Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_FL5_M17
(875 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 92 1e-18
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 90 3e-18
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 90 3e-18
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 90 3e-18
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 90 3e-18
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 90 3e-18
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 87 2e-17
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 75 1e-13
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 75 1e-13
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 75 1e-13
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 75 1e-13
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 68 1e-11
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 67 3e-11
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 67 3e-11
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 62 1e-09
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 62 1e-09
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 62 1e-09
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 58 1e-08
U14102-1|AAC46495.1| 299|Drosophila melanogaster putative rever... 55 1e-07
AJ564683-1|CAD92835.1| 108|Drosophila melanogaster pol protein ... 44 4e-04
BT023878-1|ABA81812.1| 1320|Drosophila melanogaster RE66325p pro... 29 8.4
BT021370-1|AAX33518.1| 884|Drosophila melanogaster LP07893p pro... 29 8.4
BT004503-1|AAO42667.1| 2201|Drosophila melanogaster GH07949p pro... 29 8.4
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 29 8.4
AY051548-1|AAK92972.1| 741|Drosophila melanogaster GH19611p pro... 29 8.4
AE014298-2950|ABC67193.1| 1456|Drosophila melanogaster CG32529-P... 29 8.4
AE014298-2949|AAF49024.2| 1280|Drosophila melanogaster CG32529-P... 29 8.4
AE014298-2947|AAF49026.2| 2529|Drosophila melanogaster CG32529-P... 29 8.4
AE014134-3261|AAF53907.2| 1320|Drosophila melanogaster CG2478-PA... 29 8.4
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 91.9 bits (218), Expect = 1e-18
Identities = 62/213 (29%), Positives = 102/213 (47%), Gaps = 4/213 (1%)
Frame = +3
Query: 3 LAPILYALYTNDIPTLKDNLREWEENVMLALFADDXXXXXXXXXXXXXIMRMQRLLDLLP 182
L P+LY+++++D+P + +ML+ +ADD + L
Sbjct: 704 LGPLLYSIFSSDMPLPYIYRPSPTQRIMLSTYADDTIVLSSDTLATAATRNNENYLKTFS 763
Query: 183 QWLDRWRIAVNVGKTAALIHGPVRIRVVPKKLN--LRGVNIEFKPKVRFLGCDIDRSLSM 356
W D+W I+VN KT +I ++ + +N ++G I+ + K +LG +D L++
Sbjct: 764 DWADKWGISVNAAKTGHVIF-TLKNDLPTNSMNVKIKGQTIKKESKQSYLGVTLDSKLTL 822
Query: 357 XXXXXXXXXXXXXXXFMLRPVLV--SGLPTRTKLAIYKTYVRYRLTYAAAAWYHLLSPSQ 530
L +L S LPT+TK+ I K+ + YA AAW L++ +Q
Sbjct: 823 SSHVTKLLGKYSTAYRKLTWILNGRSKLPTKTKILILKSVLSPIWQYAIAAWGPLVTDAQ 882
Query: 531 RARLQAQQNLSLRNIVGAGRYVRNDVIARDLEG 629
R+Q ++N +R+I AGRY RN I RDL G
Sbjct: 883 IRRVQVEENRKIRDICRAGRYTRNQTI-RDLFG 914
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial cds.
).
