQXTXRQGGGGXXGXXXXPP 754
PGPA P AG P+ G PP PPG A P G G G P
Sbjct: 186 PGPAGPPGPAGADGNTPSGGGEGPAGPPGPPG-PAGNPGTDGAPGNPGAPGQVTETP 241
>Z81071-1|CAB03014.2| 510|Caenorhabditis elegans Hypothetical
protein F28F8.1 protein.
Length = 510
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +2
Query: 278 IRESDSTVXILAXPPMNWIDXLLIWNAGEWG-CSTWLVSSXRXWXPXVVXLNAA 436
+ E D V I + WID L W+ ++G S V + + W P V+ N A
Sbjct: 69 VDERDQIVNIYCWLELYWIDETLTWDPKKFGNLSRIHVPAHKIWKPDVLVYNNA 122
>U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical
protein F18G5.4 protein.
Length = 615
Score = 30.7 bits (66), Expect = 1.5
Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = +2
Query: 323 MNWIDXLLIWNAGEWG-CSTWLVSSXRXWXPXVVXLNAA 436
+NW+D L WN W + R W P ++ +N A
Sbjct: 167 INWMDPRLSWNESLWSEIKAIYIPHARIWKPDIILVNNA 205
>AY523513-1|AAR98635.1| 510|Caenorhabditis elegans acetylcholine
receptor, one ofnine alpha a7-like nicotinic
acetylcholine receptor subunits(58.6 kD) (acr-18)
protein.
Length = 510
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +2
Query: 278 IRESDSTVXILAXPPMNWIDXLLIWNAGEWG-CSTWLVSSXRXWXPXVVXLNAA 436
+ E D V I + WID L W+ ++G S V + + W P V+ N A
Sbjct: 69 VDERDQIVNIYCWLELYWIDETLTWDPKKFGNLSRIHVPAHKIWKPDVLVYNNA 122
>AL110490-4|CAB54450.1| 474|Caenorhabditis elegans Hypothetical
protein Y48B6A.4 protein.
Length = 474
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 6/90 (6%)
Frame = +2
Query: 185 MIDSLLATYDRESPP--DSKIVVNLTLHL---RHANIRESDSTVXILAXPPMNWIDXLLI 349
++ L YD P D + VN+ L L + ++ E + + ++ W D L
Sbjct: 28 LLKDLREGYDPVERPVADHRKPVNVKLRLILQQLVDVDERNQVITLVVWNQYTWNDYKLR 87
Query: 350 WNAGEWGCSTWL-VSSXRXWXPXVVXLNAA 436
W+ E+G T L + W P ++ N+A
Sbjct: 88 WSPEEYGNITTLQIPHGTLWKPDILLFNSA 117
>AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine
receptor protein 6 protein.
Length = 562
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +2
Query: 275 NIRESDSTVXILAXPPMNWIDXLLIWNAGEWGCSTWL-VSSXRXWXPXVVXLNAA 436
++ E D + + +W+D L WN E+G T + W P ++ N A
Sbjct: 44 DVHEKDQVITLKGTLIHHWLDYRLSWNPDEFGNITLMHFPGEMLWLPDIILYNNA 98
>Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.5 protein.
Length = 316
Score = 30.3 bits (65), Expect = 2.0
Identities = 19/56 (33%), Positives = 20/56 (35%), Gaps = 7/56 (12%)
Frame = -2
Query: 918 PGPAXAPXRAGXK-------APAXGNAXXXTPPPPPGNXAXXPQXTXRQGGGGXXG 772
PGPA P + G K APA G PP P A P G G G
Sbjct: 141 PGPAGVPGQPGPKGPNGNPGAPAQGGGQGPPGPPGPAGSAGSPGQAGAPGNPGSPG 196
Score = 29.5 bits (63), Expect = 3.6
Identities = 18/58 (31%), Positives = 20/58 (34%), Gaps = 4/58 (6%)
Frame = -2
Query: 918 PGPAXAPXRAGXKA----PAXGNAXXXTPPPPPGNXAXXPQXTXRQGGGGXXGXXXXP 757
PGP+ AP G P GNA PP P P + G G G P
Sbjct: 206 PGPSGAPGPQGPPGAPGQPGSGNAPGPAGPPGPAGPNGQPGHPGQDGQPGAPGNDGTP 263
>L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen
protein.
