Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_FL5_P01
(964 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 34 0.13
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 34 0.13
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 33 0.40
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 33 0.40
Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical pr... 31 0.92
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical pr... 29 3.7
AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen stru... 29 3.7
AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen stru... 29 3.7
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 29 3.7
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 29 3.7
Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical pr... 29 4.9
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 29 4.9
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 28 8.6
L23649-3|AAA27909.2| 601|Caenorhabditis elegans Tyrosinase prot... 28 8.6
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 34.3 bits (75), Expect = 0.13
Identities = 28/116 (24%), Positives = 31/116 (26%), Gaps = 3/116 (2%)
Frame = +1
Query: 622 PPHPXEXTXIL--QPPLPXARDKGXPPXMXXXW-XPASXXSGXRKXPPXAPSXEXXXRSX 792
PP P T + PP P + PP W P G PP P
Sbjct: 264 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPS 323
Query: 793 PQRHPGXPTXXPXXPXXXXPXGXXGPICPXXXPGRXXXEPXXPXXXEXPSXPXGRG 960
PG P P G P P P P P+ P G G
Sbjct: 324 RFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHG 379
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 34.3 bits (75), Expect = 0.13
Identities = 28/116 (24%), Positives = 31/116 (26%), Gaps = 3/116 (2%)
Frame = +1
Query: 622 PPHPXEXTXIL--QPPLPXARDKGXPPXMXXXW-XPASXXSGXRKXPPXAPSXEXXXRSX 792
PP P T + PP P + PP W P G PP P
Sbjct: 274 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPS 333
Query: 793 PQRHPGXPTXXPXXPXXXXPXGXXGPICPXXXPGRXXXEPXXPXXXEXPSXPXGRG 960
PG P P G P P P P P+ P G G
Sbjct: 334 RFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHG 389
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 32.7 bits (71), Expect = 0.40
Identities = 31/116 (26%), Positives = 39/116 (33%), Gaps = 3/116 (2%)
Frame = +1
Query: 619 CPPHPXEXTXILQPPLPXARDKGXPPXMXXXWXPASXXSGXRKXPPXAPSXEXXXRSXPQ 798
C P P PP P D G P A+ K PP P + +
Sbjct: 145 CKPCPQGPPGPPGPPGPPG-DSGEPGSPGLPGQDAAPGEPGPKGPPGPPGAPGAPGTPGE 203
Query: 799 RHPGXPTXX-PXXPXXXXPXGXXGPICPXXXPGRXXXE--PXXPXXXEXPSXPXGR 957
PG P P P P G GP P PG+ + P P + P+ P G+
Sbjct: 204 --PGVPAQSEPLIPGEPGPPGEAGPQGPPGSPGQPGADGSPGQP-GPKGPNGPDGQ 256
Score = 28.7 bits (61), Expect = 6.5
Identities = 20/73 (27%), Positives = 22/73 (30%)
Frame = +1
Query: 742 RKXPPXAPSXEXXXRSXPQRHPGXPTXXPXXPXXXXPXGXXGPICPXXXPGRXXXEPXXP 921
R P AP PQ+ T P P P G GP P G P P
Sbjct: 116 RPGKPGAPGLPGNPGRPPQQPCEPITPPPCKPCPQGPPGPPGPPGPPGDSGE-PGSPGLP 174
Query: 922 XXXEXPSXPXGRG 960
P P +G
Sbjct: 175 GQDAAPGEPGPKG 187
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 32.7 bits (71), Expect = 0.40
Identities = 31/116 (26%), Positives = 39/116 (33%), Gaps = 3/116 (2%)
Frame = +1
Query: 619 CPPHPXEXTXILQPPLPXARDKGXPPXMXXXWXPASXXSGXRKXPPXAPSXEXXXRSXPQ 798
C P P PP P D G P A+ K PP P + +
Sbjct: 145 CKPCPQGPPGPPGPPGPPG-DSGEPGSPGLPGQDAAPGEPGPKGPPGPPGAPGAPGTPGE 203
Query: 799 RHPGXPTXX-PXXPXXXXPXGXXGPICPXXXPGRXXXE--PXXPXXXEXPSXPXGR 957
PG P P P P G GP P PG+ + P P + P+ P G+
Sbjct: 204 --PGVPAQSEPLIPGEPGPPGEAGPQGPPGSPGQPGADGSPGQP-GPKGPNGPDGQ 256
Score = 28.7 bits (61), Expect = 6.5
Identities = 20/73 (27%), Positives = 22/73 (30%)
Frame = +1
Query: 742 RKXPPXAPSXEXXXRSXPQRHPGXPTXXPXXPXXXXPXGXXGPICPXXXPGRXXXEPXXP 921
R P AP PQ+ T P P P G GP P G P P
Sbjct: 116 RPGKPGAPGLPGNPGRPPQQPCEPITPPPCKPCPQGPPGPPGPPGPPGDSGE-PGSPGLP 174
Query: 922 XXXEXPSXPXGRG 960
P P +G
Sbjct: 175 GQDAAPGEPGPKG 187
>Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical
protein Y41E3.2 protein.