Length = 964
Score = 90.2 bits (214), Expect = 3e-18
Identities = 59/206 (28%), Positives = 96/206 (46%), Gaps = 3/206 (1%)
Frame = +3
Query: 3 LAPILYALYTNDIPTLKDNLREWEENVMLALFADDXXXXXXXXXXXXXIMRMQRLLDLLP 182
L PILY+++++D+P E +ML+ +ADD + L
Sbjct: 576 LGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFS 635
Query: 183 QWLDRWRIAVNVGKTAALIHGPVR-IRVVPKKLNLRGVNIEFKPKVRFLGCDIDRSLSMX 359
W D+W I+VN KT +I+ I K + ++G I+ + K +LG +D L++
Sbjct: 636 DWADKWGISVNAAKTGHVIYTLKNDIPTNLKTMKIKGQAIKKESKQSYLGVILDSKLTLS 695
Query: 360 XXXXXXXXXXXXXXFMLRPVLV--SGLPTRTKLAIYKTYVRYRLTYAAAAWYHLLSPSQR 533
+ +L S LPT TK+ I K+ + YA AAW L++ +Q
Sbjct: 696 PHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYAIAAWGPLVTDAQI 755
Query: 534 ARLQAQQNLSLRNIVGAGRYVRNDVI 611
R+Q ++N +R+I AGRY +N I
Sbjct: 756 RRIQVEENRKMRDICRAGRYTKNQTI 781
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 90.2 bits (214), Expect = 3e-18
Identities = 59/206 (28%), Positives = 96/206 (46%), Gaps = 3/206 (1%)
Frame = +3
Query: 3 LAPILYALYTNDIPTLKDNLREWEENVMLALFADDXXXXXXXXXXXXXIMRMQRLLDLLP 182
L PILY+++++D+P E +ML+ +ADD + L
Sbjct: 692 LGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFS 751
Query: 183 QWLDRWRIAVNVGKTAALIHGPVR-IRVVPKKLNLRGVNIEFKPKVRFLGCDIDRSLSMX 359
W D+W I+VN KT +I+ I K + ++G I+ + K +LG +D L++
Sbjct: 752 DWADKWGISVNAAKTGHVIYTLKNDIPTNLKTMKIKGQAIKKESKQSYLGVILDSKLTLS 811
Query: 360 XXXXXXXXXXXXXXFMLRPVLV--SGLPTRTKLAIYKTYVRYRLTYAAAAWYHLLSPSQR 533
+ +L S LPT TK+ I K+ + YA AAW L++ +Q
Sbjct: 812 PHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYAIAAWGPLVTDAQI 871
Query: 534 ARLQAQQNLSLRNIVGAGRYVRNDVI 611
R+Q ++N +R+I AGRY +N I
Sbjct: 872 RRIQVEENRKMRDICRAGRYTKNQTI 897
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 90.2 bits (214), Expect = 3e-18
Identities = 59/206 (28%), Positives = 96/206 (46%), Gaps = 3/206 (1%)
Frame = +3
Query: 3 LAPILYALYTNDIPTLKDNLREWEENVMLALFADDXXXXXXXXXXXXXIMRMQRLLDLLP 182
L PILY+++++D+P E +ML+ +ADD + L
Sbjct: 692 LGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFS 751
Query: 183 QWLDRWRIAVNVGKTAALIHGPVR-IRVVPKKLNLRGVNIEFKPKVRFLGCDIDRSLSMX 359
W D+W I+VN KT +I+ I K + ++G I+ + K +LG +D L++
Sbjct: 752 DWADKWGISVNAAKTGHVIYTLKNDIPTNLKTMKIKGQAIKKESKQSYLGVILDSKLTLS 811
Query: 360 XXXXXXXXXXXXXXFMLRPVLV--SGLPTRTKLAIYKTYVRYRLTYAAAAWYHLLSPSQR 533
+ +L S LPT TK+ I K+ + YA AAW L++ +Q
Sbjct: 812 PHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYAIAAWGPLVTDAQI 871
Query: 534 ARLQAQQNLSLRNIVGAGRYVRNDVI 611
R+Q ++N +R+I AGRY +N I
Sbjct: 872 RRIQVEENRKMRDICRAGRYTKNQTI 897
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 90.2 bits (214), Expect = 3e-18
