Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_FL5_O13
(873 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL359706-1|CAI12865.1| 495|Homo sapiens nuclear fragile X menta... 37 0.083
AL354816-1|CAC40689.2| 495|Homo sapiens nuclear fragile X menta... 37 0.083
AF159548-1|AAF15315.1| 495|Homo sapiens nuclear FMRP interactin... 36 0.25
AK127507-1|BAC87013.1| 130|Homo sapiens protein ( Homo sapiens ... 34 0.58
U73825-1|AAB95090.1| 465|Homo sapiens Smad5 protein. 32 3.1
L21990-1|AAA60301.1| 464|Homo sapiens spiceosomal protein protein. 32 3.1
CR457424-1|CAG33705.1| 465|Homo sapiens MADH5 protein. 32 3.1
BC015804-1|AAH15804.1| 481|Homo sapiens SF3A2 protein protein. 32 3.1
BC009903-1|AAH09903.1| 464|Homo sapiens splicing factor 3a, sub... 32 3.1
BC009682-1|AAH09682.1| 465|Homo sapiens SMAD family member 5 pr... 32 3.1
BC004434-1|AAH04434.1| 464|Homo sapiens splicing factor 3a, sub... 32 3.1
AF010601-1|AAB66353.1| 465|Homo sapiens SMAD5 protein. 32 3.1
AF009744-1|AAB82655.1| 462|Homo sapiens Mad homolog protein. 32 3.1
AF009678-1|AAB72180.1| 465|Homo sapiens Smad5 protein. 32 3.1
AC005263-1|AAC25613.1| 464|Homo sapiens SP62_HUMAN protein. 32 3.1
X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein. 31 4.1
X80199-1|CAC27699.1| 703|Homo sapiens MLN51 protein. 31 4.1
S81243-1|AAB36006.1| 684|Homo sapiens CHN protein. 31 4.1
D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan rec... 31 4.1
BC050526-1|AAH50526.1| 703|Homo sapiens cancer susceptibility c... 31 4.1
BC044656-1|AAH44656.1| 703|Homo sapiens cancer susceptibility c... 31 4.1
AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfam... 31 4.1
AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfam... 31 4.1
AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfam... 31 4.1
AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfam... 31 4.1
AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfam... 31 4.1
>AL359706-1|CAI12865.1| 495|Homo sapiens nuclear fragile X mental
retardation protein interacting protein 1 protein.
Length = 495
Score = 37.1 bits (82), Expect = 0.083
Identities = 24/77 (31%), Positives = 34/77 (44%)
Frame = +2
Query: 494 SYYYWRSRPYASSHPPLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKP 673
S+ +W P PPL S L + P S QPP P P P+ + PG +P
Sbjct: 36 SWMFWAMLP--PPPPPLTSSLPAAGSK-PSSESQPPMEAQSLPGAP-PPFDAQILPGAQP 91
Query: 674 PLSSEAPSSVSHPLVTG 724
P +++P S P +G
Sbjct: 92 PFDAQSPLD-SQPQPSG 107
>AL354816-1|CAC40689.2| 495|Homo sapiens nuclear fragile X mental
retardation protein interacting protein 1 protein.
Length = 495
Score = 37.1 bits (82), Expect = 0.083
Identities = 24/77 (31%), Positives = 34/77 (44%)
Frame = +2
Query: 494 SYYYWRSRPYASSHPPLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKP 673
S+ +W P PPL S L + P S QPP P P P+ + PG +P
Sbjct: 36 SWMFWAMLP--PPPPPLTSSLPAAGSK-PSSESQPPMEAQSLPGAP-PPFDAQILPGAQP 91
Query: 674 PLSSEAPSSVSHPLVTG 724
P +++P S P +G
Sbjct: 92 PFDAQSPLD-SQPQPSG 107
>AF159548-1|AAF15315.1| 495|Homo sapiens nuclear FMRP interacting
protein 1 protein.
Length = 495
Score = 35.5 bits (78), Expect = 0.25
Identities = 23/76 (30%), Positives = 33/76 (43%)
Frame = +2
Query: 497 YYYWRSRPYASSHPPLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKPP 676
+ +W P PPL S L + P S QPP P P P+ + PG +PP
Sbjct: 37 WMFWAMLP--PPPPPLTSSLPAAGSK-PSSESQPPMEAQSLPGAP-PPFDAQILPGAQPP 92
Query: 677 LSSEAPSSVSHPLVTG 724
+++P S P +G
Sbjct: 93 FDAQSPLD-SQPQPSG 107
>AK127507-1|BAC87013.1| 130|Homo sapiens protein ( Homo sapiens
cDNA FLJ45600 fis, clone BRTHA3020369. ).
