Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_FL5_M16
(839 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 116 4e-27
SPBC32F12.02 |rec14||recombination protein Rec14|Schizosaccharom... 32 0.088
SPBC713.04c |||U3 snoRNP-associated protein Utp1|Schizosaccharom... 32 0.088
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 32 0.12
SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|c... 31 0.27
SPCC1620.04c |mug55||Cdc20/Fizzy family WD repeat protein|Schizo... 30 0.47
SPBC16A3.05c |rae1||RNA export factor Rae1|Schizosaccharomyces p... 29 0.62
SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13... 29 0.82
SPAC27D7.10c |||But2 family protein|Schizosaccharomyces pombe|ch... 29 1.1
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 29 1.1
SPAC27D7.09c |||But2 family protein|Schizosaccharomyces pombe|ch... 29 1.1
SPCC1672.07 |||U3 snoRNP-associated protein Utp21 |Schizosacchar... 28 1.4
SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase Swr1|Schizo... 28 1.4
SPAC3H8.08c |||transcription factor|Schizosaccharomyces pombe|ch... 28 1.9
SPBC1A4.07c |||U3 snoRNP-associated protein Sof1|Schizosaccharom... 28 1.9
SPAC630.14c |tup12||transcriptional corepressor Tup12 |Schizosac... 27 2.5
SPAC24H6.11c |||sulfate transporter |Schizosaccharomyces pombe|c... 27 2.5
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 27 3.3
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 27 3.3
SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineur... 27 4.4
SPAC1786.03 |cut11|SPAC24C9.01|integral membrane nucleoporin|Sch... 27 4.4
SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces p... 27 4.4
SPAC343.04c |gnr1||heterotrimeric G protein beta subunit Gnr1|Sc... 27 4.4
SPBC15D4.14 |taf73||TATA-binding protein associated factor |Schi... 26 5.8
SPBC23G7.04c |nif1||SEL1 repear protein Nif1|Schizosaccharomyces... 26 5.8
SPCC16A11.04 |snx12||sorting nexin Snx12 |Schizosaccharomyces po... 26 5.8
SPAC23C4.02 |crn1||actin binding protein, coronin Crn1|Schizosac... 26 5.8
SPCC1672.10 |mis16||kinetochore protein Mis16 |Schizosaccharomyc... 26 5.8
SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr 1||... 26 5.8
SPAC17D4.01 |pex7|SPAC1834.12|peroxin-7 |Schizosaccharomyces pom... 26 5.8
SPAC15E1.02c |||DUF1761 family protein|Schizosaccharomyces pombe... 26 5.8
SPAC8F11.03 |msh3|swi4|MutS protein homolog 3|Schizosaccharomyce... 26 5.8
SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyc... 26 7.6
SPBC365.05c |slu7||splicing factor Slu7|Schizosaccharomyces pomb... 26 7.6
SPCC126.01c ||SPCC576.18c|conserved fungal protein|Schizosacchar... 26 7.6
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 116 bits (279), Expect = 4e-27
Identities = 82/250 (32%), Positives = 139/250 (55%), Gaps = 12/250 (4%)
Frame = +3
Query: 51 LLCTASPEKTIKVFDVVNFDMINMISIDFEPYRGEWVHSAGDPISALAVSDRNTNKIHVY 230
L T + +K++KVFDV + D++N+I ++F P +S S +AVS + I +
Sbjct: 104 LFITGADDKSLKVFDVESIDLVNIIDLEFLPKAICCFNSPSLKTSLIAVSSAESPLIFFF 163
Query: 231 DGTQASGTPLHTFETLHQTAVAVIKYNPVFETAVSVDKAGIVEYWTGPKHEYNFPKTVR- 407
