Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP13_FL5_P16
         (909 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL117204-43|CAB55131.2|  917|Caenorhabditis elegans Hypothetical...    31   1.1  
U00065-1|AAK68287.1|  400|Caenorhabditis elegans Hypothetical pr...    30   2.6  
Z98877-16|CAH60800.1|  975|Caenorhabditis elegans Hypothetical p...    29   4.6  
Z98877-15|CAB63407.3|  572|Caenorhabditis elegans Hypothetical p...    29   4.6  
Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical pr...    28   8.0  
Z27078-2|CAA81588.3|  788|Caenorhabditis elegans Hypothetical pr...    28   8.0  

>AL117204-43|CAB55131.2|  917|Caenorhabditis elegans Hypothetical
           protein Y116A8C.26a protein.
          Length = 917

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 17/58 (29%), Positives = 30/58 (51%)
 Frame = +2

Query: 539 ELKYLRCITNAIMPYLLKNDDIQNSVFRVLVREIFAGWVLLSLTDVLADPYILNTLII 712
           E  YL  + + I+  ++  +D +    R L+RE+    V+L   D L+DP  +  LI+
Sbjct: 223 ENAYLHDLVDIILYLIMPPEDFRCRPLRFLLREVVVRKVILPTLDYLSDPNEIFQLIV 280


>U00065-1|AAK68287.1|  400|Caenorhabditis elegans Hypothetical
           protein D1044.7 protein.
          Length = 400

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
 Frame = -1

Query: 696 SIYGSASTSVNDNNTQPANISLTSTRNTEFC-ISSFLSRY 580
           ++  S  T   DNN QP N  +T   NT FC  SS   RY
Sbjct: 357 NLCSSGQTVQLDNNNQPINCLVTVCPNTSFCQYSSSGQRY 396


>Z98877-16|CAH60800.1|  975|Caenorhabditis elegans Hypothetical
           protein Y69H2.10b protein.
          Length = 975

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 17/48 (35%), Positives = 19/48 (39%)
 Frame = -2

Query: 506 PASRATAPRPAGPSTACNDATRTAGDAPL*TENSLPFCHDRANKSSSC 363
           P+   T   PA PSTAC  AT T+        NS   C  R      C
Sbjct: 274 PSMGTTTKPPAAPSTACGSATCTSTQVCASPLNSTQTCIPRLPDRRYC 321


>Z98877-15|CAB63407.3|  572|Caenorhabditis elegans Hypothetical
           protein Y69H2.10a protein.
          Length = 572

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 17/48 (35%), Positives = 19/48 (39%)
 Frame = -2

Query: 506 PASRATAPRPAGPSTACNDATRTAGDAPL*TENSLPFCHDRANKSSSC 363
           P+   T   PA PSTAC  AT T+        NS   C  R      C
Sbjct: 274 PSMGTTTKPPAAPSTACGSATCTSTQVCASPLNSTQTCIPRLPDRRYC 321


>Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical protein
            K04H4.2c protein.
          Length = 1446

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = -2

Query: 536  RFCSQPRGGGPASRATAPRPAGPSTACNDATRTAG 432
            +   +P  G P      PR  GPS++C+D + ++G
Sbjct: 1246 QMAQKPNYGRPLHSYMPPRFGGPSSSCSDGSLSSG 1280


>Z27078-2|CAA81588.3|  788|Caenorhabditis elegans Hypothetical
           protein K04H4.2b protein.
          Length = 788

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = -2

Query: 536 RFCSQPRGGGPASRATAPRPAGPSTACNDATRTAG 432
           +   +P  G P      PR  GPS++C+D + ++G
Sbjct: 588 QMAQKPNYGRPLHSYMPPRFGGPSSSCSDGSLSSG 622


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,023,390
Number of Sequences: 27780
Number of extensions: 402165
Number of successful extensions: 1134
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1049
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1133
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2318293978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)