Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_FL5_O16
(905 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK131543-1|BAD18678.1| 205|Homo sapiens protein ( Homo sapiens ... 34 0.62
AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator su... 33 1.1
AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein. 33 1.1
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 33 1.1
AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein pro... 33 1.1
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 33 1.1
BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein. 31 4.3
AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein pro... 31 4.3
AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein pro... 31 4.3
U57592-1|AAC50822.1| 1266|Homo sapiens jumonji putative protein ... 31 5.7
BC098448-1|AAH98448.1| 410|Homo sapiens membrane-associated rin... 31 5.7
BC080554-1|AAH80554.1| 659|Homo sapiens splicing factor, argini... 31 5.7
BC048793-1|AAH48793.1| 357|Homo sapiens MARCH4 protein protein. 31 5.7
BC046246-1|AAH46246.1| 1246|Homo sapiens jumonji, AT rich intera... 31 5.7
AY358944-1|AAQ89303.1| 594|Homo sapiens SWAP2 protein. 31 5.7
AL136162-1|CAI15719.1| 1246|Homo sapiens jumonji, AT rich intera... 31 5.7
AL021938-1|CAI19873.1| 1246|Homo sapiens jumonji, AT rich intera... 31 5.7
AK122706-1|BAC85504.1| 814|Homo sapiens ISOFORM. protein. 31 5.7
AF042810-1|AAC82340.1| 659|Homo sapiens suppressor of white-apr... 31 5.7
AF042800-1|AAC82339.1| 659|Homo sapiens suppressor of white apr... 31 5.7
AB037820-1|BAA92637.1| 452|Homo sapiens KIAA1399 protein protein. 31 5.7
U19345-1|AAC36392.1| 935|Homo sapiens AR1 protein. 31 7.6
M95667-1|AAC37531.1| 165|Homo sapiens c-erb B2/neu protein prot... 31 7.6
M11730-1|AAA75493.1| 1255|Homo sapiens protein ( Human tyrosine ... 31 7.6
BX247885-5|CAI95721.1| 1960|Homo sapiens protein ( Human DNA seq... 31 7.6
AY208911-1|AAO18082.1| 1255|Homo sapiens v-erb-b2 erythroblastic... 31 7.6
AY065978-1|AAL40897.1| 544|Homo sapiens extracellular signal-re... 31 7.6
AL031346-1|CAB42440.1| 1641|Homo sapiens dJ597B2.1 (transcriptio... 31 7.6
AK128129-1|BAC87287.1| 467|Homo sapiens . protein. 31 7.6
AK074727-1|BAC11165.1| 653|Homo sapiens protein ( Homo sapiens ... 31 7.6
AK024427-1|BAB15717.1| 349|Homo sapiens FLJ00016 protein protein. 31 7.6
AB006630-1|BAA22961.1| 1716|Homo sapiens KIAA0292 protein. 31 7.6
>AK131543-1|BAD18678.1| 205|Homo sapiens protein ( Homo sapiens
cDNA FLJ16779 fis, clone BRHIP3038037. ).
Length = 205
Score = 34.3 bits (75), Expect = 0.62
Identities = 32/105 (30%), Positives = 44/105 (41%), Gaps = 2/105 (1%)
Frame = -1
Query: 455 RSIHAPKGPG*GER-RAHRVAGPTMPPAQAPVPRACADEWPKFGRAPPASALSIWHTPDH 279
R H+P G R R+ R P PP Q P+ R+P A+A + P H
Sbjct: 95 RGRHSPAEKRRGRRARSGRSRSPWCPPIQEAPGCPALGPRPRSARSPRAAAST--PPPPH 152
Query: 278 AQHASIDRQPTGRVSVPESRTVFSVGM-SRPRFRPRGPSVRIRRG 147
S + P + P+ R ++ + S PR RP G S R RG
Sbjct: 153 PVPPSSPQPP----AQPQPRVTAALRLPSHPRLRPLGASRRPERG 193
>AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator subunit
SRm300 protein.
