Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_FL5_M17
(875 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical pr... 42 6e-04
Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical pr... 30 1.9
U39996-3|AAA81089.1| 621|Caenorhabditis elegans Hypothetical pr... 30 1.9
U39996-2|AAU20848.1| 607|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z96047-5|CAB09415.1| 379|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z74041-9|CAA98523.2| 801|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z74035-5|CAA98485.2| 801|Caenorhabditis elegans Hypothetical pr... 29 5.8
AL021147-1|CAI46595.1| 72|Caenorhabditis elegans Hypothetical ... 29 5.8
AC006722-6|AAK68411.2| 488|Caenorhabditis elegans Hypothetical ... 29 5.8
AC006645-11|AAF39850.1| 472|Caenorhabditis elegans Hypothetical... 29 5.8
>U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical
protein F31A9.6 protein.
Length = 358
Score = 41.9 bits (94), Expect = 6e-04
Identities = 46/165 (27%), Positives = 64/165 (38%), Gaps = 2/165 (1%)
Frame = +3
Query: 3 LAPILYALYTNDIPTLKDNLREWEENVMLALFADDXXXXXXXXXXXXXIMRMQRLLDLLP 182
L+P+L+ +Y NDI ++ E V FADD +Q LD +
Sbjct: 83 LSPLLFGIYVNDISSI------LPEKVACKQFADDTKLYASTPKTESE-NNLQSALDAVV 135
Query: 183 QWLDRWRIAVNVGKTAALIHGPVRIRVVPKKLNLRGVNIEFKPKVRFLGCDIDRSLSMXX 362
W ++ +N KT +H V R + K +L G IE K R LG I L
Sbjct: 136 DWTKGSKLTLNQSKT---VHVTVGKRRIDFKYHLDGYPIERKAITRDLGFLISEKLDF-- 190
Query: 363 XXXXXXXXXXXXXFMLRPVLVSGLPTRTKLAI--YKTYVRYRLTY 491
F L + + KL I YKT++R RL Y
Sbjct: 191 -SDHWRKCINLAKFQLANMFNKYSTSNKKLMILLYKTFIRPRLEY 234
>Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical protein
F18C12.1 protein.
Length = 4171
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = -1
Query: 701 LARTYYERSYILRASXVTNSMSDSTFKVPGDNVISDIPPGPDDITE 564
+ R Y S+ LR S T S S STF V++ +P D+I E
Sbjct: 885 IQRLYDALSWTLRHSISTTSQSISTFLSQAIEVLNTVPQSIDEIAE 930
>U39996-3|AAA81089.1| 621|Caenorhabditis elegans Hypothetical
protein C56E6.3a protein.
Length = 621
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -3
Query: 822 RILTPNVRRGTNSSRGRPLPSGXXACSGAIQWRCSWGLFSARS 694
R+ +P VRR ++SRGR + + +W LFS+ S
Sbjct: 200 RLFSPFVRRNRSNSRGRDKDKDNLKDGSSTNLKSTWSLFSSSS 242
>U39996-2|AAU20848.1| 607|Caenorhabditis elegans Hypothetical
protein C56E6.3b protein.
Length = 607
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -3
Query: 822 RILTPNVRRGTNSSRGRPLPSGXXACSGAIQWRCSWGLFSARS 694
R+ +P VRR ++SRGR + + +W LFS+ S
Sbjct: 200 RLFSPFVRRNRSNSRGRDKDKDNLKDGSSTNLKSTWSLFSSSS 242
>Z96047-5|CAB09415.1| 379|Caenorhabditis elegans Hypothetical
protein DY3.6 protein.
Length = 379
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = +1
Query: 502 PGTTYCRRPSEPGYRPSRIFPSVISSGPGGMSEMTLSPGTLKVESLMEFV 651
PG T+ R P G+ +++ P ISS P + +++ SP TL S +F+
Sbjct: 11 PGETWVRTPHTNGWERTKLRPVQISSEPIFIPQVSSSP-TLVSSSSPKFI 59
>Z74041-9|CAA98523.2| 801|Caenorhabditis elegans Hypothetical
protein F47G9.3 protein.
Length = 801
Score = 28.7 bits (61), Expect = 5.8
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = -1
Query: 341 VNVTPEKPDLRLKLDIHTSEIEFLGDDSDTDRTVDKSRSLAHI 213
VNV P +LR K +I + LG D TVD S S H+
Sbjct: 598 VNVKPMSMELRGKREIIKARTVKLGQSLDLVFTVDNSTSARHV 640
>Z74035-5|CAA98485.2| 801|Caenorhabditis elegans Hypothetical
protein F47G9.3 protein.
Length = 801
Score = 28.7 bits (61), Expect = 5.8
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = -1
Query: 341 VNVTPEKPDLRLKLDIHTSEIEFLGDDSDTDRTVDKSRSLAHI 213
VNV P +LR K +I + LG D TVD S S H+
Sbjct: 598 VNVKPMSMELRGKREIIKARTVKLGQSLDLVFTVDNSTSARHV 640
>AL021147-1|CAI46595.1| 72|Caenorhabditis elegans Hypothetical
protein H32K21.1 protein.
Length = 72
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 616 RAITSFLTYRPAPTILRRERFCW 548
R I S L+YRP P ++ R R+ W
Sbjct: 50 RHIRSGLSYRPMPNLMARYRYVW 72
>AC006722-6|AAK68411.2| 488|Caenorhabditis elegans Hypothetical
protein Y19D10A.11 protein.
Length = 488
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/53 (24%), Positives = 23/53 (43%)
Frame = -3
Query: 768 LPSGXXACSGAIQWRCSWGLFSARSYILRALVHITSEXSHKLHERLHLQGPGR 610
+P C A+ WR + LF ++I+ + T KLH + + G+
Sbjct: 211 MPVSGLLCESALGWRSIYYLFGGLTFIIYIVFWFTYSDDPKLHRNVSQKELGK 263
>AC006645-11|AAF39850.1| 472|Caenorhabditis elegans Hypothetical
protein F56A4.12 protein.
Length = 472
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/53 (24%), Positives = 23/53 (43%)
Frame = -3
Query: 768 LPSGXXACSGAIQWRCSWGLFSARSYILRALVHITSEXSHKLHERLHLQGPGR 610
+P C A+ WR + LF ++I+ + T KLH + + G+
Sbjct: 195 MPVSGLLCESALGWRSIYYLFGGLTFIIYIVFWFTYSDDPKLHRNVSQKELGK 247
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,229,617
Number of Sequences: 27780
Number of extensions: 405559
Number of successful extensions: 1279
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1279
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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