Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_FL5_P03
(860 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00046-6|AAN65305.1| 422|Caenorhabditis elegans Mammalian zak k... 31 1.4
U00046-5|AAC47047.4| 516|Caenorhabditis elegans Mammalian zak k... 31 1.4
Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical p... 30 1.8
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 30 2.4
Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical pr... 29 3.2
U61950-6|AAC24291.1| 528|Caenorhabditis elegans Nuclear hormone... 29 3.2
U23178-5|AAN63417.1| 439|Caenorhabditis elegans Vh1 dual-specif... 29 3.2
U23178-4|AAK68300.1| 606|Caenorhabditis elegans Vh1 dual-specif... 29 3.2
U23178-3|AAK68299.1| 657|Caenorhabditis elegans Vh1 dual-specif... 29 3.2
AY585194-1|AAS91377.1| 657|Caenorhabditis elegans VH1-like phos... 29 3.2
AL132862-11|CAB60541.1| 396|Caenorhabditis elegans Hypothetical... 29 3.2
AF273791-1|AAG15139.1| 525|Caenorhabditis elegans nuclear recep... 29 3.2
AF273790-1|AAG15138.1| 534|Caenorhabditis elegans nuclear recep... 29 3.2
AF273787-1|AAG15135.1| 527|Caenorhabditis elegans nuclear recep... 29 3.2
AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein. 29 3.2
AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical... 29 4.3
AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical... 29 4.3
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 28 7.4
U41536-1|AAK39239.1| 1595|Caenorhabditis elegans Kinesin-like pr... 28 7.4
AF067611-2|AAW88406.1| 2302|Caenorhabditis elegans Cadherin fami... 28 9.8
>U00046-6|AAN65305.1| 422|Caenorhabditis elegans Mammalian zak
kinase homolog protein1, isoform b protein.
Length = 422
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 223 GTVSSTFDHPFSTPVLRSYWHRNQ 294
G +++ F H S+P LR +WHR Q
Sbjct: 306 GHLNNGFHHTTSSPQLRGFWHRKQ 329
>U00046-5|AAC47047.4| 516|Caenorhabditis elegans Mammalian zak
kinase homolog protein1, isoform a protein.
Length = 516
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 223 GTVSSTFDHPFSTPVLRSYWHRNQ 294
G +++ F H S+P LR +WHR Q
Sbjct: 400 GHLNNGFHHTTSSPQLRGFWHRKQ 423
>Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical
protein T20D3.11 protein.
Length = 1843
Score = 30.3 bits (65), Expect = 1.8
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 520 PYASSHPPLRSRLHQPDHQIPDS 588
P +S HPPL S H +H PD+
Sbjct: 66 PTSSHHPPLNSSSHHSNHNYPDT 88
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 29.9 bits (64), Expect = 2.4
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = +3
Query: 534 PPSPAISATSTRSSNPRFHTPTTPDLTSISINPLNAVLX-GIRAGGKSLRLSSEAPSAYL 710
P S I++TS+ S+ P + T T + + V G +S SS +PS +
Sbjct: 695 PDSTIITSTSSTSTRPGTSSTATDSPTMDDTSKTSTVTSEGTTLSIESTE-SSASPSDFT 753
Query: 711 TPSSLGMAKGVSPPYFQVNDESQAS 785
TP +G VS Q + S +S
Sbjct: 754 TPDFIGFTSSVSRTSEQYSSSSPSS 778
>Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical protein
K04G2.8b protein.
Length = 1188
Score = 29.5 bits (63), Expect = 3.2
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +1
Query: 226 TVSSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHH---KRLP--RRVSCQS*GCRF 390
T S + HP ++P+ +S HR Q + A +RLL +P R +S + G +
Sbjct: 807 TSSPAWSHPDTSPIPKSSSHRTQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQ 866
Query: 391 SFRP*PQNTSHS 426
P P+ SHS
Sbjct: 867 YLEPEPERRSHS 878
>Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical protein
K04G2.8a protein.
Length = 1186
Score = 29.5 bits (63), Expect = 3.2
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +1
Query: 226 TVSSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHH---KRLP--RRVSCQS*GCRF 390
T S + HP ++P+ +S HR Q + A +RLL +P R +S + G +
Sbjct: 805 TSSPAWSHPDTSPIPKSSSHRTQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQ 864
Query: 391 SFRP*PQNTSHS 426
P P+ SHS
Sbjct: 865 YLEPEPERRSHS 876
>U61950-6|AAC24291.1| 528|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 46, isoform a protein.