Identities = 59/206 (28%), Positives = 96/206 (46%), Gaps = 3/206 (1%)
Frame = +3
Query: 3 LAPILYALYTNDIPTLKDNLREWEENVMLALFADDXXXXXXXXXXXXXIMRMQRLLDLLP 182
L PILY+++++D+P E +ML+ +ADD + L
Sbjct: 654 LGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFS 713
Query: 183 QWLDRWRIAVNVGKTAALIHGPVR-IRVVPKKLNLRGVNIEFKPKVRFLGCDIDRSLSMX 359
W D+W I+VN KT +I+ I K + ++G I+ + K +LG +D L++
Sbjct: 714 DWADKWGISVNAAKTGHVIYTLKNDIPTNLKTMKIKGQAIKKESKQSYLGVILDSKLTLS 773
Query: 360 XXXXXXXXXXXXXXFMLRPVLV--SGLPTRTKLAIYKTYVRYRLTYAAAAWYHLLSPSQR 533
+ +L S LPT TK+ I K+ + YA AAW L++ +Q
Sbjct: 774 PHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYAIAAWGPLVTDAQI 833
Query: 534 ARLQAQQNLSLRNIVGAGRYVRNDVI 611
R+Q ++N +R+I AGRY +N I
Sbjct: 834 RRIQVEENRKMRDICRAGRYTKNQTI 859
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 90.2 bits (214), Expect = 3e-18
Identities = 59/206 (28%), Positives = 96/206 (46%), Gaps = 3/206 (1%)
Frame = +3
Query: 3 LAPILYALYTNDIPTLKDNLREWEENVMLALFADDXXXXXXXXXXXXXIMRMQRLLDLLP 182
L PILY+++++D+P E +ML+ +ADD + L
Sbjct: 692 LGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFS 751
Query: 183 QWLDRWRIAVNVGKTAALIHGPVR-IRVVPKKLNLRGVNIEFKPKVRFLGCDIDRSLSMX 359
W D+W I+VN KT +I+ I K + ++G I+ + K +LG +D L++
Sbjct: 752 DWADKWGISVNAAKTGHVIYTLKNDIPTNLKTMKIKGQAIKKESKQSYLGVILDSKLTLS 811
Query: 360 XXXXXXXXXXXXXXFMLRPVLV--SGLPTRTKLAIYKTYVRYRLTYAAAAWYHLLSPSQR 533
+ +L S LPT TK+ I K+ + YA AAW L++ +Q
Sbjct: 812 PHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYAIAAWGPLVTDAQI 871
Query: 534 ARLQAQQNLSLRNIVGAGRYVRNDVI 611
R+Q ++N +R+I AGRY +N I
Sbjct: 872 RRIQVEENRKMRDICRAGRYTKNQTI 897
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 87.4 bits (207), Expect = 2e-17
Identities = 59/212 (27%), Positives = 98/212 (46%), Gaps = 3/212 (1%)
Frame = +3
Query: 3 LAPILYALYTNDIPTLKDNLREWEENVMLALFADDXXXXXXXXXXXXXIMRMQRLLDLLP 182
L P+LY+++++D+P E +ML+ +ADD + L
Sbjct: 692 LGPLLYSIFSSDMPLPYIYRPSPTERIMLSTYADDTIVLSSDTLATAATRNNENYLKSFS 751
Query: 183 QWLDRWRIAVNVGKTAALIHGPVR-IRVVPKKLNLRGVNIEFKPKVRFLGCDIDRSLSMX 359
W D+W I+VN KT +I + + + ++G I+ + K +LG +D L++
Sbjct: 752 DWADKWGISVNAAKTGHVIFTLKNDLPTSLRTMKIKGQVIKIESKQSYLGVILDSKLTLS 811
Query: 360 XXXXXXXXXXXXXXFMLRPVLV--SGLPTRTKLAIYKTYVRYRLTYAAAAWYHLLSPSQR 533
+ +L S LPT+TK+ I K+ + YA AAW L++ +Q
Sbjct: 812 SHVTKLMGKYTTAYRKMTWILNRRSKLPTKTKMLILKSVLSPIWQYAIAAWGPLVTDAQI 871
Query: 534 ARLQAQQNLSLRNIVGAGRYVRNDVIARDLEG 629
R+Q ++N +R+I AGRY N I RD G
Sbjct: 872 RRIQVEENRKMRDICRAGRYTSNQTI-RDRYG 902
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 75.4 bits (177), Expect = 1e-13
