Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP13_FL5_P10
         (913 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0744 - 22704637-22705341                                         30   2.9  
03_06_0189 + 32214702-32215154                                         29   3.9  
06_01_0112 - 876213-876857,877245-877622,877707-877813,878271-87...    29   6.8  
09_06_0076 + 20710482-20710670,20711313-20711547,20711664-207116...    28   9.0  

>12_02_0744 - 22704637-22705341
          Length = 234

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +1

Query: 574 RAPPGVEPAA*FDSTRGISPGPDTGR 651
           R PP   PA    S+RG+SP P +GR
Sbjct: 96  RRPPRSSPAPTSSSSRGVSPPPTSGR 121


>03_06_0189 + 32214702-32215154
          Length = 150

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = -3

Query: 602 AAGSTPGGALPSIPLSFSFATILPPESKIFGFPEAA 495
           AA + P  ALP +P   +  T LPP   I   P+AA
Sbjct: 30  AAAAAPPAALPVLPAVPALPTTLPPMPAIPAVPQAA 65


>06_01_0112 -
           876213-876857,877245-877622,877707-877813,878271-878319,
           880413-880637,880741-880935
          Length = 532

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 17/49 (34%), Positives = 25/49 (51%)
 Frame = -3

Query: 653 ILPVSGPGEIPRVESN*AAGSTPGGALPSIPLSFSFATILPPESKIFGF 507
           I+P+SG   +P   ++ +  + P  ALP  PL+   ATI       FGF
Sbjct: 220 IVPLSGKSYVPDENNSESVDAKPEPALPFNPLAARAATISLSAFGPFGF 268


>09_06_0076 + 20710482-20710670,20711313-20711547,20711664-20711689,
            20712000-20712293,20712603-20712728,20712827-20712896,
            20712992-20713182,20713394-20713519,20713878-20714279,
            20714364-20714758,20714861-20715315,20715403-20715524,
            20715653-20715693,20716026-20716129,20716363-20716576,
            20717667-20717780,20718576-20718612
          Length = 1046

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 18/54 (33%), Positives = 24/54 (44%)
 Frame = -2

Query: 621  PC*VKLSRRLHSWWCSSVNSFKFQLCNHTPPGVQNLWFPGSCPPSHCSNVGGSL 460
            PC   L R   S W + V++   Q C  + P  +   +P   PP   S VGG L
Sbjct: 936  PCKTSLPRESASAWWTQVDTVSGQGCGESSPLCRPPAYPPE-PPVVLSLVGGQL 988


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,712,436
Number of Sequences: 37544
Number of extensions: 533695
Number of successful extensions: 1346
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1295
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1346
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)