Length = 528
Score = 29.5 bits (63), Expect = 3.2
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 514 SRPYASSHPPLRSRLHQPDHQIPDSIHQP-PQT*HPFPSIP*TPYXKEFAPGVKASG 681
S + +++ L S P HQ P S+HQP P + F + P +E AP SG
Sbjct: 33 SSSFFNTNHQLNSHYSSPIHQPPTSLHQPIPMMQNQFKASP-PQSDQETAPTTPGSG 88
>U23178-5|AAN63417.1| 439|Caenorhabditis elegans Vh1
dual-specificity phosphatasefamily protein 1, isoform c
protein.
Length = 439
Score = 29.5 bits (63), Expect = 3.2
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = +3
Query: 537 PSPAISATSTRSSNPRFHTPTTPDLTSISI---NPLNAVLXGIRAGGKSLRLSSEAPSAY 707
P+PA S++S+ SS P F + +S SI NP A + AG S+ S + S
Sbjct: 343 PTPAASSSSSTSSEPSFDFSSFESSSSSSIVVENPFFASTE-VPAGSSSISTPSGSQSTP 401
Query: 708 LTPSSLGMAKGVSPPYFQV 764
+ SS ++ +F+V
Sbjct: 402 ASASSSAASRCRMKGFFKV 420
>U23178-4|AAK68300.1| 606|Caenorhabditis elegans Vh1
dual-specificity phosphatasefamily protein 1, isoform b
protein.
Length = 606
Score = 29.5 bits (63), Expect = 3.2
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = +3
Query: 537 PSPAISATSTRSSNPRFHTPTTPDLTSISI---NPLNAVLXGIRAGGKSLRLSSEAPSAY 707
P+PA S++S+ SS P F + +S SI NP A + AG S+ S + S
Sbjct: 447 PTPAASSSSSTSSEPSFDFSSFESSSSSSIVVENPFFASTE-VPAGSSSISTPSGSQSTP 505
Query: 708 LTPSSLGMAKGVSPPYFQV 764
+ SS ++ +F+V
Sbjct: 506 ASASSSAASRCRMKGFFKV 524
>U23178-3|AAK68299.1| 657|Caenorhabditis elegans Vh1
dual-specificity phosphatasefamily protein 1, isoform a
protein.
Length = 657
Score = 29.5 bits (63), Expect = 3.2
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = +3
Query: 537 PSPAISATSTRSSNPRFHTPTTPDLTSISI---NPLNAVLXGIRAGGKSLRLSSEAPSAY 707
P+PA S++S+ SS P F + +S SI NP A + AG S+ S + S
Sbjct: 498 PTPAASSSSSTSSEPSFDFSSFESSSSSSIVVENPFFASTE-VPAGSSSISTPSGSQSTP 556
Query: 708 LTPSSLGMAKGVSPPYFQV 764
+ SS ++ +F+V
Sbjct: 557 ASASSSAASRCRMKGFFKV 575
>AY585194-1|AAS91377.1| 657|Caenorhabditis elegans VH1-like
phosphatase 1 protein.
Length = 657
Score = 29.5 bits (63), Expect = 3.2
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = +3
Query: 537 PSPAISATSTRSSNPRFHTPTTPDLTSISI---NPLNAVLXGIRAGGKSLRLSSEAPSAY 707
P+PA S++S+ SS P F + +S SI NP A + AG S+ S + S
Sbjct: 498 PTPAASSSSSTSSEPSFDFSSFESSSSSSIVVENPFFASTE-VPAGSSSISTPSGSQSTP 556
Query: 708 LTPSSLGMAKGVSPPYFQV 764
+ SS ++ +F+V
Sbjct: 557 ASASSSAASRCRMKGFFKV 575
>AL132862-11|CAB60541.1| 396|Caenorhabditis elegans Hypothetical
protein Y73F8A.16 protein.
Length = 396
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 254 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRD 358
F L F++TG E KS V + S+ +I GYR+
Sbjct: 37 FPELNFNITGLEEKSRYVVLLSIEKYDNIRYGYRN 71
>AF273791-1|AAG15139.1| 525|Caenorhabditis elegans nuclear receptor
NHR-46 protein.
Length = 525
Score = 29.5 bits (63), Expect = 3.2
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 514 SRPYASSHPPLRSRLHQPDHQIPDSIHQP-PQT*HPFPSIP*TPYXKEFAPGVKASG 681
S + +++ L S P HQ P S+HQP P + F + P +E AP SG
Sbjct: 30 SSSFFNTNHQLNSHYSSPIHQPPTSLHQPIPMMQNQFKASP-PQSDQETAPTTPGSG 85
>AF273790-1|AAG15138.1| 534|Caenorhabditis elegans nuclear receptor
NHR-46 protein.