Length = 2296
Score = 33.5 bits (73), Expect = 1.1
Identities = 34/109 (31%), Positives = 46/109 (42%), Gaps = 6/109 (5%)
Frame = -1
Query: 524 RSGARTGGSPDVAPFRRLSTDTSRSIHAPK---GPG*GERRAHRVAGPTMPPAQAP--VP 360
R +R+G SP+V RLS SRS +P+ P R P A AP +P
Sbjct: 1574 RQRSRSGSSPEVDSKSRLSPRRSRSGSSPEVKDKPRAAPRAQSGSDSSPEPKAPAPRALP 1633
Query: 359 RACADEWPKFGRAP-PASALSIWHTPDHAQHASIDRQPTGRVSVPESRT 216
R GR P P + S +P+H + R+ G S PE +T
Sbjct: 1634 RRSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARR--GSRSSPEPKT 1680
Score = 31.5 bits (68), Expect = 4.3
Identities = 56/219 (25%), Positives = 73/219 (33%), Gaps = 9/219 (4%)
Frame = -3
Query: 762 HPRFXXEEPKRDPIXXXXXXXXXXAMTKSQNPTMASHELRSXTIRVTIALKERSCPNTAT 583
H E PK P +K+++ A + +S + + + P TA
Sbjct: 433 HASSSPESPKPAPAPGSHREISSSPTSKNRSHGRAKRD-KSHSHTPSRRMGRSRSPATAK 491
Query: 582 RFR---RGCSHRGHASSAC--WASSFGCPHWWQPGCGSLPQTLHRYL-PKHP--CPERTW 427
R R R + RGH+ S W S W G PQ R P+ P R
Sbjct: 492 RGRSRSRTPTKRGHSRSRSPQWRRSRSAQRW---GRSRSPQRRGRSRSPQRPGWSRSRNT 548
Query: 426 VRRKESSPCRRS-DHASSTGTSASSVR*RVAEVRPSSSSKRSLHLAYARPRAARLHRSTT 250
RR S RR H+ S T S A S S + + +R R RS T
Sbjct: 549 QRRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRT 608
Query: 249 DGPGVRSRVEDCVLRRYVAAKISASRSLGKDPARAQATS 133
RSR RR RS + PAR S
Sbjct: 609 PARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRS 647
>AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein.
Length = 1791
Score = 33.5 bits (73), Expect = 1.1
Identities = 34/109 (31%), Positives = 46/109 (42%), Gaps = 6/109 (5%)
Frame = -1
Query: 524 RSGARTGGSPDVAPFRRLSTDTSRSIHAPK---GPG*GERRAHRVAGPTMPPAQAP--VP 360
R +R+G SP+V RLS SRS +P+ P R P A AP +P
Sbjct: 606 RQRSRSGSSPEVDSKSRLSPRRSRSGSSPEVKDKPRAAPRAQSGSDSSPEPKAPAPRALP 665
Query: 359 RACADEWPKFGRAP-PASALSIWHTPDHAQHASIDRQPTGRVSVPESRT 216
R GR P P + S +P+H + R+ G S PE +T
Sbjct: 666 RRSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARR--GSRSSPEPKT 712
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein protein.