Length = 289
Score = 31.5 bits (68), Expect = 0.92
Identities = 22/70 (31%), Positives = 24/70 (34%)
Frame = +1
Query: 754 PXAPSXEXXXRSXPQRHPGXPTXXPXXPXXXXPXGXXGPICPXXXPGRXXXEPXXPXXXE 933
P P+ + PQ PG P P P P G GP P PG EP
Sbjct: 126 PCEPTTPPPCQPCPQGPPGPP-GQPGIPGDNGPPGEQGPKGPDAAPG----EPGPKGPIG 180
Query: 934 XPSXPXGRGA 963
P P GA
Sbjct: 181 PPGPPGQAGA 190
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 31.1 bits (67), Expect = 1.2
Identities = 32/116 (27%), Positives = 33/116 (28%), Gaps = 3/116 (2%)
Frame = +1
Query: 622 PPHPXEXTXILQPPLPXARDKGXPPXMXXXWXPASXXSGXRKXPPXAPSXEXXXRSXPQR 801
PP P L PP P + P PA K P P E PQ
Sbjct: 148 PPGPQGNKGPLGPPGPPGPE--GPNGTAGNKGPAGPPGPGGKPGPAGPPGENGRNGEPQP 205
Query: 802 -HPGXPTXXPXXPXXXXPXGXXGPICPXXXPGR--XXXEPXXPXXXEXPSXPXGRG 960
PG P P P P G G PG EP P P P G
Sbjct: 206 GSPGEP-GRPGQPGSRGPAGQPGKDGAQGGPGEKGANGEPGQPGRDGQPGRPGQPG 260
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical protein
C02C6.1b protein.
Length = 838
Score = 29.5 bits (63), Expect = 3.7
Identities = 21/89 (23%), Positives = 25/89 (28%), Gaps = 3/89 (3%)
Frame = +1
Query: 691 PPXMXXXWXPASXXSGXRKXPPXAPSXEXXXRSXPQRHPGXPTXXPXXPXXXXPXGXXG- 867
PP + P P AP P+ PG P P P G G
Sbjct: 749 PPLPMSDYRPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGM 808
Query: 868 --PICPXXXPGRXXXEPXXPXXXEXPSXP 948
P+ P P P P + P P
Sbjct: 809 YPPLIPTRVPTPSNGAPEIPARPQVPKRP 837
>Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical
protein C29F4.1 protein.
Length = 299
Score = 29.5 bits (63), Expect = 3.7
Identities = 20/73 (27%), Positives = 22/73 (30%)
Frame = +1
Query: 742 RKXPPXAPSXEXXXRSXPQRHPGXPTXXPXXPXXXXPXGXXGPICPXXXPGRXXXEPXXP 921
R P AP PQ+ T P P P G GP P G P P
Sbjct: 116 RPGKPGAPGLPGNPGRPPQQPCEPITPPPCKPCPAGPAGAPGPAGPAGDAG-ANGNPGAP 174
Query: 922 XXXEXPSXPXGRG 960
P P +G
Sbjct: 175 GQDGQPGAPGNKG 187
>Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.6 protein.
Length = 299
Score = 29.5 bits (63), Expect = 3.7
Identities = 20/73 (27%), Positives = 22/73 (30%)
Frame = +1
Query: 742 RKXPPXAPSXEXXXRSXPQRHPGXPTXXPXXPXXXXPXGXXGPICPXXXPGRXXXEPXXP 921
R P AP PQ+ T P P P G GP P G P P
Sbjct: 116 RPGKPGAPGLPGNPGRPPQQPCEPITPPPCKPCPAGPAGAPGPAGPAGDAG-ANGNPGAP 174
Query: 922 XXXEXPSXPXGRG 960
P P +G
Sbjct: 175 GNDGQPGAPGNKG 187
>Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.4 protein.
