Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_FL5_M17
(875 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_03_0140 + 12700740-12700935,12701082-12701515 31 0.92
01_06_0718 - 31467530-31467892,31468017-31468178,31468268-314684... 30 2.1
09_02_0401 - 8575886-8575935,8576518-8576617,8576798-8576959,857... 30 2.8
03_05_0151 - 21284751-21284800,21285422-21285521,21285702-212858... 30 2.8
03_02_0502 - 8934646-8934834,8934974-8935121,8935228-8935304,893... 30 2.8
02_01_0083 - 566201-567127,567223-567464,567623-567880,568173-56... 29 3.7
09_06_0081 + 20745627-20748144,20748211-20748308 29 4.9
07_03_0481 - 18572206-18574314,18574591-18575185,18575304-185753... 29 4.9
07_03_0439 + 18212584-18213065,18214164-18215010 29 4.9
07_03_0200 - 15016084-15016342,15016814-15016869,15016963-150179... 29 4.9
01_01_0612 + 4565422-4565481,4565597-4565671,4565760-4566332,456... 29 4.9
11_05_0058 + 18719852-18719929,18720032-18720889,18720969-187211... 29 6.5
10_08_0255 - 16243951-16244098,16244612-16244817,16245588-162465... 29 6.5
10_01_0226 - 2401252-2401277,2403491-2403537,2404381-2405504 29 6.5
07_01_0011 - 81696-81892,83345-83621,83841-84189,84280-84644 29 6.5
05_05_0185 + 23064249-23064448,23064881-23064950,23065082-230651... 29 6.5
04_04_0207 + 23602065-23604315,23604611-23605116 29 6.5
03_05_0826 - 27994004-27994966,27995053-27996030,27996101-27996478 29 6.5
09_06_0287 + 22047404-22048409,22048754-22049967 28 8.5
>09_03_0140 + 12700740-12700935,12701082-12701515
Length = 209
Score = 31.5 bits (68), Expect = 0.92
Identities = 17/35 (48%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = -3
Query: 567 GGKDSAGPVTWL--AGTATVGGTRPQQRM*GGSGR 469
GG + P TW A A GG RP+QRM G GR
Sbjct: 133 GGGVESRPATWSSRAARAGAGGCRPRQRMACGDGR 167
>01_06_0718 -
31467530-31467892,31468017-31468178,31468268-31468415,
31468536-31468612,31468693-31468763,31468965-31469051,
31469138-31469602,31470357-31470659,31471151-31471202
Length = 575
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +3
Query: 186 WLDRWRIAVNVGKTAALIHGPVRIRVVPKKLNLRGVNIE--FKPKVRFLG 329
W RW+IAV K A +H +++ + + + ++ F+PKV G
Sbjct: 282 WPRRWKIAVGSAKGLAYLHEDCHPKIIHRDIKAANILLDYTFEPKVADFG 331
>09_02_0401 -
8575886-8575935,8576518-8576617,8576798-8576959,
8577106-8577253,8577436-8577458,8577615-8577685,
8577792-8577878,8578039-8578470,8578574-8579009
Length = 502
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/50 (26%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +3
Query: 186 WLDRWRIAVNVGKTAALIHGPVRIRVVPKKLNLRGVNIE--FKPKVRFLG 329
W RW+IAV + A +H +++ + + + ++ F+PKV G
Sbjct: 298 WQQRWKIAVGSARGLAYLHDDCSPKIIHRDVKASNILLDHGFEPKVADFG 347
>03_05_0151 -
21284751-21284800,21285422-21285521,21285702-21285863,
21286010-21286157,21286286-21286362,21286519-21286589,
21286696-21286782,21286943-21287374,21287478-21287913
Length = 520
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/50 (26%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +3