Length = 308
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/55 (32%), Positives = 20/55 (36%)
Frame = -2
Query: 918 PGPAXAPXRAGXKAPAXGNAXXXTPPPPPGNXAXXPQXTXRQGGGGXXGXXXXPP 754
PGP AP G P+ G PP PPG + P G G G P
Sbjct: 179 PGPEGAPGEDG-NTPSRGGVGEAGPPGPPGT-SGNPGTDGAPGNPGAPGQVTETP 231
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 30.3 bits (65), Expect = 2.0
Identities = 19/56 (33%), Positives = 20/56 (35%)
Frame = -2
Query: 918 PGPAXAPXRAGXKAPAXGNAXXXTPPPPPGNXAXXPQXTXRQGGGGXXGXXXXPPP 751
P A AP + AP PPPPG QGG G G PPP
Sbjct: 386 PPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFG---PPPP 438
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = -2
Query: 918 PGPAXAPXRAGXKAPAXGNAXXXTPPPPPGNXAXXPQXT 802
P P P G P G PPPP G A P T
Sbjct: 411 PPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPT 449
Score = 28.7 bits (61), Expect = 6.2
Identities = 19/57 (33%), Positives = 21/57 (36%), Gaps = 4/57 (7%)
Frame = -2
Query: 909 AXAPXRAGXKAPAXGNAXXX-TPPP---PPGNXAXXPQXTXRQGGGGXXGXXXXPPP 751
A +P G P +A PPP PPG A P G G G PPP
Sbjct: 358 APSPQSFGGPPPPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPP 414
>AC006808-1|AAF60813.1| 486|Caenorhabditis elegans Hypothetical
protein Y58G8A.1 protein.
Length = 486
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/65 (24%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Frame = +2
Query: 245 VNLTLHLRHAN-IRESDSTVXILAXPPMNWIDXLLIWNAGEWGCSTWLVSSXRXWXPXVV 421
V + L++ H + E + T + +W D L W ST ++S + W P +
Sbjct: 54 VAVYLNIAHVEKVDEHEQTALVHGHLMASWTDEYLKWERKATNISTLSIASSKLWQPALQ 113
Query: 422 XLNAA 436
N+A
Sbjct: 114 LYNSA 118
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 27.1 bits (57), Expect(2) = 2.3
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = -2
Query: 846 PPPPPGNXAXXPQXTXRQGGGGXXGXXXXPPP 751
PPPPP P GG G PPP
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
Score = 21.4 bits (43), Expect(2) = 2.3
Identities = 13/35 (37%), Positives = 13/35 (37%), Gaps = 5/35 (14%)
Frame = -2
Query: 918 PGPAXAPXRAGXKAPAX-GNAXXXT----PPPPPG 829
P P P G P G T PPPPPG
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPG 749
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 27.1 bits (57), Expect(2) = 2.3
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = -2
Query: 846 PPPPPGNXAXXPQXTXRQGGGGXXGXXXXPPP 751
PPPPP P GG G PPP
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
Score = 21.4 bits (43), Expect(2) = 2.3
Identities = 13/35 (37%), Positives = 13/35 (37%), Gaps = 5/35 (14%)
Frame = -2
Query: 918 PGPAXAPXRAGXKAPAX-GNAXXXT----PPPPPG 829
P P P G P G T PPPPPG
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPG 749
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 27.1 bits (57), Expect(2) = 2.4
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = -2
Query: 846 PPPPPGNXAXXPQXTXRQGGGGXXGXXXXPPP 751
PPPPP P GG G PPP
Sbjct: 341 PPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 372
Score = 21.4 bits (43), Expect(2) = 2.4
Identities = 13/35 (37%), Positives = 13/35 (37%), Gaps = 5/35 (14%)
Frame = -2
Query: 918 PGPAXAPXRAGXKAPAX-GNAXXXT----PPPPPG 829
P P P G P G T PPPPPG
Sbjct: 298 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPG 332
>Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical
protein C09G5.5 protein.
Length = 317
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/56 (33%), Positives = 20/56 (35%), Gaps = 7/56 (12%)
Frame = -2
Query: 918 PGPAXAPXRAGXK-------APAXGNAXXXTPPPPPGNXAXXPQXTXRQGGGGXXG 772
PGPA AP G + APA G PP P A P G G G
Sbjct: 139 PGPAGAPGNPGPQGPNGNPGAPAHGGGQGPPGPPGPAGDAGSPGQAGAPGNPGRPG 194
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/43 (37%), Positives = 18/43 (41%)
Frame = -2
Query: 846 PPPPPGNXAXXPQXTXRQGGGGXXGXXXXPPPAXEXRXXGVXP 718
PPPP G P +GG G G PPP + R G P
Sbjct: 771 PPPPRGGMHHMPPPPSFRGGRG--GHGGPPPPHFDRRGGGGPP 811
>Z80220-5|CAB02308.1| 493|Caenorhabditis elegans Hypothetical
protein T08G11.5 protein.