Length = 2752
Score = 33.5 bits (73), Expect = 1.1
Identities = 34/109 (31%), Positives = 46/109 (42%), Gaps = 6/109 (5%)
Frame = -1
Query: 524 RSGARTGGSPDVAPFRRLSTDTSRSIHAPK---GPG*GERRAHRVAGPTMPPAQAP--VP 360
R +R+G SP+V RLS SRS +P+ P R P A AP +P
Sbjct: 1574 RQRSRSGSSPEVDSKSRLSPRRSRSGSSPEVKDKPRAAPRAQSGSDSSPEPKAPAPRALP 1633
Query: 359 RACADEWPKFGRAP-PASALSIWHTPDHAQHASIDRQPTGRVSVPESRT 216
R GR P P + S +P+H + R+ G S PE +T
Sbjct: 1634 RRSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARR--GSRSSPEPKT 1680
Score = 31.5 bits (68), Expect = 4.3
Identities = 56/219 (25%), Positives = 73/219 (33%), Gaps = 9/219 (4%)
Frame = -3
Query: 762 HPRFXXEEPKRDPIXXXXXXXXXXAMTKSQNPTMASHELRSXTIRVTIALKERSCPNTAT 583
H E PK P +K+++ A + +S + + + P TA
Sbjct: 433 HASSSPESPKPAPAPGSHREISSSPTSKNRSHGRAKRD-KSHSHTPSRRMGRSRSPATAK 491
Query: 582 RFR---RGCSHRGHASSAC--WASSFGCPHWWQPGCGSLPQTLHRYL-PKHP--CPERTW 427
R R R + RGH+ S W S W G PQ R P+ P R
Sbjct: 492 RGRSRSRTPTKRGHSRSRSPQWRRSRSAQRW---GRSRSPQRRGRSRSPQRPGWSRSRNT 548
Query: 426 VRRKESSPCRRS-DHASSTGTSASSVR*RVAEVRPSSSSKRSLHLAYARPRAARLHRSTT 250
RR S RR H+ S T S A S S + + +R R RS T
Sbjct: 549 QRRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRT 608
Query: 249 DGPGVRSRVEDCVLRRYVAAKISASRSLGKDPARAQATS 133
RSR RR RS + PAR S
Sbjct: 609 PARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRS 647
>AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein
protein.
Length = 1275
Score = 33.5 bits (73), Expect = 1.1
Identities = 34/109 (31%), Positives = 46/109 (42%), Gaps = 6/109 (5%)
Frame = -1
Query: 524 RSGARTGGSPDVAPFRRLSTDTSRSIHAPK---GPG*GERRAHRVAGPTMPPAQAP--VP 360
R +R+G SP+V RLS SRS +P+ P R P A AP +P
Sbjct: 97 RQRSRSGSSPEVDSKSRLSPRRSRSGSSPEVKDKPRAAPRAQSGSDSSPEPKAPAPRALP 156
Query: 359 RACADEWPKFGRAP-PASALSIWHTPDHAQHASIDRQPTGRVSVPESRT 216
R GR P P + S +P+H + R+ G S PE +T
Sbjct: 157 RRSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARR--GSRSSPEPKT 203
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 33.5 bits (73), Expect = 1.1
Identities = 34/109 (31%), Positives = 46/109 (42%), Gaps = 6/109 (5%)
Frame = -1
Query: 524 RSGARTGGSPDVAPFRRLSTDTSRSIHAPK---GPG*GERRAHRVAGPTMPPAQAP--VP 360
R +R+G SP+V RLS SRS +P+ P R P A AP +P
Sbjct: 1622 RQRSRSGSSPEVDSKSRLSPRRSRSGSSPEVKDKPRAAPRAQSGSDSSPEPKAPAPRALP 1681
Query: 359 RACADEWPKFGRAP-PASALSIWHTPDHAQHASIDRQPTGRVSVPESRT 216
R GR P P + S +P+H + R+ G S PE +T
Sbjct: 1682 RRSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARR--GSRSSPEPKT 1728
Score = 31.5 bits (68), Expect = 4.3
Identities = 56/219 (25%), Positives = 73/219 (33%), Gaps = 9/219 (4%)
Frame = -3
Query: 762 HPRFXXEEPKRDPIXXXXXXXXXXAMTKSQNPTMASHELRSXTIRVTIALKERSCPNTAT 583
H E PK P +K+++ A + +S + + + P TA
Sbjct: 481 HASSSPESPKPAPAPGSHREISSSPTSKNRSHGRAKRD-KSHSHTPSRRMGRSRSPATAK 539
Query: 582 RFR---RGCSHRGHASSAC--WASSFGCPHWWQPGCGSLPQTLHRYL-PKHP--CPERTW 427
R R R + RGH+ S W S W G PQ R P+ P R
Sbjct: 540 RGRSRSRTPTKRGHSRSRSPQWRRSRSAQRW---GRSRSPQRRGRSRSPQRPGWSRSRNT 596
Query: 426 VRRKESSPCRRS-DHASSTGTSASSVR*RVAEVRPSSSSKRSLHLAYARPRAARLHRSTT 250
RR S RR H+ S T S A S S + + +R R RS T
Sbjct: 597 QRRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRT 656
Query: 249 DGPGVRSRVEDCVLRRYVAAKISASRSLGKDPARAQATS 133
RSR RR RS + PAR S
Sbjct: 657 PARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRS 695
>BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein.
