BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_FL5_P01
(964 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071124-1|AAL48746.1| 420|Drosophila melanogaster RE17165p pro... 33 0.59
AE014296-850|AAF47902.2| 420|Drosophila melanogaster CG15021-PA... 33 0.59
BT003763-1|AAO41442.1| 652|Drosophila melanogaster RE39251p pro... 30 5.5
AY075422-1|AAL68238.1| 1674|Drosophila melanogaster LD43328p pro... 30 5.5
AY069625-1|AAL39770.1| 268|Drosophila melanogaster LD39545p pro... 30 5.5
AY058563-1|AAL13792.1| 652|Drosophila melanogaster LD25239p pro... 30 5.5
AE014296-1420|AAF50445.2| 652|Drosophila melanogaster CG7185-PA... 30 5.5
AE014296-964|AAN12098.1| 682|Drosophila melanogaster CG10625-PC... 30 5.5
AE014296-963|AAF50773.2| 682|Drosophila melanogaster CG10625-PB... 30 5.5
AE014296-962|AAN12097.1| 268|Drosophila melanogaster CG10625-PD... 30 5.5
AE014296-961|AAN12096.1| 268|Drosophila melanogaster CG10625-PA... 30 5.5
AE013599-760|AAF59009.3| 1629|Drosophila melanogaster CG8213-PA ... 30 5.5
>AY071124-1|AAL48746.1| 420|Drosophila melanogaster RE17165p
protein.
Length = 420
Score = 33.1 bits (72), Expect = 0.59
Identities = 28/100 (28%), Positives = 30/100 (30%)
Frame = +1
Query: 622 PPHPXEXTXILQPPLPXARDKGXPPXMXXXWXPASXXSGXRKXPPXAPSXEXXXRSXPQR 801
PP P QPP P + G P P + R PP P PQ
Sbjct: 169 PPQPQPPAP--QPPSPPSPQPG--PEYLPPDQPKPRPTPSRPQPPPPPPPR------PQP 218
Query: 802 HPGXPTXXPXXPXXXXPXGXXGPICPXXXPGRXXXEPXXP 921
PG P P P GP P PG P P
Sbjct: 219 TPGYGPPPPPPPPKPQPTPGYGPPTPPPGPGPAQPAPQPP 258
Score = 32.7 bits (71), Expect = 0.77
Identities = 30/128 (23%), Positives = 30/128 (23%)
Frame = +1
Query: 565 PPXHATGREARTCCXVXQCPPHPXEXTXILQPPLPXARDKGXPPXMXXXWXPASXXSGXR 744
PP T R Q P P P G P P S
Sbjct: 80 PPPQPTPPAPRPSYGPPQTQPPRPPPQPTPSAPAPPPPSYGPPQTPPPRPPPQPTPSAPA 139
Query: 745 KXPPXAPSXEXXXRSXPQRHPGXPTXXPXXPXXXXPXGXXGPICPXXXPGRXXXEPXXPX 924
P P R PQ P P P P P P PG P P
Sbjct: 140 PPPSYGPPQTPPPRPPPQPTPSAPA-PSYGPPQPQPPAPQPPSPPSPQPGPEYLPPDQPK 198
Query: 925 XXEXPSXP 948
PS P
Sbjct: 199 PRPTPSRP 206
>AE014296-850|AAF47902.2| 420|Drosophila melanogaster CG15021-PA
protein.