Length = 493
Score = 29.5 bits (63), Expect = 3.6
Identities = 18/68 (26%), Positives = 28/68 (41%), Gaps = 2/68 (2%)
Frame = +2
Query: 239 IVVNLTLHL-RHANIRESDSTVXILAXPPMNWIDXLLIWNAGEWG-CSTWLVSSXRXWXP 412
++V + L L N+ E D + + W D + WN +G VS + W P
Sbjct: 56 LIVKMALQLVLLINVDEKDQVMHTNVWLTLQWHDFQMKWNPVNYGEIKQIRVSPDKVWLP 115
Query: 413 XVVXLNAA 436
+V N A
Sbjct: 116 DIVLFNNA 123
>X83888-1|CAA58765.1| 493|Caenorhabditis elegans beta-1 subunit of
nicotinic acetylcholinereceptor protein.
Length = 493
Score = 29.5 bits (63), Expect = 3.6
Identities = 18/68 (26%), Positives = 28/68 (41%), Gaps = 2/68 (2%)
Frame = +2
Query: 239 IVVNLTLHL-RHANIRESDSTVXILAXPPMNWIDXLLIWNAGEWG-CSTWLVSSXRXWXP 412
++V + L L N+ E D + + W D + WN +G VS + W P
Sbjct: 56 LIVKMALQLVLLINVDEKDQVMHTNVWLTLQWHDFQMKWNPVNYGEIKQIRVSPDKVWLP 115
Query: 413 XVVXLNAA 436
+V N A
Sbjct: 116 DIVLFNNA 123
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 29.5 bits (63), Expect = 3.6
Identities = 22/75 (29%), Positives = 24/75 (32%), Gaps = 2/75 (2%)
Frame = -2
Query: 924 LXPGPAXAPXRAGXKAPAX--GNAXXXTPPPPPGNXAXXPQXTXRQGGGGXXGXXXXPPP 751
L PG P +G P G PP PPG P G G G P P
Sbjct: 210 LTPGAPGEPGDSGPPGPPGPPGAPGNDGPPGPPG-PKGAPGPDGPPGADGQSGPPGPPGP 268
Query: 750 AXEXRXXGVXPXXTA 706
A G+ P A
Sbjct: 269 AGTPGEKGICPKYCA 283
>U81144-1|AAB39358.1| 493|Caenorhabditis elegans non-alpha
nicotinic acetylcholinereceptor subunit precursor
protein.
Length = 493
Score = 29.5 bits (63), Expect = 3.6
Identities = 18/68 (26%), Positives = 28/68 (41%), Gaps = 2/68 (2%)
Frame = +2
Query: 239 IVVNLTLHL-RHANIRESDSTVXILAXPPMNWIDXLLIWNAGEWG-CSTWLVSSXRXWXP 412
++V + L L N+ E D + + W D + WN +G VS + W P
Sbjct: 56 LIVKMALQLVLLINVDEKDQVMHTNVWLTLQWHDFQMKWNPVNYGEIKQIRVSPDKVWLP 115
Query: 413 XVVXLNAA 436
+V N A
Sbjct: 116 DIVLFNNA 123
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 29.5 bits (63), Expect = 3.6
Identities = 22/75 (29%), Positives = 24/75 (32%), Gaps = 2/75 (2%)
Frame = -2
Query: 924 LXPGPAXAPXRAGXKAPAX--GNAXXXTPPPPPGNXAXXPQXTXRQGGGGXXGXXXXPPP 751
L PG P +G P G PP PPG P G G G P P
Sbjct: 210 LTPGAPGEPGDSGPPGPPGPPGAPGNDGPPGPPG-PKGAPGPDGPPGADGQSGPPGPPGP 268
Query: 750 AXEXRXXGVXPXXTA 706
A G+ P A
Sbjct: 269 AGTPGEKGICPKYCA 283
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/55 (30%), Positives = 18/55 (32%), Gaps = 1/55 (1%)
Frame = -2
Query: 912 PAXAPXRAGXKAPAXGNAXXXTPPPPPGNXAXXPQXTXR-QGGGGXXGXXXXPPP 751
P P GNA PPPP G + P T Q G PPP
Sbjct: 230 PTPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSGEGNASRRPPP 284
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/40 (37%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Frame = -2
Query: 867 GNAXXXTPPPPPGNXAXXPQXTXR-QGGGGXXGXXXXPPP 751
GNA PPPP G + P T Q G PPP
Sbjct: 121 GNASRRPPPPPKGTGSPPPPPTGEPQDLSGEGNASRRPPP 160
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/40 (37%), Positives = 15/40 (37%), Gaps = 1/40 (2%)
Frame = -2
Query: 867 GNAXXXTPPPPPGNXAXXPQXTXR-QGGGGXXGXXXXPPP 751
GNA PPPP G P T Q G PPP
Sbjct: 90 GNASRRPPPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPP 129
>Z99281-1|CAB16504.2| 439|Caenorhabditis elegans Hypothetical
protein Y57G11C.2 protein.