Length = 1022
Score = 31.5 bits (68), Expect = 4.3
Identities = 56/219 (25%), Positives = 73/219 (33%), Gaps = 9/219 (4%)
Frame = -3
Query: 762 HPRFXXEEPKRDPIXXXXXXXXXXAMTKSQNPTMASHELRSXTIRVTIALKERSCPNTAT 583
H E PK P +K+++ A + +S + + + P TA
Sbjct: 433 HASSSPESPKPAPAPGSHREISSSPTSKNRSHGRAKRD-KSHSHTPSRRMGRSRSPATAK 491
Query: 582 RFR---RGCSHRGHASSAC--WASSFGCPHWWQPGCGSLPQTLHRYL-PKHP--CPERTW 427
R R R + RGH+ S W S W G PQ R P+ P R
Sbjct: 492 RGRSRSRTPTKRGHSRSRSPQWRRSRSAQRW---GRSRSPQRRGRSRSPQRPGWSRSRNT 548
Query: 426 VRRKESSPCRRS-DHASSTGTSASSVR*RVAEVRPSSSSKRSLHLAYARPRAARLHRSTT 250
RR S RR H+ S T S A S S + + +R R RS T
Sbjct: 549 QRRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRT 608
Query: 249 DGPGVRSRVEDCVLRRYVAAKISASRSLGKDPARAQATS 133
RSR RR RS + PAR S
Sbjct: 609 PARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRS 647
>AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein protein.
Length = 956
Score = 31.5 bits (68), Expect = 4.3
Identities = 56/219 (25%), Positives = 73/219 (33%), Gaps = 9/219 (4%)
Frame = -3
Query: 762 HPRFXXEEPKRDPIXXXXXXXXXXAMTKSQNPTMASHELRSXTIRVTIALKERSCPNTAT 583
H E PK P +K+++ A + +S + + + P TA
Sbjct: 398 HASSSPESPKPAPAPGSHREISSSPTSKNRSHGRAKRD-KSHSHTPSRRMGRSRSPATAK 456
Query: 582 RFR---RGCSHRGHASSAC--WASSFGCPHWWQPGCGSLPQTLHRYL-PKHP--CPERTW 427
R R R + RGH+ S W S W G PQ R P+ P R
Sbjct: 457 RGRSRSRTPTKRGHSRSRSPQWRRSRSAQRW---GRSRSPQRRGRSRSPQRPGWSRSRNT 513
Query: 426 VRRKESSPCRRS-DHASSTGTSASSVR*RVAEVRPSSSSKRSLHLAYARPRAARLHRSTT 250
RR S RR H+ S T S A S S + + +R R RS T
Sbjct: 514 QRRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRT 573
Query: 249 DGPGVRSRVEDCVLRRYVAAKISASRSLGKDPARAQATS 133
RSR RR RS + PAR S
Sbjct: 574 PARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRS 612
>AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein
protein.
Length = 1262
Score = 31.5 bits (68), Expect = 4.3
Identities = 56/219 (25%), Positives = 73/219 (33%), Gaps = 9/219 (4%)
Frame = -3
Query: 762 HPRFXXEEPKRDPIXXXXXXXXXXAMTKSQNPTMASHELRSXTIRVTIALKERSCPNTAT 583
H E PK P +K+++ A + +S + + + P TA
Sbjct: 223 HASSSPESPKPAPAPGSHREISSSPTSKNRSHGRAKRD-KSHSHTPSRRMGRSRSPATAK 281
Query: 582 RFR---RGCSHRGHASSAC--WASSFGCPHWWQPGCGSLPQTLHRYL-PKHP--CPERTW 427
R R R + RGH+ S W S W G PQ R P+ P R
Sbjct: 282 RGRSRSRTPTKRGHSRSRSPQWRRSRSAQRW---GRSRSPQRRGRSRSPQRPGWSRSRNT 338
Query: 426 VRRKESSPCRRS-DHASSTGTSASSVR*RVAEVRPSSSSKRSLHLAYARPRAARLHRSTT 250
RR S RR H+ S T S A S S + + +R R RS T
Sbjct: 339 QRRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRT 398
Query: 249 DGPGVRSRVEDCVLRRYVAAKISASRSLGKDPARAQATS 133
RSR RR RS + PAR S
Sbjct: 399 PARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRS 437
>U57592-1|AAC50822.1| 1266|Homo sapiens jumonji putative protein
protein.