Length = 130
Score = 34.3 bits (75), Expect = 0.58
Identities = 19/47 (40%), Positives = 24/47 (51%)
Frame = +2
Query: 464 SQCAGHPFILSYYYWRSRPYASSHPPLRSRLHQPDHQIPDSIHQPPQ 604
S C G PF SY S P++S HP + +H Q P + QPPQ
Sbjct: 85 SNCIG-PFS-SYLTSVSLPHSSIHPSIHPSIHPSFIQTPSGLSQPPQ 129
>U73825-1|AAB95090.1| 465|Homo sapiens Smad5 protein.
Length = 465
Score = 31.9 bits (69), Expect = 3.1
Identities = 23/58 (39%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Frame = +2
Query: 557 HQPDHQ-IPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKP--PLSSEAPSSVSHPLVT 721
H P + PDS HQP T PFP P +PY A P P SS S P T
Sbjct: 166 HMPQNATFPDSFHQPNNT--PFPLSPNSPYPPSPASSTYPNSPASSGPGSPFQLPADT 221
>L21990-1|AAA60301.1| 464|Homo sapiens spiceosomal protein protein.
Length = 464
Score = 31.9 bits (69), Expect = 3.1
Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 4/67 (5%)
Frame = +2
Query: 536 PPLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*T---PYXKEFAPGLKPPLSS-EAPSSV 703
PPL + L P +P+S+ PP P P +P T P P L PP P+ V
Sbjct: 235 PPLMNGL-PPRPPLPESLPPPPPGGLPLPPMPPTGPAPSGPPGPPQLPPPAPGVHPPAPV 293
Query: 704 SHPLVTG 724
HP +G
Sbjct: 294 VHPPASG 300
Score = 30.3 bits (65), Expect = 9.5
Identities = 23/69 (33%), Positives = 28/69 (40%), Gaps = 4/69 (5%)
Frame = +2
Query: 518 PYASSHPPLRSRLHQPD--HQIPDSIHQPPQT*HPF-PSI-P*TPYXKEFAPGLKPPLSS 685
P HP QP H +H P HP P + P TP P L+PPL S
Sbjct: 396 PAPGMHPQAPGVHPQPPGVHPSAPGVHPQPPGVHPSNPGVHPPTP----MPPMLRPPLPS 451
Query: 686 EAPSSVSHP 712
E P ++ P
Sbjct: 452 EGPGNIPPP 460
>CR457424-1|CAG33705.1| 465|Homo sapiens MADH5 protein.
Length = 465
Score = 31.9 bits (69), Expect = 3.1
Identities = 23/58 (39%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Frame = +2
Query: 557 HQPDHQ-IPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKP--PLSSEAPSSVSHPLVT 721
H P + PDS HQP T PFP P +PY A P P SS S P T
Sbjct: 166 HMPQNATFPDSFHQPNNT--PFPLSPNSPYPPSPASSAYPNSPASSGPGSPFQLPADT 221
>BC015804-1|AAH15804.1| 481|Homo sapiens SF3A2 protein protein.
Length = 481
Score = 31.9 bits (69), Expect = 3.1
Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 4/67 (5%)
Frame = +2
Query: 536 PPLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*T---PYXKEFAPGLKPPLSS-EAPSSV 703
PPL + L P +P+S+ PP P P +P T P P L PP P+ V
Sbjct: 235 PPLMNGL-PPRPPLPESLPPPPPGGLPLPPMPPTGPAPSGPPGPPQLPPPAPGVHPPAPV 293
Query: 704 SHPLVTG 724
HP +G
Sbjct: 294 VHPPASG 300
Score = 30.3 bits (65), Expect = 9.5
Identities = 23/69 (33%), Positives = 28/69 (40%), Gaps = 4/69 (5%)
Frame = +2
Query: 518 PYASSHPPLRSRLHQPD--HQIPDSIHQPPQT*HPF-PSI-P*TPYXKEFAPGLKPPLSS 685
P HP QP H +H P HP P + P TP P L+PPL S
Sbjct: 396 PAPGMHPQAPGVHPQPPGVHPSAPGVHPQPPGVHPSNPGVHPPTP----MPPMLRPPLPS 451
Query: 686 EAPSSVSHP 712
E P ++ P
Sbjct: 452 EGPGNIPPP 460
>BC009903-1|AAH09903.1| 464|Homo sapiens splicing factor 3a,
subunit 2, 66kDa protein.