Length = 299
Score = 29.5 bits (63), Expect = 3.7
Identities = 20/73 (27%), Positives = 22/73 (30%)
Frame = +1
Query: 742 RKXPPXAPSXEXXXRSXPQRHPGXPTXXPXXPXXXXPXGXXGPICPXXXPGRXXXEPXXP 921
R P AP PQ+ T P P P G GP P G P P
Sbjct: 116 RPGKPGAPGLPGNPGRPPQQPCEPITPPPCKPCPAGPAGAPGPAGPAGDAG-ANGNPGAP 174
Query: 922 XXXEXPSXPXGRG 960
P P +G
Sbjct: 175 GNDGQPGAPGNKG 187
>AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-3) protein.
Length = 299
Score = 29.5 bits (63), Expect = 3.7
Identities = 20/73 (27%), Positives = 22/73 (30%)
Frame = +1
Query: 742 RKXPPXAPSXEXXXRSXPQRHPGXPTXXPXXPXXXXPXGXXGPICPXXXPGRXXXEPXXP 921
R P AP PQ+ T P P P G GP P G P P
Sbjct: 116 RPGKPGAPGLPGNPGRPPQQPCEPITPPPCKPCPAGPAGAPGPAGPAGDAG-ANGNPGAP 174
Query: 922 XXXEXPSXPXGRG 960
P P +G
Sbjct: 175 GNDGQPGAPGNKG 187
>AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-117) protein.
Length = 299
Score = 29.5 bits (63), Expect = 3.7
Identities = 20/73 (27%), Positives = 22/73 (30%)
Frame = +1
Query: 742 RKXPPXAPSXEXXXRSXPQRHPGXPTXXPXXPXXXXPXGXXGPICPXXXPGRXXXEPXXP 921
R P AP PQ+ T P P P G GP P G P P
Sbjct: 116 RPGKPGAPGLPGNPGRPPQQPCEPITPPPCKPCPAGPAGAPGPAGPAGDAG-ANGNPGAP 174
Query: 922 XXXEXPSXPXGRG 960
P P +G
Sbjct: 175 GNDGQPGAPGNKG 187
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 29.5 bits (63), Expect = 3.7
Identities = 22/80 (27%), Positives = 26/80 (32%), Gaps = 1/80 (1%)
Frame = +1
Query: 718 PASXXSGXRKXPPXAPSXEXXXRSXPQRHPGXP-TXXPXXPXXXXPXGXXGPICPXXXPG 894
P + S R P AP P + P P T P P P G GP P
Sbjct: 100 PGTPGSAGRPGKPGAPGLNGNP-GRPPKEPCEPLTPPPCKPCPEGPPGPAGP--PGPDGN 156
Query: 895 RXXXEPXXPXXXEXPSXPXG 954
+ P P E P+ G
Sbjct: 157 KGPLGPPGPPGPEGPNGEPG 176
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 29.5 bits (63), Expect = 3.7
Identities = 21/89 (23%), Positives = 25/89 (28%), Gaps = 3/89 (3%)
Frame = +1
Query: 691 PPXMXXXWXPASXXSGXRKXPPXAPSXEXXXRSXPQRHPGXPTXXPXXPXXXXPXGXXG- 867
PP + P P AP P+ PG P P P G G
Sbjct: 749 PPLPMSDYRPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGM 808
Query: 868 --PICPXXXPGRXXXEPXXPXXXEXPSXP 948
P+ P P P P + P P
Sbjct: 809 YPPLIPTRVPTPSNGAPEIPARPQVPKRP 837
>Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical
protein T11F9.9 protein.
Length = 299
Score = 29.1 bits (62), Expect = 4.9
Identities = 20/73 (27%), Positives = 22/73 (30%)
Frame = +1
Query: 742 RKXPPXAPSXEXXXRSXPQRHPGXPTXXPXXPXXXXPXGXXGPICPXXXPGRXXXEPXXP 921
R P AP PQ+ T P P P G GP P G P P
Sbjct: 116 RPGKPGAPGLPGNPGRPPQQPCDPITPPPCQPCPQGPPGPPGPPGPSGDAG-SNGNPGSP 174
Query: 922 XXXEXPSXPXGRG 960
P P +G
Sbjct: 175 GQDGQPGAPGNKG 187
>Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical
protein F55C10.3 protein.