Length = 1266
Score = 31.1 bits (67), Expect = 5.7
Identities = 20/68 (29%), Positives = 28/68 (41%)
Frame = -1
Query: 542 ARAGRHRSGARTGGSPDVAPFRRLSTDTSRSIHAPKGPG*GERRAHRVAGPTMPPAQAPV 363
A AG+ G + G D A ST S+H P+ G E+ + M + PV
Sbjct: 502 ATAGKSTPGRQAHGKADSASCENRSTSQPESVHKPQDSGKAEKGGGKAGWAAMD--EIPV 559
Query: 362 PRACADEW 339
R A E+
Sbjct: 560 LRPSAKEF 567
>BC098448-1|AAH98448.1| 410|Homo sapiens membrane-associated ring
finger (C3HC4) 4 protein.
Length = 410
Score = 31.1 bits (67), Expect = 5.7
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = -1
Query: 392 PTMPPAQAPVPRACADEWPKFGRAPPASALSIWHTPDHAQHASIDRQPTG 243
P +PP P + D+W PPAS LS + D + + DR G
Sbjct: 102 PPVPPPPPLPPSSVEDDWGGPATEPPASLLSSASSDDFCKEKTEDRYSLG 151
>BC080554-1|AAH80554.1| 659|Homo sapiens splicing factor,
arginine/serine-rich 16 protein.
Length = 659
Score = 31.1 bits (67), Expect = 5.7
Identities = 21/64 (32%), Positives = 29/64 (45%)
Frame = -1
Query: 539 RAGRHRSGARTGGSPDVAPFRRLSTDTSRSIHAPKGPG*GERRAHRVAGPTMPPAQAPVP 360
R RH S +R+ S ++P R S SRS H+P R R P+ PA+ +
Sbjct: 469 RGLRHHSSSRSRSSWSLSPSRSRSLTRSRS-HSPSPSQSRSRSRSRSQSPSPSPAREKLT 527
Query: 359 RACA 348
R A
Sbjct: 528 RPAA 531
>BC048793-1|AAH48793.1| 357|Homo sapiens MARCH4 protein protein.
Length = 357
Score = 31.1 bits (67), Expect = 5.7
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = -1
Query: 392 PTMPPAQAPVPRACADEWPKFGRAPPASALSIWHTPDHAQHASIDRQPTG 243
P +PP P + D+W PPAS LS + D + + DR G
Sbjct: 49 PPVPPPPPLPPSSVEDDWGGPATEPPASLLSSASSDDFCKEKTEDRYSLG 98
>BC046246-1|AAH46246.1| 1246|Homo sapiens jumonji, AT rich
interactive domain 2 protein.
Length = 1246
Score = 31.1 bits (67), Expect = 5.7
Identities = 20/68 (29%), Positives = 28/68 (41%)
Frame = -1
Query: 542 ARAGRHRSGARTGGSPDVAPFRRLSTDTSRSIHAPKGPG*GERRAHRVAGPTMPPAQAPV 363
A AG+ G + G D A ST S+H P+ G E+ + M + PV
Sbjct: 502 ATAGKSTPGRQAHGKADSASCENRSTSQPESVHKPQDSGKAEKGGGKAGWAAMD--EIPV 559
Query: 362 PRACADEW 339
R A E+
Sbjct: 560 LRPSAKEF 567
>AY358944-1|AAQ89303.1| 594|Homo sapiens SWAP2 protein.