Identities = 58/212 (27%), Positives = 94/212 (44%), Gaps = 13/212 (6%)
Frame = +3
Query: 3 LAPILYALYTNDIP--TLKDNLREWE------ENVMLALFADDXXXXXXXXXXXXXIMRM 158
L P+LY++Y++D+P +KD +R N++LA +ADD I
Sbjct: 248 LGPVLYSIYSSDMPYPIVKDYMRNISFPDYHPTNIILATYADDTIILSRSKYTKLAINLN 307
Query: 159 QRLLDLLPQWLDRWRIAVNVGKTAALIHGPVRIRV---VPKKLNLRGVNIEFKPKVRFLG 329
Q L++ +W +W IA+N KT ++ + + P +N G K R+LG
Sbjct: 308 QNYLNVFCRWSKKWDIAINAKKTGHILFSLKKEQTNIYTPPLIN--GQRAAKLNKQRYLG 365
Query: 330 CDIDRSLSMXXXXXXXXXXXXXXXFMLRPVLV--SGLPTRTKLAIYKTYVRYRLTYAAAA 503
+DR L+ L ++ S LP K+ ++K V YA A
Sbjct: 366 LMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIWHYAIAI 425
Query: 504 WYHLLSPSQRARLQAQQNLSLRNIVGAGRYVR 599
W L+S +Q ++Q +N +R I+ A RY R
Sbjct: 426 WGSLVSDTQAKKIQTMENKYIRRIINASRYTR 457
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 75.4 bits (177), Expect = 1e-13
Identities = 58/212 (27%), Positives = 94/212 (44%), Gaps = 13/212 (6%)
Frame = +3
Query: 3 LAPILYALYTNDIP--TLKDNLREWE------ENVMLALFADDXXXXXXXXXXXXXIMRM 158
L P+LY++Y++D+P +KD +R N++LA +ADD I
Sbjct: 695 LGPVLYSIYSSDMPYPIVKDYMRNISFPDYHPTNIILATYADDTIILSRSKYTKLAINLN 754
Query: 159 QRLLDLLPQWLDRWRIAVNVGKTAALIHGPVRIRV---VPKKLNLRGVNIEFKPKVRFLG 329
Q L++ +W +W IA+N KT ++ + + P +N G K R+LG
Sbjct: 755 QNYLNVFCRWSKKWDIAINAKKTGHILFSLKKEQTNIYTPPLIN--GQRAAKLNKQRYLG 812
Query: 330 CDIDRSLSMXXXXXXXXXXXXXXXFMLRPVLV--SGLPTRTKLAIYKTYVRYRLTYAAAA 503
+DR L+ L ++ S LP K+ ++K V YA A
Sbjct: 813 LMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIWHYAIAI 872
Query: 504 WYHLLSPSQRARLQAQQNLSLRNIVGAGRYVR 599
W L+S +Q ++Q +N +R I+ A RY R
Sbjct: 873 WGSLVSDTQAKKIQTMENKYIRRIINASRYTR 904
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 75.4 bits (177), Expect = 1e-13
Identities = 58/212 (27%), Positives = 94/212 (44%), Gaps = 13/212 (6%)
Frame = +3
Query: 3 LAPILYALYTNDIP--TLKDNLREWE------ENVMLALFADDXXXXXXXXXXXXXIMRM 158
L P+LY++Y++D+P +KD +R N++LA +ADD I
Sbjct: 695 LGPVLYSIYSSDMPYPIVKDYMRNISFPDYHPTNIILATYADDTIILSRSKYTKLAINLN 754
Query: 159 QRLLDLLPQWLDRWRIAVNVGKTAALIHGPVRIRV---VPKKLNLRGVNIEFKPKVRFLG 329
Q L++ +W +W IA+N KT ++ + + P +N G K R+LG
Sbjct: 755 QNYLNVFCRWSKKWDIAINAKKTGHILFSLKKEQTNIYTPPLIN--GQRAAKLNKQRYLG 812
Query: 330 CDIDRSLSMXXXXXXXXXXXXXXXFMLRPVLV--SGLPTRTKLAIYKTYVRYRLTYAAAA 503
+DR L+ L ++ S LP K+ ++K V YA A
Sbjct: 813 LMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIWHYAIAI 872
Query: 504 WYHLLSPSQRARLQAQQNLSLRNIVGAGRYVR 599
W L+S +Q ++Q +N +R I+ A RY R
Sbjct: 873 WGSLVSDTQAKKIQTMENKYIRRIINASRYTR 904
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 75.4 bits (177), Expect = 1e-13