Query: 186 WLDRWRIAVNVGKTAALIHGPVRIRVVPKKLNLRGVNIE--FKPKVRFLG 329
W RW+IAV + A +H +++ + + + ++ F+PKV G
Sbjct: 298 WQQRWKIAVGSARGLAYLHDDCSPKIIHRDVKASNILLDHGFEPKVADFG 347
>03_02_0502 -
8934646-8934834,8934974-8935121,8935228-8935304,
8935427-8935497,8935594-8935680,8935852-8936316,
8936406-8936880
Length = 503
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/50 (26%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +3
Query: 186 WLDRWRIAVNVGKTAALIHGPVRIRVVPKKLNLRGVNI--EFKPKVRFLG 329
W RW+IAV + A +H +++ + + + + +F+PKV G
Sbjct: 322 WQQRWKIAVGSARGLAYLHDDCSPKIIHRDVKASNILLDHDFEPKVADFG 371
>02_01_0083 -
566201-567127,567223-567464,567623-567880,568173-568298,
568420-568489
Length = 540
Score = 29.5 bits (63), Expect = 3.7
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -1
Query: 509 VPGRSSVCEAVADVCLVNSELSPGRQPGHQHRPQHEPGRA 390
+ G++S+ V +V EL GRQP H HRP G +
Sbjct: 370 IVGKASLKSDVFSFGVVILELITGRQPIHHHRPPAAAGES 409
>09_06_0081 + 20745627-20748144,20748211-20748308
Length = 871
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
Frame = +2
Query: 479 PPHIRC-CGLVPPTVAVP--ASQVTGPAESFPP 568
PPH+R CGL PP P A+ V P PP
Sbjct: 174 PPHLRAPCGLAPPVPTPPALATHVPMPPAPAPP 206
>07_03_0481 -
18572206-18574314,18574591-18575185,18575304-18575371,
18577344-18577458,18578179-18578333,18578673-18580621,
18580691-18581372,18581550-18581621,18582558-18583199,
18583301-18583402,18585011-18585100
Length = 2192
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = -1
Query: 284 EIEFLGDDSDTDRTVDKSRSLAHIDRDPP 198
++++L D D+D +++ S SL H + PP
Sbjct: 220 KVQYLASDVDSDSSMEPSTSLEHSESPPP 248
>07_03_0439 + 18212584-18213065,18214164-18215010
Length = 442
Score = 29.1 bits (62), Expect = 4.9
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +3
Query: 495 AAAWYHLLSPSQRAR-LQAQQNLSLRNIVGAGRYVRNDVIARDLEGGVAHG 644
AA Y PS+ AR L A +L+ R AG R+ V +RD+ + HG
Sbjct: 85 AALSYLTTQPSRMARPLLAAPHLARRRDAAAGVEARDAVRSRDVRAALRHG 135
>07_03_0200 -
15016084-15016342,15016814-15016869,15016963-15017960,
15018707-15018768,15019242-15019274,15019697-15019881,
15020033-15020133,15020783-15020795,15021216-15021319,
15021593-15021693,15022773-15022849,15022965-15023021,
15023158-15023268,15023803-15023859
Length = 737
Score = 29.1 bits (62), Expect = 4.9
Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = +1
Query: 163 GFWIYCPSGWTVGGS-RSMWARLRLLSTVRSVSESSPRNSISEV*ISSLSRRSGFSGVTL 339
G+W P WT+ G RS+ L + S PR + ++++ R S S TL
Sbjct: 652 GYWFQTPEAWTIDGHYRSLIYMRPLAIWAMQYALSPPRTILEAPKVNTMDRTSYISPSTL 711
>01_01_0612 +
4565422-4565481,4565597-4565671,4565760-4566332,
4566438-4566551,4566676-4567377
Length = 507
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 478 TASHTLLRPGTTYCRRPSEPGYRPSRIFPSVISSG 582
TA H+LL P + + GY SR P+ SSG
Sbjct: 368 TAPHSLLHPSSASPYAAAAAGYESSRALPAAWSSG 402
>11_05_0058 +
18719852-18719929,18720032-18720889,18720969-18721118,
18722248-18722496,18722531-18722575,18722576-18722638
Length = 480
Score = 28.7 bits (61), Expect = 6.5