Length = 534
Score = 29.5 bits (63), Expect = 3.2
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 514 SRPYASSHPPLRSRLHQPDHQIPDSIHQP-PQT*HPFPSIP*TPYXKEFAPGVKASG 681
S + +++ L S P HQ P S+HQP P + F + P +E AP SG
Sbjct: 39 SSSFFNTNHQLNSHYSSPIHQPPTSLHQPIPMMQNQFKASP-PQSDQETAPTTPGSG 94
>AF273787-1|AAG15135.1| 527|Caenorhabditis elegans nuclear receptor
NHR-46 protein.
Length = 527
Score = 29.5 bits (63), Expect = 3.2
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 514 SRPYASSHPPLRSRLHQPDHQIPDSIHQP-PQT*HPFPSIP*TPYXKEFAPGVKASG 681
S + +++ L S P HQ P S+HQP P + F + P +E AP SG
Sbjct: 32 SSSFFNTNHQLNSHYSSPIHQPPTSLHQPIPMMQNQFKASP-PQSDQETAPTTPGSG 87
>AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein.
Length = 1186
Score = 29.5 bits (63), Expect = 3.2
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +1
Query: 226 TVSSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHH---KRLP--RRVSCQS*GCRF 390
T S + HP ++P+ +S HR Q + A +RLL +P R +S + G +
Sbjct: 805 TSSPAWSHPDTSPIPKSSSHRTQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQ 864
Query: 391 SFRP*PQNTSHS 426
P P+ SHS
Sbjct: 865 YLEPEPERRSHS 876
>AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical
protein Y57A10A.18b protein.
Length = 1459
Score = 29.1 bits (62), Expect = 4.3
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = +3
Query: 528 IKPPSPAISATSTRSSNPRFHTPTTP-DLTSISINPLNAVLXGIRAGGKSLRLSSEAPSA 704
+KPP + A S P P P + NP+ G + + +++EAP+A
Sbjct: 1160 VKPPPVQVVAPSPSVIPPPILPPPPPAGVIGQQRNPIG--------GARQVPVAAEAPAA 1211
Query: 705 YLTPSSLGMAKGVSPP 752
PS + +G SPP
Sbjct: 1212 AAAPSRARVPRGPSPP 1227
>AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical
protein Y57A10A.18a protein.
Length = 1456
Score = 29.1 bits (62), Expect = 4.3
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = +3
Query: 528 IKPPSPAISATSTRSSNPRFHTPTTP-DLTSISINPLNAVLXGIRAGGKSLRLSSEAPSA 704
+KPP + A S P P P + NP+ G + + +++EAP+A
Sbjct: 1160 VKPPPVQVVAPSPSVIPPPILPPPPPAGVIGQQRNPIG--------GARQVPVAAEAPAA 1211
Query: 705 YLTPSSLGMAKGVSPP 752
PS + +G SPP
Sbjct: 1212 AAAPSRARVPRGPSPP 1227
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 28.3 bits (60), Expect = 7.4
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +3
Query: 537 PSPAISATSTRSSNPRFHTPTTPDLTSISINP-LNAVLXGIRAGGKSLRLSSEAPSAYLT 713
P+P + T+T +NP TPTT + +I +P A L + S+ AP+A +
Sbjct: 490 PTPVPTTTNTPPANPTTATPTT--VGTIGTSPTAPANLTTPTTAPVNPTSSTTAPTAPVN 547
Query: 714 PSSLGMAKGVSP 749
P+S A V P
Sbjct: 548 PTSPTTAPTVPP 559
>U41536-1|AAK39239.1| 1595|Caenorhabditis elegans Kinesin-like protein
protein 4,isoform a protein.
Length = 1595
Score = 28.3 bits (60), Expect = 7.4
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = +3
Query: 549 ISATSTRSSNPRFHTPTTPDLTSISINPLNAVLXGIRAGGKSLRLSSEAPSAYLTPSSL- 725
I+ RS P + + +TSI I+P N L GI SLR+ + + P ++
Sbjct: 1475 INGVEKRSDTPMSISSSNSMVTSI-ISPYNDKLTGIMEESNSLRIETVPTRSSTVPETMC 1533
Query: 726 -GMAKGVSP 749
AK +SP
Sbjct: 1534 FSAAKKLSP 1542
>AF067611-2|AAW88406.1| 2302|Caenorhabditis elegans Cadherin family
protein 10 protein.
Length = 2302
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 552 SATSTRSSNPRFHTPTTPDLTSISI-NPLNAVLXGI 656
SA T++ HTPT P + +++ PL + + GI
Sbjct: 1556 SAHQTQTLRSAVHTPTVPKILGVTVPEPLRSTIPGI 1591
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,350,669
Number of Sequences: 27780
Number of extensions: 381781
Number of successful extensions: 1178
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1094
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1173
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2150453690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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