BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_FL5_O09
(857 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein. 31 4.1
S81243-1|AAB36006.1| 684|Homo sapiens CHN protein. 31 4.1
D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan rec... 31 4.1
AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfam... 31 4.1
AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfam... 31 4.1
AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfam... 31 4.1
AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfam... 31 4.1
AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfam... 31 4.1
X64228-1|CAA45535.1| 2090|Homo sapiens putative oncogene protein. 31 5.4
BC064633-1|AAH64633.1| 467|Homo sapiens tubulointerstitial neph... 31 5.4
BC045620-1|AAH45620.2| 2090|Homo sapiens nucleoporin 214kDa prot... 31 5.4
BC009048-1|AAH09048.1| 218|Homo sapiens TINAGL1 protein protein. 31 5.4
AY358421-1|AAQ88787.1| 467|Homo sapiens LCN7 protein. 31 5.4
AK075398-1|BAC11596.1| 467|Homo sapiens protein ( Homo sapiens ... 31 5.4
AK027839-1|BAB55403.1| 218|Homo sapiens protein ( Homo sapiens ... 31 5.4
AF236155-1|AAG40154.1| 467|Homo sapiens tubulointerstitial neph... 31 5.4
AF236150-1|AAG38876.1| 467|Homo sapiens tubulointerstitial neph... 31 5.4
AF205436-1|AAG33699.1| 467|Homo sapiens oxidized-LDL responsive... 31 5.4
AB050719-1|BAB18727.1| 467|Homo sapiens glucocorticoid-inducibl... 31 5.4
AB050716-1|BAB18636.1| 467|Homo sapiens glucocorticoid-inducibl... 31 5.4
Z97986-1|CAC14067.1| 1086|Homo sapiens small optic lobes homolog... 30 9.4
U85647-1|AAC33822.1| 1086|Homo sapiens small optic lobes homolog... 30 9.4
BC150194-1|AAI50195.1| 459|Homo sapiens NRXN3 protein protein. 30 9.4
BC142649-1|AAI42650.1| 459|Homo sapiens NRXN3 protein protein. 30 9.4
BC112918-1|AAI12919.1| 415|Homo sapiens SOLH protein protein. 30 9.4
BC068469-1|AAH68469.1| 432|Homo sapiens neurexin 3 protein. 30 9.4
BC059368-1|AAH59368.1| 432|Homo sapiens neurexin 3 protein. 30 9.4
AJ493127-1|CAD37989.1| 398|Homo sapiens neurexin 3-beta protein. 30 9.4
AE006464-1|AAK61233.1| 1086|Homo sapiens small optic lobes homol... 30 9.4
AC018514-1|AAF99808.1| 82|Homo sapiens NRXNIII protein. 30 9.4
>X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein.
Length = 443
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 254 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 415
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>S81243-1|AAB36006.1| 684|Homo sapiens CHN protein.
Length = 684
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 254 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 415
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 93 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 144
>D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan
receptor protein.
Length = 626
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 254 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 415
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 443
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 254 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 415
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 254 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 415
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 254 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 415
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 254 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 415
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 254 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 415
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>X64228-1|CAA45535.1| 2090|Homo sapiens putative oncogene protein.
Length = 2090
Score = 31.1 bits (67), Expect = 5.4
Identities = 22/73 (30%), Positives = 30/73 (41%)
Frame = +1
Query: 529 SSHPPLRSRATSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSXAPSAYL 708
SS PP S S +TP +S S P++P+ P PLS P +
Sbjct: 574 SSFPPSTSAVKVNLSEKFTAAATSTPVSSSQSAPPMSPFSSASKPAASGPLSHPTPLS-A 632
Query: 709 TPSSLGMAKGVRP 747
PSS+ + V P
Sbjct: 633 PPSSVPLKSSVLP 645
>BC064633-1|AAH64633.1| 467|Homo sapiens tubulointerstitial
nephritis antigen-like 1 protein.
Length = 467
Score = 31.1 bits (67), Expect = 5.4
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = -1
Query: 764 HSLEIRGRTPLAMPSDEGVRYADGASDDNGGFNPGANSF*YGVRGLMEMDVKSGVVGVWN 585
HS++I G +P ++Y A+ + G VRG+ E D++S V+GVW
Sbjct: 400 HSVKITGWGEETLPDGRTLKYWTAANSWGPAW--GERGHFRIVRGVNECDIESFVLGVWG 457
Query: 584 R 582
R
Sbjct: 458 R 458
>BC045620-1|AAH45620.2| 2090|Homo sapiens nucleoporin 214kDa
protein.