+ + G L+T + H V ++Y + +S+D G+VEYW+ P+ + P T
Sbjct: 164 E-SGGDGEVLYTVKK-HTAPVHCLRYLSTLDCFLSIDIGGMVEYWS-PEEPFQKPDTAEL 220
Query: 408 FQSKLDTDLYDFVKNKTCPTALDFSPDGRKMASISL-DRKVRVFHFLTGKLHKVIDES-- 578
F K TDLY F K K+ PT+L+ S ++IS D KVRVF +G+ +DE+
Sbjct: 221 FNMKSQTDLYIFKKQKSVPTSLEVSHFENFWSTISYPDCKVRVFDTKSGRAILELDENPS 280
Query: 579 --LQRFQEL--QHQTQQ---LPNMEFGRRMATERDLEKSECVSLGNVA-FDCSGHFVLYG 734
++ + L + T+ + ++E GRR+A ERD+EK +++G A FD S ++LYG
Sbjct: 281 NAAKKVEALFEKEDTESSYYMSHVELGRRIAIERDIEK-HGLTVGTTAIFDESEKYLLYG 339
Query: 735 TLLGAKLVNL 764
+++G K+V++
Sbjct: 340 SIVGIKVVSI 349
>SPBC32F12.02 |rec14||recombination protein
Rec14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 302
Score = 32.3 bits (70), Expect = 0.088
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +3
Query: 12 APISHVAANSTGTLLCTASPEKTIKVFDVVNFDMINMISIDFEPYRGEWVHS-AGDPISA 188
+P+ VA + TLL A K I ++DV++ D + + W+ + A +P+
Sbjct: 188 SPVRSVAFSPGSTLLAAAGDSKMITIYDVLSGDQVGQLR-----GHAAWIFAVAFNPVGD 242
Query: 189 LAVSDRNTNKIHVYD 233
L +S KI ++D
Sbjct: 243 LLLSADVEGKIKIWD 257
>SPBC713.04c |||U3 snoRNP-associated protein
Utp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 854
Score = 32.3 bits (70), Expect = 0.088
Identities = 11/28 (39%), Positives = 23/28 (82%)
Frame = +3
Query: 15 PISHVAANSTGTLLCTASPEKTIKVFDV 98
P+S ++ NS+G+LL + S +KT++++D+
Sbjct: 469 PVSSLSFNSSGSLLASGSWDKTVRIWDI 496
Score = 26.6 bits (56), Expect = 4.4
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +3
Query: 468 ALDFSPDGRKMASISLDRKVRVFHFLTGKLHKVID 572
+L F PDG+++ SLD ++ ++ GK +ID
Sbjct: 514 SLAFHPDGKEVCVASLDGQLTFWNVQEGKQTSLID 548
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 31.9 bits (69), Expect = 0.12
Identities = 22/64 (34%), Positives = 32/64 (50%)
Frame = -2
Query: 835 RPEECEVQRPEXSVLAKCGAPVVARLTSLAPSSVPYSTKCPLQSNATLPSDTHSDFSRSR 656
RPEE S +++ G+ A +TS PSS T L S++ S HS SRS
Sbjct: 582 RPEETISTVSTTSTVSESGSSS-ASITSTYPSSTLSMTTSHLSSSSVHSSSAHSSSSRSS 640
Query: 655 SVAI 644
S+++
Sbjct: 641 SMSL 644
>SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 502
Score = 30.7 bits (66), Expect = 0.27
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +3
Query: 477 FSPDGRKMASISLDRKVRVFHFLTGK 554
FSPDGR +A+ S D VR++ TGK
Sbjct: 397 FSPDGRCIATASFDSSVRLWDGKTGK 422
Score = 29.1 bits (62), Expect = 0.82
Identities = 11/23 (47%), Positives = 19/23 (82%)
Frame = +3
Query: 468 ALDFSPDGRKMASISLDRKVRVF 536
A+D+SPDG+++AS D+ VR++
Sbjct: 478 AVDWSPDGQRVASGGADKAVRIW 500
>SPCC1620.04c |mug55||Cdc20/Fizzy family WD repeat
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 509
Score = 29.9 bits (64), Expect = 0.47
Identities = 23/98 (23%), Positives = 46/98 (46%)
Frame = +3
Query: 18 ISHVAANSTGTLLCTASPEKTIKVFDVVNFDMINMISIDFEPYRGEWVHSAGDPISALAV 197
+S +A +S G L A +++++ + N F + G+ A PI+ +
Sbjct: 204 VSSLAYSSDGGFLAIARVNGFVEIWNRKTKN--NRCDYKFH-HDGDISCMAWSPINWTLL 260
Query: 198 SDRNTNKIHVYDGTQASGTPLHTFETLHQTAVAVIKYN 311
+T I+VY T++ +HT + +HQ V +++N
Sbjct: 261 VGGSTGNIYVYRRTKSMMRRVHTIKKVHQEQVCGLEWN 298
>SPBC16A3.05c |rae1||RNA export factor Rae1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 352