Length = 594
Score = 31.1 bits (67), Expect = 5.7
Identities = 21/64 (32%), Positives = 29/64 (45%)
Frame = -1
Query: 539 RAGRHRSGARTGGSPDVAPFRRLSTDTSRSIHAPKGPG*GERRAHRVAGPTMPPAQAPVP 360
R RH S +R+ S ++P R S SRS H+P R R P+ PA+ +
Sbjct: 484 RGLRHHSSSRSRSSWSLSPSRSRSLTRSRS-HSPSPSQSRSRSRSRSQSPSPSPAREKLT 542
Query: 359 RACA 348
R A
Sbjct: 543 RPAA 546
>AL136162-1|CAI15719.1| 1246|Homo sapiens jumonji, AT rich
interactive domain 2 protein.
Length = 1246
Score = 31.1 bits (67), Expect = 5.7
Identities = 20/68 (29%), Positives = 28/68 (41%)
Frame = -1
Query: 542 ARAGRHRSGARTGGSPDVAPFRRLSTDTSRSIHAPKGPG*GERRAHRVAGPTMPPAQAPV 363
A AG+ G + G D A ST S+H P+ G E+ + M + PV
Sbjct: 502 ATAGKSTPGRQAHGKADSASCENRSTSQPESVHKPQDSGKAEKGGGKAGWAAMD--EIPV 559
Query: 362 PRACADEW 339
R A E+
Sbjct: 560 LRPSAKEF 567
>AL021938-1|CAI19873.1| 1246|Homo sapiens jumonji, AT rich
interactive domain 2 protein.
Length = 1246
Score = 31.1 bits (67), Expect = 5.7
Identities = 20/68 (29%), Positives = 28/68 (41%)
Frame = -1
Query: 542 ARAGRHRSGARTGGSPDVAPFRRLSTDTSRSIHAPKGPG*GERRAHRVAGPTMPPAQAPV 363
A AG+ G + G D A ST S+H P+ G E+ + M + PV
Sbjct: 502 ATAGKSTPGRQAHGKADSASCENRSTSQPESVHKPQDSGKAEKGGGKAGWAAMD--EIPV 559
Query: 362 PRACADEW 339
R A E+
Sbjct: 560 LRPSAKEF 567
>AK122706-1|BAC85504.1| 814|Homo sapiens ISOFORM. protein.
Length = 814
Score = 31.1 bits (67), Expect = 5.7
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = -2
Query: 238 CPFPSRGLCSPSVCRGQDFGLEVPR*GSGEGTG 140
CPFP+RG C P C G+ G+ R G E G
Sbjct: 765 CPFPARGDCCPD-CDGEGHGIGSCRGGMRETRG 796
>AF042810-1|AAC82340.1| 659|Homo sapiens suppressor of
white-apricot homolog 2 protein.
Length = 659
Score = 31.1 bits (67), Expect = 5.7
Identities = 21/64 (32%), Positives = 29/64 (45%)
Frame = -1
Query: 539 RAGRHRSGARTGGSPDVAPFRRLSTDTSRSIHAPKGPG*GERRAHRVAGPTMPPAQAPVP 360
R RH S +R+ S ++P R S SRS H+P R R P+ PA+ +
Sbjct: 469 RGLRHHSSSRSRSSWSLSPSRSRSLTRSRS-HSPSPSQSRSRSRSRSQSPSPSPAREKLT 527
Query: 359 RACA 348
R A
Sbjct: 528 RPAA 531
>AF042800-1|AAC82339.1| 659|Homo sapiens suppressor of white
apricot homolog 2 protein.
Length = 659
Score = 31.1 bits (67), Expect = 5.7
Identities = 21/64 (32%), Positives = 29/64 (45%)
Frame = -1
Query: 539 RAGRHRSGARTGGSPDVAPFRRLSTDTSRSIHAPKGPG*GERRAHRVAGPTMPPAQAPVP 360
R RH S +R+ S ++P R S SRS H+P R R P+ PA+ +
Sbjct: 469 RGLRHHSSSRSRSSWSLSPSRSRSLTRSRS-HSPSPSQSRSRSRSRSQSPSPSPAREKLT 527
Query: 359 RACA 348
R A
Sbjct: 528 RPAA 531
>AB037820-1|BAA92637.1| 452|Homo sapiens KIAA1399 protein protein.