Identities = 58/212 (27%), Positives = 94/212 (44%), Gaps = 13/212 (6%)
Frame = +3
Query: 3 LAPILYALYTNDIP--TLKDNLREWE------ENVMLALFADDXXXXXXXXXXXXXIMRM 158
L P+LY++Y++D+P +KD +R N++LA +ADD I
Sbjct: 695 LGPVLYSIYSSDMPYPIVKDYMRNISFPDYHPTNIILATYADDTIILSRSKYTKLAINLN 754
Query: 159 QRLLDLLPQWLDRWRIAVNVGKTAALIHGPVRIRV---VPKKLNLRGVNIEFKPKVRFLG 329
Q L++ +W +W IA+N KT ++ + + P +N G K R+LG
Sbjct: 755 QNYLNVFCRWSKKWDIAINAKKTGHILFSLKKEQTNIYTPPLIN--GQRAAKLNKQRYLG 812
Query: 330 CDIDRSLSMXXXXXXXXXXXXXXXFMLRPVLV--SGLPTRTKLAIYKTYVRYRLTYAAAA 503
+DR L+ L ++ S LP K+ ++K V YA A
Sbjct: 813 LMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIWHYAIAI 872
Query: 504 WYHLLSPSQRARLQAQQNLSLRNIVGAGRYVR 599
W L+S +Q ++Q +N +R I+ A RY R
Sbjct: 873 WGSLVSDTQAKKIQTMENKYIRRIINASRYTR 904
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 68.1 bits (159), Expect = 1e-11
Identities = 54/209 (25%), Positives = 82/209 (39%), Gaps = 2/209 (0%)
Frame = +3
Query: 3 LAPILYALYTNDIPTLKDNLREWEENVMLALFADDXXXXXXXXXXXXXIMRMQRLLDLLP 182
L P+LY+++T D+P +LA +ADD +Q L L
Sbjct: 647 LGPLLYSVFTADLPCPNAYHMADPRKALLATYADDIALLYSSNCCNEAARGLQEYLTTLA 706
Query: 183 QWLDRWRIAVNVGKTAALIHGPVRIRVVPKKLNLRGVNIEFKPKVRFLGCDIDRSLSMXX 362
W RW + VN KT + V + L GV ++ + ++LG +D+ L+
Sbjct: 707 AWCKRWILKVNPQKTINPCFTLKTLSPVTAPIELEGVILDQPSQAKYLGITLDKRLTFGP 766
Query: 363 XXXXXXXXXXXXXFMLRPVL--VSGLPTRTKLAIYKTYVRYRLTYAAAAWYHLLSPSQRA 536
LR +L S + R K A+Y V Y W + + S
Sbjct: 767 HLKATTRRCYQRMQQLRWLLNRKSTMTLRAKRAVYVHCVAPIWLYGIQIW-GIAAKSNYN 825
Query: 537 RLQAQQNLSLRNIVGAGRYVRNDVIARDL 623
R+Q QN ++R I YVR + RDL
Sbjct: 826 RIQVLQNRAMRAITDCPYYVRGTTLHRDL 854
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 67.3 bits (157), Expect = 3e-11
Identities = 54/210 (25%), Positives = 89/210 (42%), Gaps = 2/210 (0%)
Frame = +3
Query: 3 LAPILYALYTNDIPTLKDNLREWEENVMLALFADDXXXXXXXXXXXXXIMRMQRLLDLLP 182
L P LY+++ +D+PT EE+V++A +ADD +Q LD
Sbjct: 648 LGPTLYSVFASDMPTHTPVTEVDEEDVLIATYADDTAVLTKSKSILAATSGLQEYLDAFQ 707
Query: 183 QWLDRWRIAVNVGKTAALIHGPVRIRVVPKKLNLRGVNIEFKPKVRFLGCDIDRSLSMXX 362
QW + W + +N K A + R P ++L G I ++LG +DR L+
Sbjct: 708 QWAENWNVRINAEKCANVTFAN-RTGSCP-GVSLNGRLIRHHQAYKYLGITLDRKLTFSR 765
Query: 363 XXXXXXXXXXXXXFMLRPVLV--SGLPTRTKLAIYKTYVRYRLTYAAAAWYHLLSPSQRA 536
+ ++ + L K+ IYK+ + L Y Y + + S
Sbjct: 766 HITNIQQAFRTKVARMSWLIAPRNKLSLGCKVNIYKSILAPCLFYGLQV-YGIAAKSHLN 824
Query: 537 RLQAQQNLSLRNIVGAGRYVRNDVIARDLE 626
+++ Q +LR I GA Y+R I RDL+
Sbjct: 825 KIRILQAKTLRRISGAPWYMRTRDIERDLK 854
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p protein.