Length = 2090
Score = 31.1 bits (67), Expect = 5.4
Identities = 22/73 (30%), Positives = 30/73 (41%)
Frame = +1
Query: 529 SSHPPLRSRATSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSXAPSAYL 708
SS PP S S +TP +S S P++P+ P PLS P +
Sbjct: 574 SSFPPSTSAVKVNLSEKFTAAATSTPVSSSQSAPPMSPFSSASKPAASGPLSHPTPLS-A 632
Query: 709 TPSSLGMAKGVRP 747
PSS+ + V P
Sbjct: 633 PPSSVPLKSSVLP 645
>BC009048-1|AAH09048.1| 218|Homo sapiens TINAGL1 protein protein.
Length = 218
Score = 31.1 bits (67), Expect = 5.4
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = -1
Query: 764 HSLEIRGRTPLAMPSDEGVRYADGASDDNGGFNPGANSF*YGVRGLMEMDVKSGVVGVWN 585
HS++I G +P ++Y A+ + G VRG+ E D++S V+GVW
Sbjct: 151 HSVKITGWGEETLPDGRTLKYWTAANSWGPAW--GERGHFRIVRGVNECDIESFVLGVWG 208
Query: 584 R 582
R
Sbjct: 209 R 209
>AY358421-1|AAQ88787.1| 467|Homo sapiens LCN7 protein.
Length = 467
Score = 31.1 bits (67), Expect = 5.4
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = -1
Query: 764 HSLEIRGRTPLAMPSDEGVRYADGASDDNGGFNPGANSF*YGVRGLMEMDVKSGVVGVWN 585
HS++I G +P ++Y A+ + G VRG+ E D++S V+GVW
Sbjct: 400 HSVKITGWGEETLPDGRTLKYWTAANSWGPAW--GERGHFRIVRGVNECDIESFVLGVWG 457
Query: 584 R 582
R
Sbjct: 458 R 458
>AK075398-1|BAC11596.1| 467|Homo sapiens protein ( Homo sapiens
cDNA PSEC0088 fis, clone PLACE1001098, highly similar to
P3ECSL; glucocorticoid-inducible protein. ).
Length = 467
Score = 31.1 bits (67), Expect = 5.4
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = -1
Query: 764 HSLEIRGRTPLAMPSDEGVRYADGASDDNGGFNPGANSF*YGVRGLMEMDVKSGVVGVWN 585
HS++I G +P ++Y A+ + G VRG+ E D++S V+GVW
Sbjct: 400 HSVKITGWGEETLPDGRTLKYWTAANSWGPAW--GERGHFRIVRGVNECDIESFVLGVWG 457
Query: 584 R 582
R
Sbjct: 458 R 458
>AK027839-1|BAB55403.1| 218|Homo sapiens protein ( Homo sapiens
cDNA FLJ14933 fis, clone PLACE1009861, weakly similar to
CATHEPSIN B-LIKE CYSTEINE PROTEINASE 6 PRECURSOR (EC
3.4.22.-). ).
Length = 218
Score = 31.1 bits (67), Expect = 5.4
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = -1
Query: 764 HSLEIRGRTPLAMPSDEGVRYADGASDDNGGFNPGANSF*YGVRGLMEMDVKSGVVGVWN 585
HS++I G +P ++Y A+ + G VRG+ E D++S V+GVW
Sbjct: 151 HSVKITGWGEETLPDGRTLKYWTAANSWGPAW--GERGHFRIVRGVNECDIESFVLGVWG 208
Query: 584 R 582
R
Sbjct: 209 R 209
>AF236155-1|AAG40154.1| 467|Homo sapiens tubulointerstitial
nephritis antigen-related protein protein.