Length = 452
Score = 31.1 bits (67), Expect = 5.7
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = -1
Query: 392 PTMPPAQAPVPRACADEWPKFGRAPPASALSIWHTPDHAQHASIDRQPTG 243
P +PP P + D+W PPAS LS + D + + DR G
Sbjct: 144 PPVPPPPPLPPSSVEDDWGGPATEPPASLLSSASSDDFCKEKTEDRYSLG 193
>U19345-1|AAC36392.1| 935|Homo sapiens AR1 protein.
Length = 935
Score = 30.7 bits (66), Expect = 7.6
Identities = 28/85 (32%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = -3
Query: 480 PQTLHRYLPKHPCPER-TWVRRKESSPCRRSDHASSTGTSASSVR*RVAEVRPSSSSKRS 304
PQ LPK+P P+R T ++ K + + + S T T E + +RS
Sbjct: 644 PQDYAATLPKNPPPKRATEMQSKVKVRHKSASNGSKTDTEEEE------EQQQQQKEQRS 697
Query: 303 LHLAYARPRAARLHRSTTDGPGVRS 229
L A PR R HRS G G RS
Sbjct: 698 LA---AHPRFKRRHRSEDCGGGPRS 719
>M95667-1|AAC37531.1| 165|Homo sapiens c-erb B2/neu protein
protein.
Length = 165
Score = 30.7 bits (66), Expect = 7.6
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = -3
Query: 336 EVRPSSSSKRSLHLAYARPRAARLHRSTTDGPGVRSRVED 217
+VRP S R L ARP A L R+ T PG V+D
Sbjct: 64 DVRPQPPSPREGPLPAARPAGATLERAKTLSPGKNGVVKD 103
>M11730-1|AAA75493.1| 1255|Homo sapiens protein ( Human tyrosine
kinase-type receptor (HER2) mRNA, complete cds. ).
Length = 1255
Score = 30.7 bits (66), Expect = 7.6
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = -3
Query: 336 EVRPSSSSKRSLHLAYARPRAARLHRSTTDGPGVRSRVED 217
+VRP S R L ARP A L R+ T PG V+D
Sbjct: 1144 DVRPQPPSPREGPLPAARPAGATLERAKTLSPGKNGVVKD 1183
>BX247885-5|CAI95721.1| 1960|Homo sapiens protein ( Human DNA sequence
from clone RP4-669P10 on chromosome 22q13.31-13.33. ).
Length = 1960
Score = 30.7 bits (66), Expect = 7.6
Identities = 28/85 (32%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = -3
Query: 480 PQTLHRYLPKHPCPER-TWVRRKESSPCRRSDHASSTGTSASSVR*RVAEVRPSSSSKRS 304
PQ LPK+P P+R T ++ K + + + S T T E + +RS
Sbjct: 1726 PQDYAATLPKNPPPKRATEMQSKVKVRHKSASNGSKTDTEEEE------EQQQQQKEQRS 1779
Query: 303 LHLAYARPRAARLHRSTTDGPGVRS 229
L A PR R HRS G G RS
Sbjct: 1780 LA---AHPRFKRRHRSEDCGGGPRS 1801
>AY208911-1|AAO18082.1| 1255|Homo sapiens v-erb-b2 erythroblastic
leukemia viral oncogene homolog 2, neuro/glioblastoma d
protein.
Length = 1255
Score = 30.7 bits (66), Expect = 7.6
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = -3
Query: 336 EVRPSSSSKRSLHLAYARPRAARLHRSTTDGPGVRSRVED 217
+VRP S R L ARP A L R+ T PG V+D
Sbjct: 1144 DVRPQPPSPREGPLPAARPAGATLERAKTLSPGKNGVVKD 1183
>AY065978-1|AAL40897.1| 544|Homo sapiens extracellular
signal-regulated kinase 8 protein.
Length = 544
Score = 30.7 bits (66), Expect = 7.6
Identities = 22/81 (27%), Positives = 29/81 (35%)
Frame = -3
Query: 468 HRYLPKHPCPERTWVRRKESSPCRRSDHASSTGTSASSVR*RVAEVRPSSSSKRSLHLAY 289
H Y+ + CP W R + P S S V + E SS + R
Sbjct: 301 HPYVQRFHCPSDEWAREADVRPRAHEGVQLSVPEYRSRVYQMILECGGSSGTSREKGPEG 360
Query: 288 ARPRAARLHRSTTDGPGVRSR 226
P A LH+ D P + SR
Sbjct: 361 VSPSQAHLHKPRAD-PQLPSR 380
>AL031346-1|CAB42440.1| 1641|Homo sapiens dJ597B2.1 (transcription
factor 20 (AR1, KIAA0292)) protein.