Score = 29.5 bits (63), Expect = 0.62
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = +3
Query: 468 ALDFSPDGRKMASISLDRKVRVFHFLTGKLHKV 566
++++S DG K+AS S+D+ +VF TG+ +V
Sbjct: 79 SVNWSRDGTKVASGSVDKSAKVFDIQTGQNQQV 111
>SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 777
Score = 29.1 bits (62), Expect = 0.82
Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
Frame = +3
Query: 42 TGTLLCTASPEKTIKVFDVVNFDMINMISIDFEPYRGEWVHSAGDPISALAVSDRNTNKI 221
TG+ L + S +KT++V+++ + I + WV+ G P + + N I
Sbjct: 200 TGSFLLSGSRDKTVQVWNIKKRSAVRTIPVFHSVEAIGWVN--GQPEEKILYTAGEGNLI 257
Query: 222 HVYDGTQASGTPLHT-FETLHQTAVAVIKYNPVFE-TAVSV 338
+D SG+ L +T H A+I+ P E T +SV
Sbjct: 258 LAWD--WKSGSRLDPGVDTTHSETNAIIQVVPFSENTLLSV 296
Score = 27.9 bits (59), Expect = 1.9
Identities = 19/83 (22%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Frame = +3
Query: 15 PISHVAANSTGTLLCTASPEKTIKVFDVVNFDMIN--------MISIDFEPYRGEWVHSA 170
P+ + + T TLL T E +KV+D+ + + + ++ F ++ WV ++
Sbjct: 105 PVITMTIDPTNTLLATGGAEGLVKVWDIAGAYVTHSFRGHGGVISALCFGKHQNTWVLAS 164
Query: 171 GDPISALAVSDRNTNK-IHVYDG 236
G S + + D N+++ + V++G
Sbjct: 165 GADDSRVRLWDLNSSRSMAVFEG 187
Score = 26.2 bits (55), Expect = 5.8
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +3
Query: 468 ALDFSPDGRKMASISLDRKVRVFHFLTGKLHKVI 569
A+ S DGR +AS S D+ ++++ TG++ V+
Sbjct: 470 AIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVL 503
>SPAC27D7.10c |||But2 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 383
Score = 28.7 bits (61), Expect = 1.1
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = -3
Query: 543 GSGTLAPSCRGLSRPSFCRPARSPAPSDKSCSSRSRTGPCRASTETS 403
G+G P+C G++ +F P+ S + S + +S S A TS
Sbjct: 149 GAGNGNPNCAGIAIEAFVSPSSSSSSSSSAATSTSTRVSSSAKASTS 195
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 28.7 bits (61), Expect = 1.1
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +3
Query: 477 FSPDGRKMASISLDRKVRVFHFLTGKLHKVIDESLQRFQEL--QHQTQQLPNMEFGRRMA 650
FSPDG+ + + + DR+++++ T K+ V Q L H + + + G R A
Sbjct: 368 FSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGS-GDRTA 426
Query: 651 TERDLEKSECV 683
D+E +C+
Sbjct: 427 RLWDVETGQCI 437
Score = 26.2 bits (55), Expect = 5.8
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +3
Query: 450 NKTCPTALDFSPDGRKMASISLDRKVRVF 536
+K ++ FSPDGR+ AS S D + R++
Sbjct: 579 HKNSVISVCFSPDGRQFASGSGDLRARIW 607
>SPAC27D7.09c |||But2 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 383
Score = 28.7 bits (61), Expect = 1.1
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = -3
Query: 543 GSGTLAPSCRGLSRPSFCRPARSPAPSDKSCSSRSRTGPCRASTETS 403
G+G P+C G++ +F P+ S + S + +S S A TS
Sbjct: 149 GAGNGNPNCAGIAIEAFVSPSSSSSSSSSAATSTSTRVSSSAKASTS 195
>SPCC1672.07 |||U3 snoRNP-associated protein Utp21
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 902
Score = 28.3 bits (60), Expect = 1.4
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 465 TALDFSPDGRKMASISLDRKVRVFHFLTGKL 557
T+ DFS GR + + SLD +R + TG L
Sbjct: 576 TSFDFSDTGRWLVTASLDGTIRTWDLPTGHL 606
>SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase
Swr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1288
Score = 28.3 bits (60), Expect = 1.4
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = -2
Query: 169 AECTHSPRYGSKSIDIMLIISKLTTSNTFIVFSGD 65
++C+HSP YGS I + + K +TS + +++ D
Sbjct: 867 SKCSHSPIYGSNLIRLAEKLPKHSTSIDYTLYAKD 901
>SPAC3H8.08c |||transcription factor|Schizosaccharomyces pombe|chr
1|||Manual
Length = 563
Score = 27.9 bits (59), Expect = 1.9
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 393 PKTVRFQSKLDTDLYDFVKNKTCPTAL 473
P+T SKL D++DF N P+AL
Sbjct: 534 PETTEDPSKLFADIFDFTSNYFIPSAL 560
>SPBC1A4.07c |||U3 snoRNP-associated protein
Sof1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 436
Score = 27.9 bits (59), Expect = 1.9
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = +3
Query: 468 ALDFSPDGRKMASISLDRKVRVFHFLTG 551
++DFSP G++ S S D+ +R+++ G
Sbjct: 278 SVDFSPTGQEFVSGSYDKTIRIYNVREG 305
>SPAC630.14c |tup12||transcriptional corepressor Tup12
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 586
Score = 27.5 bits (58), Expect = 2.5
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = +3
Query: 465 TALDFSPDGRKMASISLDRKVRVF 536
T + FSPDG+ +A+ SLD+ +R++
Sbjct: 421 TTVMFSPDGQFIAAGSLDKVIRIW 444
>SPAC24H6.11c |||sulfate transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 958
Score = 27.5 bits (58), Expect = 2.5
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Frame = +3
Query: 42 TGTLLCTASPEKT-IKVFDVVNFDMI---NMISIDFEPYRGEWVHSAGDPISALAVSDRN 209
T T +C + +VF+ VN + NM+ D++ YR + +H AG LAV ++
Sbjct: 706 TLTTMCFGGDDNCGCQVFEDVNSSLEYCENMLLDDYDVYRTKLLHKAGYS-HTLAVPGKH 764
Query: 210 TNKIHVYDGTQASGTPLHTFETLHQTAVAVIK 305
I + + S +P H + L Q A++ +K
Sbjct: 765 KQNISMAE--TFSPSPRH--DLLRQVAMSSVK 792
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 27.1 bits (57), Expect = 3.3
Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 4/105 (3%)
Frame = +3
Query: 222 HVYDGTQASGTPLHTFETLHQTAVAVIKYNPVFET-AVSVDKAGIVEYWTGPKHEYNFPK 398
+VY +G+PL +F V+ + Y+ FE A +V + KH P
Sbjct: 3616 NVYSEVGVNGSPLESFNNSSFNEVSSLGYDHDFENRAQAVSMLCQIYAIVIQKHSSISP- 3674
Query: 399 TVRFQSKLDTDL---YDFVKNKTCPTALDFSPDGRKMASISLDRK 524
T FQS + +L D + NK P+++ K++SI +K
Sbjct: 3675 TASFQS-IGHELSRFADLLSNKLFPSSIPLYASADKVSSIRDQQK 3718
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 27.1 bits (57), Expect = 3.3
Identities = 20/70 (28%), Positives = 33/70 (47%)
Frame = -2
Query: 760 LTSLAPSSVPYSTKCPLQSNATLPSDTHSDFSRSRSVAILLPNSMLGSCCV*CCNSWNRC 581
LTS+ +S ++ PL S + S + S + S + + +LP S + S + NS
Sbjct: 375 LTSVNSTSATSASSTPLTSANSTTSTSVSSTAPSYNTSSVLPTSSVSSTPLSSANSTTAT 434
Query: 580 RLSSITLCSL 551
SS L S+
Sbjct: 435 SASSTPLSSV 444
Score = 27.1 bits (57), Expect = 3.3
Identities = 20/70 (28%), Positives = 33/70 (47%)
Frame = -2
Query: 760 LTSLAPSSVPYSTKCPLQSNATLPSDTHSDFSRSRSVAILLPNSMLGSCCV*CCNSWNRC 581
LTS+ +S ++ PL S + S + S + S + + +LP S + S + NS
Sbjct: 489 LTSVNSTSATSASSTPLTSANSTTSTSVSSTAPSYNTSSVLPTSSVSSTPLSSANSTTAT 548
Query: 580 RLSSITLCSL 551
SS L S+
Sbjct: 549 SASSTPLTSV 558
>SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineurin
deletion Rnc1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 398
Score = 26.6 bits (56), Expect = 4.4
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -2
Query: 703 NATLPSDTHSDFSRSRSVAILLPNSMLGS 617
N+T P T SD + R + +L+ +S++GS
Sbjct: 164 NSTNPDGTPSDANTPRKLRLLIAHSLMGS 192
>SPAC1786.03 |cut11|SPAC24C9.01|integral membrane
nucleoporin|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 26.6 bits (56), Expect = 4.4
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = +1
Query: 670 SLSACRWATWRSTAADTSCCTARCWAPSSSTWPQPVR 780
S + R WR A TSCC + + WP +R
Sbjct: 218 SYAILRSYIWRFAALLTSCCRRIAYTKTPPKWPLSLR 254
>SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 932
Score = 26.6 bits (56), Expect = 4.4
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +3
Query: 465 TALDFSPDGRKMASISLDRKVRVFH 539
T++ FSP+G+ +AS S DR V ++H
Sbjct: 78 TSVRFSPNGQYLASGSDDRVVIIWH 102
>SPAC343.04c |gnr1||heterotrimeric G protein beta subunit
Gnr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 26.6 bits (56), Expect = 4.4
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 27 VAANSTGTLLCTASPEKTIKVFDVVNFDMI 116
++ + G L +AS +KT +FDVVN +
Sbjct: 219 ISYSHNGRYLASASKDKTAIIFDVVNLKRV 248
>SPBC15D4.14 |taf73||TATA-binding protein associated factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 26.2 bits (55), Expect = 5.8
Identities = 25/118 (21%), Positives = 55/118 (46%)
Frame = +3
Query: 12 APISHVAANSTGTLLCTASPEKTIKVFDVVNFDMINMISIDFEPYRGEWVHSAGDPISAL 191
API V + G TAS ++T +++DV + + + F ++ + + P +A
Sbjct: 446 APIWDVQFSPFGYYFATASHDQTARLWDVEHAAPLRV----FVGHQNDVDCVSFHPNAAY 501
Query: 192 AVSDRNTNKIHVYDGTQASGTPLHTFETLHQTAVAVIKYNPVFETAVSVDKAGIVEYW 365
+ + + ++D + GT + F H + V+ + + + S D++GI++ W
Sbjct: 502 LATGSSDHTTRMWD-VRTGGT-VRVFNA-HHSPVSALCMSADGLSLASADESGIIKVW 556
>SPBC23G7.04c |nif1||SEL1 repear protein Nif1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 681
Score = 26.2 bits (55), Expect = 5.8
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -2
Query: 244 ACVPSYT*ILFVFLSETAKAEMGSPAECTHSPRYG 140
AC P T + F+FL +TA + EC HS G
Sbjct: 492 ACSPK-THVSFLFLLKTATQLLNKLVECLHSSDLG 525
>SPCC16A11.04 |snx12||sorting nexin Snx12 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1010
Score = 26.2 bits (55), Expect = 5.8
Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 5/52 (9%)
Frame = +3
Query: 537 HFLTGKLHKVIDESLQRFQELQHQTQQLPNMEFGRRMATE-----RDLEKSE 677
HF G + +S F++ H+ +++ N+ RR+ +E R LE++E
Sbjct: 294 HFQVGARRLRLKDSQHSFEQYIHEIKKISNISDARRLRSELMVQRRQLEQTE 345
>SPAC23C4.02 |crn1||actin binding protein, coronin
Crn1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 26.2 bits (55), Expect = 5.8
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +3
Query: 468 ALDFSPDGRKMASISLDRKVRVFHFLTGK 554
++ F+ DG ++ + S D+KVRV+ T K
Sbjct: 181 SMSFNADGTRLVTTSRDKKVRVWDPRTDK 209
>SPCC1672.10 |mis16||kinetochore protein Mis16 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 430
Score = 26.2 bits (55), Expect = 5.8
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Frame = +3