Length = 439
Score = 29.1 bits (62), Expect = 4.7
Identities = 19/92 (20%), Positives = 39/92 (42%), Gaps = 6/92 (6%)
Frame = +2
Query: 155 ECENATSLSLMIDSLLATYDRESPPDSK----IVVNLTLHLRHA-NIRESDSTVXILAXP 319
E + T + D L+ YD P + +++N++++ + ++ T+ +
Sbjct: 21 EVDGITVAEQLKDVLMEGYDSSIRPVNNERDILIINISMNTMSVLTLDPAEETINFSSEF 80
Query: 320 PMNWIDXLLIWNAGEWGCSTWL-VSSXRXWXP 412
+ W D L WN ++ TWL + W P
Sbjct: 81 ILQWKDEFLFWNKSDYNI-TWLKLKESFLWTP 111
>Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical
protein F53F1.5 protein.
Length = 215
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +2
Query: 743 SXAGGGXXXXPXXPPPPCRXVXCGXXAXFP 832
S GGG P PPPPC CG A P
Sbjct: 21 SGGGGGCGCAPPPPPPPC---GCGAPALPP 47
>X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2
protein.
Length = 231
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +2
Query: 743 SXAGGGXXXXPXXPPPPCRXVXCGXXAXFP 832
S GGG P PPPPC CG A P
Sbjct: 21 SGGGGGCGCAPPPPPPPC---GCGAPALPP 47
>U41553-3|AAA83293.1| 289|Caenorhabditis elegans Collagen protein
19 protein.
Length = 289
Score = 29.1 bits (62), Expect = 4.7
Identities = 20/57 (35%), Positives = 20/57 (35%)
Frame = -2
Query: 918 PGPAXAPXRAGXKAPAXGNAXXXTPPPPPGNXAXXPQXTXRQGGGGXXGXXXXPPPA 748
PGP G PA GN PP P G P QG G G P PA
Sbjct: 149 PGPKGPSGLPGSAGPAGGNGRRG-PPGPVGG----PGEQGPQGDAGRPGAAGRPGPA 200
>M25481-1|AAA27987.1| 283|Caenorhabditis elegans collagen protein.
Length = 283
Score = 29.1 bits (62), Expect = 4.7
Identities = 20/57 (35%), Positives = 20/57 (35%)
Frame = -2
Query: 918 PGPAXAPXRAGXKAPAXGNAXXXTPPPPPGNXAXXPQXTXRQGGGGXXGXXXXPPPA 748
PGP G PA GN PP P G P QG G G P PA
Sbjct: 143 PGPKGPSGLPGSAGPAGGNGRRG-PPGPVGG----PGEQGPQGDAGRPGAAGRPGPA 194
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 28.7 bits (61), Expect = 6.2
Identities = 19/71 (26%), Positives = 24/71 (33%), Gaps = 7/71 (9%)
Frame = -2
Query: 927 SLXPGPAXAPXRAGXKAPAXGNAXXXTPPPPP-------GNXAXXPQXTXRQGGGGXXGX 769
++ P P P ++ AP A PPPPP P G GG
Sbjct: 607 AVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGGPASV 666
Query: 768 XXXPPPAXEXR 736
PPA + R
Sbjct: 667 LAKLPPAQDGR 677
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 28.7 bits (61), Expect = 6.2
Identities = 19/71 (26%), Positives = 24/71 (33%), Gaps = 7/71 (9%)
Frame = -2
Query: 927 SLXPGPAXAPXRAGXKAPAXGNAXXXTPPPPP-------GNXAXXPQXTXRQGGGGXXGX 769
++ P P P ++ AP A PPPPP P G GG
Sbjct: 433 AVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGGPASV 492
Query: 768 XXXPPPAXEXR 736
PPA + R
Sbjct: 493 LAKLPPAQDGR 503
>AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein.