Length = 718
Score = 67.3 bits (157), Expect = 3e-11
Identities = 54/210 (25%), Positives = 89/210 (42%), Gaps = 2/210 (0%)
Frame = +3
Query: 3 LAPILYALYTNDIPTLKDNLREWEENVMLALFADDXXXXXXXXXXXXXIMRMQRLLDLLP 182
L P LY+++ +D+PT EE+V++A +ADD +Q LD
Sbjct: 450 LGPTLYSVFASDMPTHTPVTEVDEEDVLIATYADDTAVLTKSKSILAATSGLQEYLDAFQ 509
Query: 183 QWLDRWRIAVNVGKTAALIHGPVRIRVVPKKLNLRGVNIEFKPKVRFLGCDIDRSLSMXX 362
QW + W + +N K A + R P ++L G I ++LG +DR L+
Sbjct: 510 QWAENWNVRINAEKCANVTFAN-RTGSCP-GVSLNGRLIRHHQAYKYLGITLDRKLTFSR 567
Query: 363 XXXXXXXXXXXXXFMLRPVLV--SGLPTRTKLAIYKTYVRYRLTYAAAAWYHLLSPSQRA 536
+ ++ + L K+ IYK+ + L Y Y + + S
Sbjct: 568 HITNIQQAFRTKVARMSWLIAPRNKLSLGCKVNIYKSILAPCLFYGLQV-YGIAAKSHLN 626
Query: 537 RLQAQQNLSLRNIVGAGRYVRNDVIARDLE 626
+++ Q +LR I GA Y+R I RDL+
Sbjct: 627 KIRILQAKTLRRISGAPWYMRTRDIERDLK 656
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 61.7 bits (143), Expect = 1e-09
Identities = 59/210 (28%), Positives = 87/210 (41%), Gaps = 2/210 (0%)
Frame = +3
Query: 3 LAPILYALYTNDIPTLKDNLREWEENVMLALFADDXXXXXXXXXXXXXIMRMQRLLDLLP 182
L PILY LYT D P + N+ + FADD + R L +
Sbjct: 642 LGPILYTLYTADFPI--------DYNLTTSTFADDTAILSRSKCPIKATALLSRHLTSVE 693
Query: 183 QWLDRWRIAVNVGKTAALIHGPVRIRVVPKKLNLRGVNIEFKPKVRFLGCDIDRSLSMXX 362
+WL WRI++NV K + + P LN + I +V +LG +DR L+
Sbjct: 694 RWLADWRISINVQKCKQVTFTLNKQTCPPLVLN--NICIPQADEVTYLGVHLDRRLTWRK 751
Query: 363 XXXXXXXXXXXXXFMLRPVLV--SGLPTRTKLAIYKTYVRYRLTYAAAAWYHLLSPSQRA 536
L ++ S L K +Y + ++ TY + W + S S
Sbjct: 752 HIEAKSKHLKLKARNLHWLINARSPLSLEFKALLYNSVLKPIWTYGSELWGNA-SRSNID 810
Query: 537 RLQAQQNLSLRNIVGAGRYVRNDVIARDLE 626
+Q Q+ LR I GA Y+RN+ I RDL+
Sbjct: 811 IIQRAQSRILRIITGAPWYLRNENIHRDLK 840
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding protein,
3' end. ).
Length = 858
Score = 61.7 bits (143), Expect = 1e-09
Identities = 58/209 (27%), Positives = 86/209 (41%), Gaps = 2/209 (0%)
Frame = +3
Query: 3 LAPILYALYTNDIPTLKDNLREWEENVMLALFADDXXXXXXXXXXXXXIMRMQRLLDLLP 182
L P LY +YT DIPT + ++ FADD ++ L +
Sbjct: 644 LGPTLYLIYTADIPT--------NSRLTVSTFADDTAILSRSRSPIQATAQLALYLIDIK 695
Query: 183 QWLDRWRIAVNVGKTAALIHGPVRIRVVPKKLNLRGVNIEFKPKVRFLGCDIDRSLSMXX 362
+WL WRI VN K + R P LN + + +V +LG +DR L+
Sbjct: 696 KWLSDWRIKVNEQKCKHVTFTLNRQDCPPLLLN--SIPLPKADEVTYLGVHLDRRLTWRR 753
Query: 363 XXXXXXXXXXXXXFMLRPVLVSGLPTRT--KLAIYKTYVRYRLTYAAAAWYHLLSPSQRA 536
L ++ SG P K+ +Y + ++ TY + W + S S
Sbjct: 754 HIEAKKTQLKLKANNLHWLINSGSPLSLDHKVLLYNSILKPIWTYGSQLWGNA-SNSNID 812
Query: 537 RLQAQQNLSLRNIVGAGRYVRNDVIARDL 623
+Q Q+ LR I GA YVR++ I RDL
Sbjct: 813 IIQRAQSKILRTITGAPWYVRSENIQRDL 841
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p protein.