Query: 18 ISHVAANSTGT-LLCTASPEKTIKVFDVVN-FDMINMI-SIDFEPYRGEWVHSAGDPISA 188
I+ VA N LL TAS +KT+ ++D+ N + ++ + + E Y EW +PI A
Sbjct: 284 INAVAINPFNDYLLATASADKTVALWDLRNPYQRLHTLEGHEDEVYGLEW-SPHDEPILA 342
Query: 189 LAVSDR 206
+ +DR
Sbjct: 343 SSSTDR 348
>SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1158
Score = 26.2 bits (55), Expect = 5.8
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -3
Query: 267 TCAAECPKLACRRTRESYLCFCPRQLK 187
T EC C R R Y CPR+L+
Sbjct: 372 TLLTECYSSTCSRNRLCYSISCPRRLE 398
>SPAC17D4.01 |pex7|SPAC1834.12|peroxin-7 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 308
Score = 26.2 bits (55), Expect = 5.8
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +3
Query: 9 LAPISHVAANSTGTLLCTASPEKTIKVFDVVNFDMINMISIDFEPYRG-EW 158
LA S ++NS LL TAS + T ++FD I + + E R +W
Sbjct: 234 LAVRSIKSSNSAHDLLATASYDMTSRIFDPEQHSCIRKVDLHSEFVRDVDW 284
>SPAC15E1.02c |||DUF1761 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 148
Score = 26.2 bits (55), Expect = 5.8
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +3
Query: 669 KSECVSLGNVAFDCSGHFVLYGTLLGAKLVNLATTGAPH 785
+ + LG +AFD + F++YG L+G + A + APH
Sbjct: 11 RPSAILLG-IAFDHAASFLVYGPLMG-DIWKRAMSTAPH 47
>SPAC8F11.03 |msh3|swi4|MutS protein homolog 3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1004
Score = 26.2 bits (55), Expect = 5.8
Identities = 19/74 (25%), Positives = 29/74 (39%)
Frame = +3
Query: 567 IDESLQRFQELQHQTQQLPNMEFGRRMATERDLEKSECVSLGNVAFDCSGHFVLYGTLLG 746
+D+S RF++ QH T Q ++ KS V +G +A S +Y
Sbjct: 214 LDDSFFRFEQTQHGTLQASQFILCVADNVDKSKAKSGRVQVGLIAIQLSSGTTVYDHFQD 273
Query: 747 AKLVNLATTGAPHF 788
L + T HF
Sbjct: 274 DFLRSELQTRLSHF 287
>SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 340
Score = 25.8 bits (54), Expect = 7.6
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 450 NKTCPTALDFSPDGRKMASISLDRKVRVF 536
+K T+L S DG + S S+D VR+F
Sbjct: 218 HKDIITSLAISKDGSSLLSNSMDNTVRIF 246
>SPBC365.05c |slu7||splicing factor Slu7|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 25.8 bits (54), Expect = 7.6
Identities = 9/34 (26%), Positives = 19/34 (55%)
Frame = +2
Query: 428 GPVRLREEQDLSDGAGLLAGRQKDGLDKPRQEGA 529
GP + + + G ++ + KD +++PR+ GA
Sbjct: 102 GPAATKYRKGACENCGAMSHKVKDCMERPRKRGA 135
>SPCC126.01c ||SPCC576.18c|conserved fungal
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 369
Score = 25.8 bits (54), Expect = 7.6
Identities = 20/62 (32%), Positives = 26/62 (41%)
Frame = +3
Query: 366 TGPKHEYNFPKTVRFQSKLDTDLYDFVKNKTCPTALDFSPDGRKMASISLDRKVRVFHFL 545
T PK + FP+ ++ LYD NKTC T S SL + +V H
Sbjct: 48 TTPKKK-QFPRLFVCEASHICKLYDLEINKTCKTYKGHSGPVTCCQIESLRKDGKVRHIY 106
Query: 546 TG 551
TG
Sbjct: 107 TG 108
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,279,837
Number of Sequences: 5004
Number of extensions: 66850
Number of successful extensions: 330
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 286
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 328
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 414453330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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