Length = 467
Score = 31.1 bits (67), Expect = 5.4
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = -1
Query: 764 HSLEIRGRTPLAMPSDEGVRYADGASDDNGGFNPGANSF*YGVRGLMEMDVKSGVVGVWN 585
HS++I G +P ++Y A+ + G VRG+ E D++S V+GVW
Sbjct: 400 HSVKITGWGEETLPDGRTLKYWTAANSWGPAW--GERGHFRIVRGVNECDIESFVLGVWG 457
Query: 584 R 582
R
Sbjct: 458 R 458
>AF236150-1|AAG38876.1| 467|Homo sapiens tubulointerstitial
nephritis antigen-related protein precursor protein.
Length = 467
Score = 31.1 bits (67), Expect = 5.4
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = -1
Query: 764 HSLEIRGRTPLAMPSDEGVRYADGASDDNGGFNPGANSF*YGVRGLMEMDVKSGVVGVWN 585
HS++I G +P ++Y A+ + G VRG+ E D++S V+GVW
Sbjct: 400 HSVKITGWGEETLPDGRTLKYWTAANSWGPAW--GERGHFRIVRGVNECDIESFVLGVWG 457
Query: 584 R 582
R
Sbjct: 458 R 458
>AF205436-1|AAG33699.1| 467|Homo sapiens oxidized-LDL responsive
gene 2 protein.
Length = 467
Score = 31.1 bits (67), Expect = 5.4
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = -1
Query: 764 HSLEIRGRTPLAMPSDEGVRYADGASDDNGGFNPGANSF*YGVRGLMEMDVKSGVVGVWN 585
HS++I G +P ++Y A+ + G VRG+ E D++S V+GVW
Sbjct: 400 HSVKITGWGEETLPDGRTLKYWTAANSWGPAW--GERGHFRIVRGVNECDIESFVLGVWG 457
Query: 584 R 582
R
Sbjct: 458 R 458
>AB050719-1|BAB18727.1| 467|Homo sapiens glucocorticoid-inducible
protein protein.
Length = 467
Score = 31.1 bits (67), Expect = 5.4
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = -1
Query: 764 HSLEIRGRTPLAMPSDEGVRYADGASDDNGGFNPGANSF*YGVRGLMEMDVKSGVVGVWN 585
HS++I G +P ++Y A+ + G VRG+ E D++S V+GVW
Sbjct: 400 HSVKITGWGEETLPDGRTLKYWTAANSWGPAW--GERGHFRIVRGVNECDIESFVLGVWG 457
Query: 584 R 582
R
Sbjct: 458 R 458
>AB050716-1|BAB18636.1| 467|Homo sapiens glucocorticoid-inducible
protein protein.
Length = 467
Score = 31.1 bits (67), Expect = 5.4
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = -1
Query: 764 HSLEIRGRTPLAMPSDEGVRYADGASDDNGGFNPGANSF*YGVRGLMEMDVKSGVVGVWN 585
HS++I G +P ++Y A+ + G VRG+ E D++S V+GVW
Sbjct: 400 HSVKITGWGEETLPDGRTLKYWTAANSWGPAW--GERGHFRIVRGVNECDIESFVLGVWG 457
Query: 584 R 582
R
Sbjct: 458 R 458
>Z97986-1|CAC14067.1| 1086|Homo sapiens small optic lobes homolog
(Drosophila) protein.
Length = 1086
Score = 30.3 bits (65), Expect = 9.4
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = +1
Query: 526 ASSHPPLRSRATSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSXA 693
A ++PP S+ + PR P +P +++ NP+ +E P L+PP+ A
Sbjct: 209 AEANPPATSQGPAAEPEPPRV-PPFSPFSSTLQNNPVPRSRREVPPQLQPPVPEAA 263
>U85647-1|AAC33822.1| 1086|Homo sapiens small optic lobes homolog
protein.
Length = 1086
Score = 30.3 bits (65), Expect = 9.4
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = +1
Query: 526 ASSHPPLRSRATSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSXA 693
A ++PP S+ + PR P +P +++ NP+ +E P L+PP+ A
Sbjct: 209 AEANPPATSQGPAAEPEPPRV-PPFSPFSSTLQNNPVPRSRREVPPQLQPPVPEAA 263
>BC150194-1|AAI50195.1| 459|Homo sapiens NRXN3 protein protein.