Length = 420
Score = 33.1 bits (72), Expect = 0.59
Identities = 28/100 (28%), Positives = 30/100 (30%)
Frame = +1
Query: 622 PPHPXEXTXILQPPLPXARDKGXPPXMXXXWXPASXXSGXRKXPPXAPSXEXXXRSXPQR 801
PP P QPP P + G P P + R PP P PQ
Sbjct: 169 PPQPQPPAP--QPPSPPSPQPG--PEYLPPDQPKPRPTPSRPQPPPPPPPR------PQP 218
Query: 802 HPGXPTXXPXXPXXXXPXGXXGPICPXXXPGRXXXEPXXP 921
PG P P P GP P PG P P
Sbjct: 219 TPGYGPPPPPPPPKPQPTPGYGPPTPPPGPGPAQPAPQPP 258
Score = 32.7 bits (71), Expect = 0.77
Identities = 30/128 (23%), Positives = 30/128 (23%)
Frame = +1
Query: 565 PPXHATGREARTCCXVXQCPPHPXEXTXILQPPLPXARDKGXPPXMXXXWXPASXXSGXR 744
PP T R Q P P P G P P S
Sbjct: 80 PPPQPTPPAPRPSYGPPQTQPPRPPPQPTPSAPAPPPPSYGPPQTPPPRPPPQPTPSAPA 139
Query: 745 KXPPXAPSXEXXXRSXPQRHPGXPTXXPXXPXXXXPXGXXGPICPXXXPGRXXXEPXXPX 924
P P R PQ P P P P P P PG P P
Sbjct: 140 PPPSYGPPQTPPPRPPPQPTPSAPA-PSYGPPQPQPPAPQPPSPPSPQPGPEYLPPDQPK 198
Query: 925 XXEXPSXP 948
PS P
Sbjct: 199 PRPTPSRP 206
>BT003763-1|AAO41442.1| 652|Drosophila melanogaster RE39251p
protein.
Length = 652
Score = 29.9 bits (64), Expect = 5.5
Identities = 18/56 (32%), Positives = 19/56 (33%)
Frame = +1
Query: 793 PQRHPGXPTXXPXXPXXXXPXGXXGPICPXXXPGRXXXEPXXPXXXEXPSXPXGRG 960
P PG P P P P G GP P PG P P P+ P G
Sbjct: 528 PPGPPGPP--GPKGPTKPGPFGPPGPPGPPGPPGPTRPGPYGPPGPPGPTGPTRPG 581
>AY075422-1|AAL68238.1| 1674|Drosophila melanogaster LD43328p
protein.
Length = 1674
Score = 29.9 bits (64), Expect = 5.5
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = +3
Query: 294 TSXFRPYRGVDGPRSTLGFGRTLSRKCKSSTDITNTLPSSRGRSHGPAL 440
TS FR G R G R + C++ T TLPSS R++GP +
Sbjct: 67 TSGFRSIETNGGGRKLFGGYRITPKHCRA----TKTLPSSDPRANGPTI 111
>AY069625-1|AAL39770.1| 268|Drosophila melanogaster LD39545p
protein.
Length = 268
Score = 29.9 bits (64), Expect = 5.5
Identities = 18/56 (32%), Positives = 19/56 (33%)
Frame = +1
Query: 793 PQRHPGXPTXXPXXPXXXXPXGXXGPICPXXXPGRXXXEPXXPXXXEXPSXPXGRG 960
P PG P P P P G GP P PG P P P+ P G
Sbjct: 144 PPGPPGPP--GPKGPTKPGPFGPPGPPGPPGPPGPTRPGPYGPPGPPGPTGPTRPG 197
>AY058563-1|AAL13792.1| 652|Drosophila melanogaster LD25239p
protein.
Length = 652
Score = 29.9 bits (64), Expect = 5.5
Identities = 17/61 (27%), Positives = 22/61 (36%)
Frame = +1
Query: 691 PPXMXXXWXPASXXSGXRKXPPXAPSXEXXXRSXPQRHPGXPTXXPXXPXXXXPXGXXGP 870
PP M P G ++ PP PS + P + PG P P P GP
Sbjct: 258 PPRMQPPMHPQGGLMGNQQPPPRYPSAQG---QWPGQRPGGPRPGPPNGPPQRPMFQGGP 314
Query: 871 I 873
+
Sbjct: 315 M 315
>AE014296-1420|AAF50445.2| 652|Drosophila melanogaster CG7185-PA
protein.