Length = 1641
Score = 30.7 bits (66), Expect = 7.6
Identities = 28/85 (32%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = -3
Query: 480 PQTLHRYLPKHPCPER-TWVRRKESSPCRRSDHASSTGTSASSVR*RVAEVRPSSSSKRS 304
PQ LPK+P P+R T ++ K + + + S T T E + +RS
Sbjct: 1482 PQDYAATLPKNPPPKRATEMQSKVKVRHKSASNGSKTDTEEEE------EQQQQQKEQRS 1535
Query: 303 LHLAYARPRAARLHRSTTDGPGVRS 229
L A PR R HRS G G RS
Sbjct: 1536 LA---AHPRFKRRHRSEDCGGGPRS 1557
>AK128129-1|BAC87287.1| 467|Homo sapiens . protein.
Length = 467
Score = 30.7 bits (66), Expect = 7.6
Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Frame = +3
Query: 171 TSRPKSWP-RHTDGEHSPRLGNGHPARRLSIDGGVLRVVWRMPNGESA-CWRSSAELRPL 344
T P SWP R++DG S L R + + R SA CW A L P+
Sbjct: 60 TGGPLSWPWRYSDGYRSSSLLRAVAHLRSQLWAHLPRAPLAPRWSPSAWCWVGGALLGPM 119
Query: 345 VSARSRHWCL 374
V ++ H CL
Sbjct: 120 VLSKHPHLCL 129
>AK074727-1|BAC11165.1| 653|Homo sapiens protein ( Homo sapiens
cDNA FLJ90246 fis, clone NT2RM2001818, weakly similar to
SIALIDASE (EC 3.2.1.18). ).
Length = 653
Score = 30.7 bits (66), Expect = 7.6
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = -2
Query: 682 QVTEPNHGXPRTPVXYHTGDDSPQGEVLPQHRDEVSPRVLPPWARF*RVLG 530
Q P HG TP + T D P+ P+H + +P ++ W R R +G
Sbjct: 388 QACTPTHGPSSTPSPFQT-DGVPRTPS-PKHSGKTTPDIIKDWPRRKRAVG 436
>AK024427-1|BAB15717.1| 349|Homo sapiens FLJ00016 protein protein.
Length = 349
Score = 30.7 bits (66), Expect = 7.6
Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Frame = -2
Query: 514 PALVAARMWLPSADSPQIP-PEASMPRKDLGEAKGELTVSPVRPCLQHRHQCLERALTSG 338
PA + +W Q P P S+ LG KGEL+V + P H+ +A G
Sbjct: 68 PAPASQVVWRKPQSLNQYPCPTPSLFLASLGSGKGELSVPSLAPLCLHQPGGWAQACGGG 127
Query: 337 RSSAELLQQALS 302
+ L ALS
Sbjct: 128 EVATHLAVPALS 139
>AB006630-1|BAA22961.1| 1716|Homo sapiens KIAA0292 protein.
Length = 1716
Score = 30.7 bits (66), Expect = 7.6
Identities = 28/85 (32%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = -3
Query: 480 PQTLHRYLPKHPCPER-TWVRRKESSPCRRSDHASSTGTSASSVR*RVAEVRPSSSSKRS 304
PQ LPK+P P+R T ++ K + + + S T T E + +RS
Sbjct: 1482 PQDYAATLPKNPPPKRATEMQSKVKVRHKSASNGSKTDTEEEE------EQQQQQKEQRS 1535
Query: 303 LHLAYARPRAARLHRSTTDGPGVRS 229
L A PR R HRS G G RS
Sbjct: 1536 LA---AHPRFKRRHRSEDCGGGPRS 1557
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,624,841
Number of Sequences: 237096
Number of extensions: 3996591
Number of successful extensions: 15791
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 12951
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15735
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11714809042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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