Length = 1475
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/59 (27%), Positives = 19/59 (32%)
Frame = -2
Query: 924 LXPGPAXAPXRAGXKAPAXGNAXXXTPPPPPGNXAXXPQXTXRQGGGGXXGXXXXPPPA 748
+ PGP G P+ PPPP Q + GGG PPA
Sbjct: 1297 IYPGPPAPGNLPGSSRPSGNRKQPLPPPPPMIRGPPPDQMYRDRSGGGGGSMRGGFPPA 1355
>AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor of
pal-1 protein 3,isoform a protein.
Length = 1475
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/59 (27%), Positives = 19/59 (32%)
Frame = -2
Query: 924 LXPGPAXAPXRAGXKAPAXGNAXXXTPPPPPGNXAXXPQXTXRQGGGGXXGXXXXPPPA 748
+ PGP G P+ PPPP Q + GGG PPA
Sbjct: 1297 IYPGPPAPGNLPGSSRPSGNRKQPLPPPPPMIRGPPPDQMYRDRSGGGGGSMRGGFPPA 1355
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +2
Query: 752 GGGXXXXPXXPPPPCRXVXCGXXAXFPGGGGG 847
G G P PPP C CG GGGGG
Sbjct: 47 GCGGGCAPPPPPPACGG-GCGGGGGGCGGGGG 77
>Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical
protein C33G3.3 protein.
Length = 409
Score = 28.3 bits (60), Expect = 8.2
Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 3/87 (3%)
Frame = +2
Query: 161 ENATSLS-LMIDSLLATYDRESPPDSKIVVNLT-LHLRHANIRESDSTVXILAXPPMNWI 334
E+A L+ L I +A+ + +N L+H + E + I ++W
Sbjct: 33 ESAKKLAKLNIPHAIASIPPNYLSQQPVTINFAQFTLQHFELNEHLKDISIHGYLELSWH 92
Query: 335 DXLLIWNAGEWGCSTWLVSS-XRXWXP 412
D L+WN W + +V S W P
Sbjct: 93 DDRLMWNQDTWKKNKLVVHSFHHIWVP 119
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 28.3 bits (60), Expect = 8.2
Identities = 22/75 (29%), Positives = 24/75 (32%), Gaps = 2/75 (2%)
Frame = -2
Query: 924 LXPGPAXAPXRAGXKAPAX--GNAXXXTPPPPPGNXAXXPQXTXRQGGGGXXGXXXXPPP 751
L PG P +G P G PP PPG P G G G P P
Sbjct: 215 LTPGAPGEPGDSGPPGPPGPPGAPGNDGPPGPPG-PKGAPGPDGPPGVDGQSGPPGPPGP 273
Query: 750 AXEXRXXGVXPXXTA 706
A G+ P A
Sbjct: 274 AGTPGEKGICPKYCA 288
>Z70266-4|CAA94206.3| 534|Caenorhabditis elegans Hypothetical
protein C40C9.2 protein.
Length = 534
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/70 (22%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = +2
Query: 239 IVVNLTLHLRHA-NIRESDSTVXILAXPPMNWIDXLLIWNAGEWGCSTWL---VSSXRXW 406
+VV++ ++L+ ++ E + + ++A W D L W+ E+G + ++ W
Sbjct: 53 LVVSVKIYLQQILDVDEKNQVITLVAWIEYQWTDYKLKWDPSEYGGIKDIRIPGNANAIW 112
Query: 407 XPXVVXLNAA 436
P V+ N+A
Sbjct: 113 KPDVLLYNSA 122
>AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated
ion channel protein 1 protein.
Length = 371
Score = 28.3 bits (60), Expect = 8.2
Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = +2
Query: 224 PPDSKIVVNLTLHLRHANIRESDSTVXILAXPPMNWIDXLLIWNAGEW-GCSTWLVSSXR 400
PP +++ + + + L+ ++ E + V L W D L WN E+ G S V
Sbjct: 51 PPITELKLTMAM-LKLVDVVEVEEKVTFLFDYLAEWTDQRLKWNPLEYGGISHIYVPQRM 109
Query: 401 XWXPXVVXLNA 433
W P V +A
Sbjct: 110 IWLPEVTIADA 120
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,123,535
Number of Sequences: 27780
Number of extensions: 282669
Number of successful extensions: 1203
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 859
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1142
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2381234086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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