Length = 464
Score = 31.9 bits (69), Expect = 3.1
Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 4/67 (5%)
Frame = +2
Query: 536 PPLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*T---PYXKEFAPGLKPPLSS-EAPSSV 703
PPL + L P +P+S+ PP P P +P T P P L PP P+ V
Sbjct: 235 PPLMNGL-PPRPPLPESLPPPPPGGLPLPPMPPTGPAPSGPPGPPQLPPPAPGVHPPAPV 293
Query: 704 SHPLVTG 724
HP +G
Sbjct: 294 VHPPASG 300
Score = 30.3 bits (65), Expect = 9.5
Identities = 23/69 (33%), Positives = 28/69 (40%), Gaps = 4/69 (5%)
Frame = +2
Query: 518 PYASSHPPLRSRLHQPD--HQIPDSIHQPPQT*HPF-PSI-P*TPYXKEFAPGLKPPLSS 685
P HP QP H +H P HP P + P TP P L+PPL S
Sbjct: 396 PAPGMHPQAPGVHPQPPGVHPSAPGVHPQPPGVHPSNPGVHPPTP----MPPMLRPPLPS 451
Query: 686 EAPSSVSHP 712
E P ++ P
Sbjct: 452 EGPGNIPPP 460
>BC009682-1|AAH09682.1| 465|Homo sapiens SMAD family member 5
protein.
Length = 465
Score = 31.9 bits (69), Expect = 3.1
Identities = 23/58 (39%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Frame = +2
Query: 557 HQPDHQ-IPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKP--PLSSEAPSSVSHPLVT 721
H P + PDS HQP T PFP P +PY A P P SS S P T
Sbjct: 166 HMPQNATFPDSFHQPNNT--PFPLSPNSPYPPSPASSTYPNSPASSGPGSPFQLPADT 221
>BC004434-1|AAH04434.1| 464|Homo sapiens splicing factor 3a,
subunit 2, 66kDa protein.
Length = 464
Score = 31.9 bits (69), Expect = 3.1
Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 4/67 (5%)
Frame = +2
Query: 536 PPLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*T---PYXKEFAPGLKPPLSS-EAPSSV 703
PPL + L P +P+S+ PP P P +P T P P L PP P+ V
Sbjct: 235 PPLMNGL-PPRPPLPESLPPPPPGGLPLPPMPPTGPAPSGPPGPPQLPPPAPGVHPPAPV 293
Query: 704 SHPLVTG 724
HP +G
Sbjct: 294 VHPPASG 300
Score = 30.3 bits (65), Expect = 9.5
Identities = 23/69 (33%), Positives = 28/69 (40%), Gaps = 4/69 (5%)
Frame = +2
Query: 518 PYASSHPPLRSRLHQPD--HQIPDSIHQPPQT*HPF-PSI-P*TPYXKEFAPGLKPPLSS 685
P HP QP H +H P HP P + P TP P L+PPL S
Sbjct: 396 PAPGMHPQAPGVHPQPPGVHPSAPGVHPQPPGVHPSNPGVHPPTP----MPPMLRPPLPS 451
Query: 686 EAPSSVSHP 712
E P ++ P
Sbjct: 452 EGPGNIPPP 460
>AF010601-1|AAB66353.1| 465|Homo sapiens SMAD5 protein.
Length = 465
Score = 31.9 bits (69), Expect = 3.1
Identities = 23/58 (39%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Frame = +2
Query: 557 HQPDHQ-IPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKP--PLSSEAPSSVSHPLVT 721
H P + PDS HQP T PFP P +PY A P P SS S P T
Sbjct: 166 HMPQNATFPDSFHQPNNT--PFPLSPNSPYPPSPASSTYPNSPASSGPGSPFQLPADT 221
>AF009744-1|AAB82655.1| 462|Homo sapiens Mad homolog protein.
Length = 462
Score = 31.9 bits (69), Expect = 3.1
Identities = 23/58 (39%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Frame = +2
Query: 557 HQPDHQ-IPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKP--PLSSEAPSSVSHPLVT 721
H P + PDS HQP T PFP P +PY A P P SS S P T
Sbjct: 163 HMPQNATFPDSFHQPNNT--PFPLSPNSPYPPSPASSTYPNSPASSGPGSPFQLPADT 218
>AF009678-1|AAB72180.1| 465|Homo sapiens Smad5 protein.