Length = 888
Score = 61.7 bits (143), Expect = 1e-09
Identities = 59/210 (28%), Positives = 87/210 (41%), Gaps = 2/210 (0%)
Frame = +3
Query: 3 LAPILYALYTNDIPTLKDNLREWEENVMLALFADDXXXXXXXXXXXXXIMRMQRLLDLLP 182
L PILY LYT D P + N+ + FADD + R L +
Sbjct: 642 LGPILYTLYTADFPI--------DYNLTTSTFADDTAILSRSKCPIKATALLSRHLTSVE 693
Query: 183 QWLDRWRIAVNVGKTAALIHGPVRIRVVPKKLNLRGVNIEFKPKVRFLGCDIDRSLSMXX 362
+WL WRI++NV K + + P LN + I +V +LG +DR L+
Sbjct: 694 RWLADWRISINVQKCKQVTFTLNKQTCPPLVLN--NICIPQADEVTYLGVHLDRRLTWRK 751
Query: 363 XXXXXXXXXXXXXFMLRPVLV--SGLPTRTKLAIYKTYVRYRLTYAAAAWYHLLSPSQRA 536
L ++ S L K +Y + ++ TY + W + S S
Sbjct: 752 HIEAKSKHLKLKARNLHWLINARSPLSLEFKALLYNSVLKPIWTYGSELWGNA-SRSNID 810
Query: 537 RLQAQQNLSLRNIVGAGRYVRNDVIARDLE 626
+Q Q+ LR I GA Y+RN+ I RDL+
Sbjct: 811 IIQRAQSRILRIITGAPWYLRNENIHRDLK 840
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein.
Length = 908
Score = 58.4 bits (135), Expect = 1e-08
Identities = 57/210 (27%), Positives = 80/210 (38%), Gaps = 2/210 (0%)
Frame = +3
Query: 3 LAPILYALYTNDIPTLKDNLREWEENVMLALFADDXXXXXXXXXXXXXIMRMQRLLDLLP 182
L P+LY LY++D+P +L MLA FADD +Q
Sbjct: 646 LGPLLYCLYSHDMPQPDVSLYG---KSMLATFADDVCVTYRSRCEHDAADGIQDFAYRFS 702
Query: 183 QWLDRWRIAVNVGKTAALIHGPVRIRVVPKKLNLRGVNIEFKPKVRFLGCDIDRSLSMXX 362
+W RW I +N K+ + R P + + V + ++LG +DR L+
Sbjct: 703 EWARRWNIGINSSKSNNVCF--TLKRRTPPPVYIEEVPVPQPNAAKYLGVLLDRRLTFSK 760
Query: 363 XXXXXXXXXXXXXFMLRPVLVSG--LPTRTKLAIYKTYVRYRLTYAAAAWYHLLSPSQRA 536
+L S L KL IYK + Y W L S
Sbjct: 761 HVTDIRTRLRAKVAKHYWLLSSRSKLSLSNKLTIYKQILAPNWKYGCQIW-GLACDSHIK 819
Query: 537 RLQAQQNLSLRNIVGAGRYVRNDVIARDLE 626
R+QA QN R I G +VRN + RDL+
Sbjct: 820 RIQAIQNKVARLITGCEWFVRNTTLHRDLK 849
>U14102-1|AAC46495.1| 299|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 299
Score = 55.2 bits (127), Expect = 1e-07
Identities = 37/118 (31%), Positives = 59/118 (50%), Gaps = 2/118 (1%)
Frame = +3
Query: 282 LRGVNIEFKPKVRFLGCDIDRSLSMXXXXXXXXXXXXXXXFMLRPVLV--SGLPTRTKLA 455
++G I+ + K +LG +D L++ + +L S LPT+TK+
Sbjct: 1 IKGQVIKIESKQSYLGVILDSKLTLSSHVTKLMGKYTTAYRKMTWILNRRSKLPTKTKML 60
Query: 456 IYKTYVRYRLTYAAAAWYHLLSPSQRARLQAQQNLSLRNIVGAGRYVRNDVIARDLEG 629
I K+ + YA AAW L++ +Q R+Q ++N +R+I AGRY N I RD G
Sbjct: 61 ILKSVLSPIWQYAIAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTSNQTI-RDRYG 117
>AJ564683-1|CAD92835.1| 108|Drosophila melanogaster pol protein
protein.
Length = 108
Score = 43.6 bits (98), Expect = 4e-04
Identities = 21/58 (36%), Positives = 31/58 (53%)
Frame = +3
Query: 426 SGLPTRTKLAIYKTYVRYRLTYAAAAWYHLLSPSQRARLQAQQNLSLRNIVGAGRYVR 599
S LP K+ ++K V YA A W L+S +Q ++Q +N +R I+ A RY R
Sbjct: 22 SHLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASRYTR 79
>BT023878-1|ABA81812.1| 1320|Drosophila melanogaster RE66325p protein.