Length = 459
Score = 30.3 bits (65), Expect = 9.4
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = +2
Query: 683 HQXLHQRISPPRHWAWLKGFAPLFQVNDESQLAPYKSSSTHNRXPSSNHPSXKGXHGH 856
H +H R SPPR AW G LF S + + SS+ + +S+ P H H
Sbjct: 2 HLRIHARRSPPRRPAWTLGIWFLFWGCIVSSV--WSSSNVASSSSTSSSPGSHSQHEH 57
>BC142649-1|AAI42650.1| 459|Homo sapiens NRXN3 protein protein.
Length = 459
Score = 30.3 bits (65), Expect = 9.4
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = +2
Query: 683 HQXLHQRISPPRHWAWLKGFAPLFQVNDESQLAPYKSSSTHNRXPSSNHPSXKGXHGH 856
H +H R SPPR AW G LF S + + SS+ + +S+ P H H
Sbjct: 2 HLRIHARRSPPRRPAWTLGIWFLFWGCIVSSV--WSSSNVASSSSTSSSPGSHSQHEH 57
>BC112918-1|AAI12919.1| 415|Homo sapiens SOLH protein protein.
Length = 415
Score = 30.3 bits (65), Expect = 9.4
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = +1
Query: 526 ASSHPPLRSRATSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSXA 693
A ++PP S+ + PR P +P +++ NP+ +E P L+PP+ A
Sbjct: 209 AEANPPATSQGPAAEPEPPRV-PPFSPFSSTLQNNPVPRSRREVPPQLQPPVPEAA 263
>BC068469-1|AAH68469.1| 432|Homo sapiens neurexin 3 protein.
Length = 432
Score = 30.3 bits (65), Expect = 9.4
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = +2
Query: 683 HQXLHQRISPPRHWAWLKGFAPLFQVNDESQLAPYKSSSTHNRXPSSNHPSXKGXHGH 856
H +H R SPPR AW G LF S + + SS+ + +S+ P H H
Sbjct: 2 HLRIHARRSPPRRPAWTLGIWFLFWGCIVSSV--WSSSNVASSSSTSSSPGSHSQHEH 57
>BC059368-1|AAH59368.1| 432|Homo sapiens neurexin 3 protein.
Length = 432
Score = 30.3 bits (65), Expect = 9.4
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = +2
Query: 683 HQXLHQRISPPRHWAWLKGFAPLFQVNDESQLAPYKSSSTHNRXPSSNHPSXKGXHGH 856
H +H R SPPR AW G LF S + + SS+ + +S+ P H H
Sbjct: 2 HLRIHARRSPPRRPAWTLGIWFLFWGCIVSSV--WSSSNVASSSSTSSSPGSHSQHEH 57
>AJ493127-1|CAD37989.1| 398|Homo sapiens neurexin 3-beta protein.
Length = 398
Score = 30.3 bits (65), Expect = 9.4
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = +2
Query: 683 HQXLHQRISPPRHWAWLKGFAPLFQVNDESQLAPYKSSSTHNRXPSSNHPSXKGXHGH 856
H +H R SPPR AW G LF S + + SS+ + +S+ P H H
Sbjct: 2 HLRIHARRSPPRRPAWTLGIWFLFWGCIVSSV--WSSSNVASSSSTSSSPGSHSQHEH 57
>AE006464-1|AAK61233.1| 1086|Homo sapiens small optic lobes homolog
protein.
Length = 1086
Score = 30.3 bits (65), Expect = 9.4
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = +1
Query: 526 ASSHPPLRSRATSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSXA 693
A ++PP S+ + PR P +P +++ NP+ +E P L+PP+ A
Sbjct: 209 AEANPPATSQGPAAEPEPPRV-PPFSPFSSTLQNNPVPRSRREVPPQLQPPVPEAA 263
>AC018514-1|AAF99808.1| 82|Homo sapiens NRXNIII protein.
Length = 82
Score = 30.3 bits (65), Expect = 9.4
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = +2
Query: 683 HQXLHQRISPPRHWAWLKGFAPLFQVNDESQLAPYKSSSTHNRXPSSNHPSXKGXHGH 856
H +H R SPPR AW G LF S + + SS+ + +S+ P H H
Sbjct: 2 HLRIHARRSPPRRPAWTLGIWFLFWGCIVSSV--WSSSNVASSSSTSSSPGSHSQHEH 57
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,801,144
Number of Sequences: 237096
Number of extensions: 2688359
Number of successful extensions: 6469
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 5925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6455
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10928473528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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