Length = 266
Score = 29.1 bits (62), Expect = 4.9
Identities = 20/73 (27%), Positives = 22/73 (30%)
Frame = +1
Query: 742 RKXPPXAPSXEXXXRSXPQRHPGXPTXXPXXPXXXXPXGXXGPICPXXXPGRXXXEPXXP 921
R P AP PQ+ T P P P G GP P G P P
Sbjct: 83 RPGKPGAPGLPGNPGHPPQQPCDPITPPPCQPCPQGPPGPPGPPGPSGDAG-GNGNPGSP 141
Query: 922 XXXEXPSXPXGRG 960
P P +G
Sbjct: 142 GQDGQPGAPGNKG 154
>Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical
protein F55C10.2 protein.
Length = 299
Score = 29.1 bits (62), Expect = 4.9
Identities = 20/73 (27%), Positives = 22/73 (30%)
Frame = +1
Query: 742 RKXPPXAPSXEXXXRSXPQRHPGXPTXXPXXPXXXXPXGXXGPICPXXXPGRXXXEPXXP 921
R P AP PQ+ T P P P G GP P G P P
Sbjct: 116 RPGKPGAPGLPGNPGRPPQQPCDPITPPPCQPCPQGPPGPPGPPGPSGDAG-GNGNPGSP 174
Query: 922 XXXEXPSXPXGRG 960
P P +G
Sbjct: 175 GQDGQPGAPGNKG 187
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 29.1 bits (62), Expect = 4.9
Identities = 29/115 (25%), Positives = 36/115 (31%), Gaps = 2/115 (1%)
Frame = +1
Query: 619 CPPHPXEXTXILQPPLPXARDKGXPPXMXXXWXPASXXSGXRKXPPXAPSXEXXXRSXPQ 798
CP P PP + + G P P K PP AP S
Sbjct: 148 CPQGPPGPPGPPGPP-GDSGEPGSPGLPGQDAAPGEPGPKGPKGPPGAPGAPEHQESQE- 205
Query: 799 RHPGXPTXXPXXPXXXXPXGXXGPICPXXXPGRXXXE--PXXPXXXEXPSXPXGR 957
P P P P G GP P PG+ + P P + P+ P G+
Sbjct: 206 ----CPRGEPLIPGEPGPPGEAGPQGPPGSPGQPGADGSPGQP-GPKGPNGPDGQ 255
Score = 28.7 bits (61), Expect = 6.5
Identities = 20/73 (27%), Positives = 22/73 (30%)
Frame = +1
Query: 742 RKXPPXAPSXEXXXRSXPQRHPGXPTXXPXXPXXXXPXGXXGPICPXXXPGRXXXEPXXP 921
R P AP PQ+ T P P P G GP P G P P
Sbjct: 116 RPGKPGAPGLPGNPGRPPQQPCEPITPPPWKPCPQGPPGPPGPPGPPGDSGE-PGSPGLP 174
Query: 922 XXXEXPSXPXGRG 960
P P +G
Sbjct: 175 GQDAAPGEPGPKG 187
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 28.3 bits (60), Expect = 8.6
Identities = 26/116 (22%), Positives = 32/116 (27%), Gaps = 2/116 (1%)
Frame = +1
Query: 622 PPHPXEXTXILQPPLPXARDKGXPPXMXXXWXPASXXSGXRKXPPXAPSXEXXXRSXPQR 801
P H PP P P W P + PP P+ P+
Sbjct: 66 PQHHSVPPNSFAPP-PGQHHPQHPGMPPMEWRPPG---AEYQMPPGYPAGYPPYGMPPRH 121
Query: 802 HPGXPTXXPXXPXXXXPXGXXGPIC--PXXXPGRXXXEPXXPXXXEXPSXPXGRGA 963
HPG P P P G + P PG P P E + + A
Sbjct: 122 HPGYPHPAYGYPPPGAPYGYPPQMMRPPMMAPGDMVRMPPGPTPTEWAAQQQAQAA 177
>L23649-3|AAA27909.2| 601|Caenorhabditis elegans Tyrosinase protein
1 protein.
Length = 601
Score = 28.3 bits (60), Expect = 8.6
Identities = 8/24 (33%), Positives = 12/24 (50%)
Frame = -1
Query: 151 GDRYCEQRNERCESHCDTVCGWWN 80
G +C +R + +C CGW N
Sbjct: 535 GQNFCTRRRQWMAENCQATCGWCN 558
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,969,880
Number of Sequences: 27780
Number of extensions: 364490
Number of successful extensions: 1110
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 912
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1079
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2490012644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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