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +3
Query: 759 LMVRACRGSYWYPDERSELRSSSAVRPXK 845
L+V C GS +YP ++++LR P K
Sbjct: 359 LIVHVCNGSLYYPGKKTDLRRLEKREPHK 387
>10_08_0255 -
16243951-16244098,16244612-16244817,16245588-16246500,
16246577-16246713
Length = 467
Score = 28.7 bits (61), Expect = 6.5
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +1
Query: 196 VGGSRSMWARLRLLSTVRSVSESSPRNSISE-V*ISSLSRRSGFSGV 333
+GG R + + + L+ VR+ S S+P +S +E V SS SRR G V
Sbjct: 415 LGGPRGVGSGVDLIHFVRAPSNSTPSSSGAETVWPSSSSRRGGAGAV 461
>10_01_0226 - 2401252-2401277,2403491-2403537,2404381-2405504
Length = 398
Score = 28.7 bits (61), Expect = 6.5
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +1
Query: 514 YCRRPSEPGYRPSRIFPSVISSGPGGMSEMTLSPGTLKV 630
Y P P YRP+ + + S GG E+ L P +V
Sbjct: 168 YIPAPPAPEYRPAYFSNAAVVSAAGGHDELRLRPHLFRV 206
>07_01_0011 - 81696-81892,83345-83621,83841-84189,84280-84644
Length = 395
Score = 28.7 bits (61), Expect = 6.5
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +3
Query: 492 AAAAWYHLLSPSQRARLQ-AQQNLSLRNIVGAGRYVRNDVIA 614
AAA+W ++ + R Q + S+ VGAGRYV +D A
Sbjct: 3 AAASWSRSVTETVRGSHQYTVKGFSMAKGVGAGRYVSSDTFA 44
>05_05_0185 +
23064249-23064448,23064881-23064950,23065082-23065120,
23065639-23066067,23067322-23067627
Length = 347
Score = 28.7 bits (61), Expect = 6.5
Identities = 18/73 (24%), Positives = 29/73 (39%)
Frame = -1
Query: 374 SAGVRRHAQ*AVNVTPEKPDLRLKLDIHTSEIEFLGDDSDTDRTVDKSRSLAHIDRDPPT 195
SAG RR + + P + + + +IE D S K+ +H+ DPP
Sbjct: 44 SAGERRERGGGSSTSSVSPPMHTRNHDTSHDIEQNHDTSHVSHDPSKNHDTSHVSYDPPK 103
Query: 194 VQPLGQ*IQKPLH 156
+ L I + H
Sbjct: 104 IISLQNTILRMFH 116
>04_04_0207 + 23602065-23604315,23604611-23605116
Length = 918
Score = 28.7 bits (61), Expect = 6.5
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 8/70 (11%)
Frame = +3
Query: 150 MRMQRLLDLL--PQ----WLDRWRIAVNVGKTAALIHGPVRIRVVPKKLNLRGVNI--EF 305
+RM L DL+ P+ W DR RIA+ V + +H R + + L V + +F
Sbjct: 657 LRMGSLQDLIRAPKFAVGWNDRLRIAIGVAEGLVYLHRDYTPRFLHRDLKSSNVLLGDDF 716
Query: 306 KPKVRFLGCD 335
+P+V G D
Sbjct: 717 EPRVTGFGID 726
>03_05_0826 - 27994004-27994966,27995053-27996030,27996101-27996478
Length = 772
Score = 28.7 bits (61), Expect = 6.5
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = -3
Query: 849 WSXPASQ-PXRILTPNVRRGTNSSR-GRPLPSGXXAC 745
W P S P + L+ N+ R NSSR G P PSG C
Sbjct: 109 WVMPTSSAPRQTLSSNIHR--NSSRPGTPAPSGRLLC 143
>09_06_0287 + 22047404-22048409,22048754-22049967
Length = 739
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +3
Query: 186 WLDRWRIAVNVGKTAALIHGPVRIRVVPKKLNLRGVNI 299
W DR RIA K A +H V I ++ + +++ NI
Sbjct: 507 WSDRLRIATETAKAIAYLHSSVSIPIIHR--DIKSTNI 542
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,923,677
Number of Sequences: 37544
Number of extensions: 556063
Number of successful extensions: 1874
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1873
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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