Length = 1320
Score = 29.1 bits (62), Expect = 8.4
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +1
Query: 448 SSLFTRHTSATASHTLL--RPGTTYCRRPSEPGYRPSRIFPSVISSGPGGMSEMTLSPG 618
SSL + +T+ H L R G+ + RR +EP + F S IS GP ++ +TL PG
Sbjct: 915 SSLTHYSSVSTSGHASLPSRVGSPHHRR-NEP---QNSSFRSTISGGPPSLAALTLHPG 969
>BT021370-1|AAX33518.1| 884|Drosophila melanogaster LP07893p
protein.
Length = 884
Score = 29.1 bits (62), Expect = 8.4
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +2
Query: 455 YLQDIRPLPPHIRCCGLVPPTVAVPASQVTGPAESFPP 568
Y Q P PPH PP V + V+GPA+ PP
Sbjct: 384 YYQHAGPPPPH-ELYEQQPPPPPVSSGSVSGPAQQQPP 420
>BT004503-1|AAO42667.1| 2201|Drosophila melanogaster GH07949p protein.
Length = 2201
Score = 29.1 bits (62), Expect = 8.4
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +2
Query: 455 YLQDIRPLPPHIRCCGLVPPTVAVPASQVTGPAESFPP 568
Y Q P PPH PP V + V+GPA+ PP
Sbjct: 1129 YYQHAGPPPPH-ELYEQQPPPPPVSSGSVSGPAQQQPP 1165
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 29.1 bits (62), Expect = 8.4
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = +3
Query: 3 LAPILYALYTNDIPT 47
L PILY LYT DIPT
Sbjct: 183 LGPILYTLYTADIPT 197
>AY051548-1|AAK92972.1| 741|Drosophila melanogaster GH19611p
protein.
Length = 741
Score = 29.1 bits (62), Expect = 8.4
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +1
Query: 448 SSLFTRHTSATASHTLL--RPGTTYCRRPSEPGYRPSRIFPSVISSGPGGMSEMTLSPG 618
SSL + +T+ H L R G+ + RR +EP + F S IS GP ++ +TL PG
Sbjct: 336 SSLTHYSSVSTSGHASLPSRVGSPHHRR-NEP---QNSSFRSTISGGPPSLAALTLHPG 390
>AE014298-2950|ABC67193.1| 1456|Drosophila melanogaster CG32529-PD,
isoform D protein.
Length = 1456
Score = 29.1 bits (62), Expect = 8.4
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +2
Query: 455 YLQDIRPLPPHIRCCGLVPPTVAVPASQVTGPAESFPP 568
Y Q P PPH PP V + V+GPA+ PP
Sbjct: 384 YYQHAGPPPPH-ELYEQQPPPPPVSSGSVSGPAQQQPP 420
>AE014298-2949|AAF49024.2| 1280|Drosophila melanogaster CG32529-PC,
isoform C protein.
Length = 1280
Score = 29.1 bits (62), Expect = 8.4
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +2
Query: 455 YLQDIRPLPPHIRCCGLVPPTVAVPASQVTGPAESFPP 568
Y Q P PPH PP V + V+GPA+ PP
Sbjct: 208 YYQHAGPPPPH-ELYEQQPPPPPVSSGSVSGPAQQQPP 244
>AE014298-2947|AAF49026.2| 2529|Drosophila melanogaster CG32529-PA,
isoform A protein.
Length = 2529
Score = 29.1 bits (62), Expect = 8.4
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +2
Query: 455 YLQDIRPLPPHIRCCGLVPPTVAVPASQVTGPAESFPP 568
Y Q P PPH PP V + V+GPA+ PP
Sbjct: 1457 YYQHAGPPPPH-ELYEQQPPPPPVSSGSVSGPAQQQPP 1493
>AE014134-3261|AAF53907.2| 1320|Drosophila melanogaster CG2478-PA
protein.
Length = 1320
Score = 29.1 bits (62), Expect = 8.4
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +1
Query: 448 SSLFTRHTSATASHTLL--RPGTTYCRRPSEPGYRPSRIFPSVISSGPGGMSEMTLSPG 618
SSL + +T+ H L R G+ + RR +EP + F S IS GP ++ +TL PG
Sbjct: 915 SSLTHYSSVSTSGHASLPSRVGSPHHRR-NEP---QNSSFRSTISGGPPSLAALTLHPG 969
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,084,163
Number of Sequences: 53049
Number of extensions: 892180
Number of successful extensions: 3011
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 2705
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2973
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4250176164
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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