Length = 465
Score = 31.9 bits (69), Expect = 3.1
Identities = 23/58 (39%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Frame = +2
Query: 557 HQPDHQ-IPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKP--PLSSEAPSSVSHPLVT 721
H P + PDS HQP T PFP P +PY A P P SS S P T
Sbjct: 166 HMPQNATFPDSFHQPNNT--PFPLSPNSPYPPSPASSTYPNSPASSGPGSPFQLPADT 221
>AC005263-1|AAC25613.1| 464|Homo sapiens SP62_HUMAN protein.
Length = 464
Score = 31.9 bits (69), Expect = 3.1
Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 4/67 (5%)
Frame = +2
Query: 536 PPLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*T---PYXKEFAPGLKPPLSS-EAPSSV 703
PPL + L P +P+S+ PP P P +P T P P L PP P+ V
Sbjct: 235 PPLMNGL-PPRPPLPESLPPPPPGGLPLPPMPPTGPAPSGPPGPPQLPPPAPGVHPPAPV 293
Query: 704 SHPLVTG 724
HP +G
Sbjct: 294 VHPPASG 300
Score = 30.3 bits (65), Expect = 9.5
Identities = 23/69 (33%), Positives = 28/69 (40%), Gaps = 4/69 (5%)
Frame = +2
Query: 518 PYASSHPPLRSRLHQPD--HQIPDSIHQPPQT*HPF-PSI-P*TPYXKEFAPGLKPPLSS 685
P HP QP H +H P HP P + P TP P L+PPL S
Sbjct: 396 PAPGMHPQAPGVHPQPPGVHPSAPGVHPQPPGVHPSNPGVHPPTP----MPPMLRPPLPS 451
Query: 686 EAPSSVSHP 712
E P ++ P
Sbjct: 452 EGPGNIPPP 460
>X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein.
Length = 443
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 252 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 413
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>X80199-1|CAC27699.1| 703|Homo sapiens MLN51 protein.
Length = 703
Score = 31.5 bits (68), Expect = 4.1
Identities = 21/64 (32%), Positives = 26/64 (40%)
Frame = +2
Query: 539 PLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKPPLSSEAPSSVSHPLV 718
P + L QP +P P QT P P+ P +PG PP AP+ S P V
Sbjct: 568 PPQGMLVQPGMNLPHPGLHPHQTPAPLPNPGLYPPPVSMSPGQPPPQQLLAPTYFSAPGV 627
Query: 719 TGHG 730
G
Sbjct: 628 MNFG 631
>S81243-1|AAB36006.1| 684|Homo sapiens CHN protein.
Length = 684
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 252 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 413
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 93 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 144
>D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan
receptor protein.
Length = 626
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 252 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 413
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>BC050526-1|AAH50526.1| 703|Homo sapiens cancer susceptibility
candidate 3 protein.
Length = 703
Score = 31.5 bits (68), Expect = 4.1
Identities = 21/64 (32%), Positives = 26/64 (40%)
Frame = +2
Query: 539 PLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKPPLSSEAPSSVSHPLV 718
P + L QP +P P QT P P+ P +PG PP AP+ S P V
Sbjct: 568 PPQGMLVQPGMNLPHPGLHPHQTPAPLPNPGLYPPPVSMSPGQPPPQQLLAPTYFSAPGV 627
Query: 719 TGHG 730
G
Sbjct: 628 MNFG 631
>BC044656-1|AAH44656.1| 703|Homo sapiens cancer susceptibility
candidate 3 protein.
Length = 703
Score = 31.5 bits (68), Expect = 4.1
Identities = 21/64 (32%), Positives = 26/64 (40%)
Frame = +2
Query: 539 PLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKPPLSSEAPSSVSHPLV 718
P + L QP +P P QT P P+ P +PG PP AP+ S P V
Sbjct: 568 PPQGMLVQPGMNLPHPGLHPHQTPAPLPNPGLYPPPVSMSPGQPPPQQLLAPTYFSAPGV 627
Query: 719 TGHG 730
G
Sbjct: 628 MNFG 631
>AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 443
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 252 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 413
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 252 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 413
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 252 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 413
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 252 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 413
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 252 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 413
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,920,038
Number of Sequences: 237096
Number of extensions: 2579889
Number of successful extensions: 6367
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 5873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6359
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11104084400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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