Length = 652
Score = 29.9 bits (64), Expect = 5.5
Identities = 17/61 (27%), Positives = 22/61 (36%)
Frame = +1
Query: 691 PPXMXXXWXPASXXSGXRKXPPXAPSXEXXXRSXPQRHPGXPTXXPXXPXXXXPXGXXGP 870
PP M P G ++ PP PS + P + PG P P P GP
Sbjct: 258 PPRMQPPMHPQGGLMGNQQPPPRYPSAQG---QWPGQRPGGPRPGPPNGPPQRPMFQGGP 314
Query: 871 I 873
+
Sbjct: 315 M 315
>AE014296-964|AAN12098.1| 682|Drosophila melanogaster CG10625-PC,
isoform C protein.
Length = 682
Score = 29.9 bits (64), Expect = 5.5
Identities = 18/56 (32%), Positives = 19/56 (33%)
Frame = +1
Query: 793 PQRHPGXPTXXPXXPXXXXPXGXXGPICPXXXPGRXXXEPXXPXXXEXPSXPXGRG 960
P PG P P P P G GP P PG P P P+ P G
Sbjct: 558 PPGPPGPP--GPKGPTKPGPFGPPGPPGPPGPPGPTRPGPYGPPGPPGPTGPTRPG 611
>AE014296-963|AAF50773.2| 682|Drosophila melanogaster CG10625-PB,
isoform B protein.
Length = 682
Score = 29.9 bits (64), Expect = 5.5
Identities = 18/56 (32%), Positives = 19/56 (33%)
Frame = +1
Query: 793 PQRHPGXPTXXPXXPXXXXPXGXXGPICPXXXPGRXXXEPXXPXXXEXPSXPXGRG 960
P PG P P P P G GP P PG P P P+ P G
Sbjct: 558 PPGPPGPP--GPKGPTKPGPFGPPGPPGPPGPPGPTRPGPYGPPGPPGPTGPTRPG 611
>AE014296-962|AAN12097.1| 268|Drosophila melanogaster CG10625-PD,
isoform D protein.
Length = 268
Score = 29.9 bits (64), Expect = 5.5
Identities = 18/56 (32%), Positives = 19/56 (33%)
Frame = +1
Query: 793 PQRHPGXPTXXPXXPXXXXPXGXXGPICPXXXPGRXXXEPXXPXXXEXPSXPXGRG 960
P PG P P P P G GP P PG P P P+ P G
Sbjct: 144 PPGPPGPP--GPKGPTKPGPFGPPGPPGPPGPPGPTRPGPYGPPGPPGPTGPTRPG 197
>AE014296-961|AAN12096.1| 268|Drosophila melanogaster CG10625-PA,
isoform A protein.
Length = 268
Score = 29.9 bits (64), Expect = 5.5
Identities = 18/56 (32%), Positives = 19/56 (33%)
Frame = +1
Query: 793 PQRHPGXPTXXPXXPXXXXPXGXXGPICPXXXPGRXXXEPXXPXXXEXPSXPXGRG 960
P PG P P P P G GP P PG P P P+ P G
Sbjct: 144 PPGPPGPP--GPKGPTKPGPFGPPGPPGPPGPPGPTRPGPYGPPGPPGPTGPTRPG 197
>AE013599-760|AAF59009.3| 1629|Drosophila melanogaster CG8213-PA
protein.
Length = 1629
Score = 29.9 bits (64), Expect = 5.5
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = +3
Query: 294 TSXFRPYRGVDGPRSTLGFGRTLSRKCKSSTDITNTLPSSRGRSHGPAL 440
TS FR G R G R + C++ T TLPSS R++GP +
Sbjct: 67 TSGFRSIETNGGGRKLFGGYRITPKHCRA----TKTLPSSDPRANGPTI 111
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,660,117
Number of Sequences: 53049
Number of extensions: 779528
Number of successful extensions: 2167
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1856
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2108
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4812612705
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -