Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_FL5_M16
(839 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110500-6|CAB60429.1| 629|Caenorhabditis elegans Hypothetical ... 227 6e-60
Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical pr... 36 0.047
AC025726-36|AAL27268.1| 487|Caenorhabditis elegans Hypothetical... 35 0.083
AC025726-35|AAL27267.1| 489|Caenorhabditis elegans Hypothetical... 35 0.083
AF047651-2|AAL13318.1| 486|Caenorhabditis elegans Hypothetical ... 33 0.33
AF047651-1|AAK67207.1| 484|Caenorhabditis elegans Hypothetical ... 33 0.33
Z81490-1|CAB04014.1| 510|Caenorhabditis elegans Hypothetical pr... 31 1.0
AF330595-1|AAK00353.1| 510|Caenorhabditis elegans SMU-1 protein. 31 1.0
Z81085-3|CAB03115.1| 769|Caenorhabditis elegans Hypothetical pr... 31 1.3
AY551963-1|AAS65427.1| 458|Caenorhabditis elegans histone acety... 31 1.3
AL032627-14|CAA21549.1| 386|Caenorhabditis elegans Hypothetical... 31 1.3
AF106581-4|AAC78211.1| 458|Caenorhabditis elegans Myst family h... 31 1.3
Z68315-3|CAA92670.1| 430|Caenorhabditis elegans Hypothetical pr... 30 1.8
AF039040-2|AAO91670.1| 615|Caenorhabditis elegans Hypothetical ... 29 4.1
AF039040-1|AAB94184.1| 553|Caenorhabditis elegans Hypothetical ... 29 4.1
Z69659-1|CAA93483.1| 329|Caenorhabditis elegans Hypothetical pr... 29 5.4
AC024778-2|AAF60566.2| 2325|Caenorhabditis elegans Neuronal igca... 29 5.4
Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z50863-3|CAA90735.1| 830|Caenorhabditis elegans Hypothetical pr... 28 7.2
AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical ... 28 7.2
Z81548-4|CAB04465.1| 916|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z81503-5|CAB04114.1| 916|Caenorhabditis elegans Hypothetical pr... 28 9.5
AF039046-14|AAB94214.1| 388|Caenorhabditis elegans Prion-like-(... 28 9.5
AF024496-2|AAB70340.1| 1459|Caenorhabditis elegans Hypothetical ... 28 9.5
AC024757-3|AAF59448.2| 414|Caenorhabditis elegans Hypothetical ... 28 9.5
>AL110500-6|CAB60429.1| 629|Caenorhabditis elegans Hypothetical
protein Y87G2A.6 protein.
Length = 629
Score = 227 bits (556), Expect = 6e-60
Identities = 111/260 (42%), Positives = 173/260 (66%), Gaps = 6/260 (2%)
Frame = +3
Query: 9 LAPISHVAANSTGTLLCTA-SPEKTIKVFDVVNFDMINMISIDFEPYRGEWVHSAGDPIS 185
L+ SH+ AN GTLL T +K++KVFD+ NFDMINMI +DF P WVH + DPI+
Sbjct: 98 LSEFSHICANIDGTLLATVCEADKSVKVFDIENFDMINMIKLDFPPKTANWVHQSNDPIA 157
Query: 186 ALAVSDRNTNKIHVYDGTQASGTPLHTFETLHQTAVAVIKYNPVFETAVSVDKAGIVEYW 365
LA+ ++ KI V DG +A+ P+ + LH T V +I+Y+ + VS+D++G++E W
Sbjct: 158 HLAIGAADSGKIIVVDG-KATAAPICIKDKLHSTPVKIIEYSQSLDIIVSIDESGMIECW 216
Query: 366 TGPKHEYNFPKT-VRFQSKLDTDLYDFVKNKTCPTALDFSPDGRKMASISLDRKVRVFHF 542
G + ++ FP+T + ++ KL+TDLYDFVK KT P F P G K+A+ + DRK+R+F+
Sbjct: 217 NGERGDFQFPETKLTWEYKLETDLYDFVKAKTIPVCATFDPSGLKLATFAEDRKIRIFNV 276
Query: 543 LTGKLHKVIDESLQRF--QELQHQTQQLPNMEFGRRMATERDLEKSECVSL--GNVAFDC 710
TGKL ++IDE+ Q++ + +++ L +ME+ RR+A+E++++K + SL + FD
Sbjct: 277 KTGKLAQLIDETTQKYHCEAKENKNYGLQHMEWSRRLASEKEMDKDKKNSLKYTKICFDQ 336
Query: 711 SGHFVLYGTLLGAKLVNLAT 770
SG+F+LY T +G K+ NL T
Sbjct: 337 SGNFLLYPTPIGVKVFNLVT 356
>Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical
protein C14B1.4 protein.
Length = 376
Score = 35.5 bits (78), Expect = 0.047
Identities = 41/184 (22%), Positives = 78/184 (42%), Gaps = 2/184 (1%)
Frame = +3
Query: 18 ISHVAANSTGTLLCTASPEKTIKVFDVVNFDMINMISIDFEPYRGEWVHSAG-DPISALA 194
++ +A +S + +AS +KT+K+F++V M + +V +P S+L
Sbjct: 132 VNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLK-----GHNNYVFCCNFNPQSSLV 186
Query: 195 VSDRNTNKIHVYDGTQASGTPLHTFETLHQTAVAVIKYNPVFETAVSVDKAGIVEYWTGP 374
VS + ++D +G + T H V+ + +N S G+V W
Sbjct: 187 VSGSFDESVRIWD--VKTGMCIKTLPA-HSDPVSAVSFNRDGSLIASGSYDGLVRIW--- 240
Query: 375 KHEYNFPKTVRFQSKLDTDLYDFVKNKTCPTA-LDFSPDGRKMASISLDRKVRVFHFLTG 551
T Q + V ++ P A + FSP+G+ + + +LD ++++ F G
Sbjct: 241 -------DTANGQC-----IKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKG 288
Query: 552 KLHK 563
K K
Sbjct: 289 KTLK 292
>AC025726-36|AAL27268.1| 487|Caenorhabditis elegans Hypothetical
protein Y71G12B.1b protein.
Length = 487
Score = 34.7 bits (76), Expect = 0.083
Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
Frame = +3
Query: 279 HQTAVAVIKYNPV--FETAVSVDKAGIVEYWTGPKHEYNFPKTVRFQSKLDTDLYDFVKN 452
H A+ +K++P E S D G + W P+ +K + Y + +
Sbjct: 74 HNHAINQVKFSPSKEHELLASGDCEGRITIWKLSDQPVPPPQDEMPSNKENWIRYKVLNH 133
Query: 453 KTCPTALDFSPDGRKMASISLDRKVRVFHFLTGK 554
+ AL + P G ++AS+S D + V LTGK
Sbjct: 134 NSDVNALCWDPSGTQLASVSNDHTLAVHDALTGK 167
>AC025726-35|AAL27267.1| 489|Caenorhabditis elegans Hypothetical
protein Y71G12B.1a protein.
Length = 489
Score = 34.7 bits (76), Expect = 0.083
Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
Frame = +3
Query: 279 HQTAVAVIKYNPV--FETAVSVDKAGIVEYWTGPKHEYNFPKTVRFQSKLDTDLYDFVKN 452
H A+ +K++P E S D G + W P+ +K + Y + +
Sbjct: 76 HNHAINQVKFSPSKEHELLASGDCEGRITIWKLSDQPVPPPQDEMPSNKENWIRYKVLNH 135
Query: 453 KTCPTALDFSPDGRKMASISLDRKVRVFHFLTGK 554
+ AL + P G ++AS+S D + V LTGK
Sbjct: 136 NSDVNALCWDPSGTQLASVSNDHTLAVHDALTGK 169
>AF047651-2|AAL13318.1| 486|Caenorhabditis elegans Hypothetical
protein C05D2.10b protein.
Length = 486
Score = 32.7 bits (71), Expect = 0.33
Identities = 28/118 (23%), Positives = 55/118 (46%)
Frame = +3
Query: 12 APISHVAANSTGTLLCTASPEKTIKVFDVVNFDMINMISIDFEPYRGEWVHSAGDPISAL 191
AP+S + G + TAS ++T V+DV +++N++S + E H + L
Sbjct: 281 APVSCCEWLAGGQQMVTASWDRTANVWDVEKGEVVNILS----GHESELNHCSTHSNQKL 336
Query: 192 AVSDRNTNKIHVYDGTQASGTPLHTFETLHQTAVAVIKYNPVFETAVSVDKAGIVEYW 365
++ + ++D +A + + F+ HQ +V + +N + S D A V+ W
Sbjct: 337 VLTSSKDSTFRLWDFREAIQS-VAVFQG-HQDSVTSVSFNTDYRIVSSSDDA-TVKIW 391
>AF047651-1|AAK67207.1| 484|Caenorhabditis elegans Hypothetical
protein C05D2.10a protein.
Length = 484
Score = 32.7 bits (71), Expect = 0.33
Identities = 28/118 (23%), Positives = 55/118 (46%)
Frame = +3
Query: 12 APISHVAANSTGTLLCTASPEKTIKVFDVVNFDMINMISIDFEPYRGEWVHSAGDPISAL 191
AP+S + G + TAS ++T V+DV +++N++S + E H + L
Sbjct: 279 APVSCCEWLAGGQQMVTASWDRTANVWDVEKGEVVNILS----GHESELNHCSTHSNQKL 334
Query: 192 AVSDRNTNKIHVYDGTQASGTPLHTFETLHQTAVAVIKYNPVFETAVSVDKAGIVEYW 365
++ + ++D +A + + F+ HQ +V + +N + S D A V+ W
Sbjct: 335 VLTSSKDSTFRLWDFREAIQS-VAVFQG-HQDSVTSVSFNTDYRIVSSSDDA-TVKIW 389
>Z81490-1|CAB04014.1| 510|Caenorhabditis elegans Hypothetical
protein CC4.3 protein.
Length = 510
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +3
Query: 453 KTCPTALDFSPDGRKMASISLDRKVRVFHFLTGKLHK 563
K+ P + FSPD + S S D + V++++ GKL K
Sbjct: 214 KSYPESAVFSPDANYLVSGSKDGFIEVWNYMNGKLRK 250
>AF330595-1|AAK00353.1| 510|Caenorhabditis elegans SMU-1 protein.
Length = 510
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +3
Query: 453 KTCPTALDFSPDGRKMASISLDRKVRVFHFLTGKLHK 563
K+ P + FSPD + S S D + V++++ GKL K
Sbjct: 214 KSYPESAVFSPDANYLVSGSKDGFIEVWNYMNGKLRK 250
>Z81085-3|CAB03115.1| 769|Caenorhabditis elegans Hypothetical
protein F46F3.4 protein.
Length = 769
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +3
Query: 489 GRKMASISLDRKVRVFHFLTGKLHKVIDES--LQRFQELQHQTQQLPNMEFGR 641
G K S+ + ++VR +V DE L+R +EL+H+T QL N +GR
Sbjct: 141 GVKPQSVEMVQRVRAVR------RQVADEETELRRLRELEHETAQLQNKNYGR 187
>AY551963-1|AAS65427.1| 458|Caenorhabditis elegans histone
acetyltransferase protein.
Length = 458
Score = 30.7 bits (66), Expect = 1.3
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = -2
Query: 577 LSSITLCSLPVRKWNTRTFLSRLIE--AIFLPSGEKSSAVGQVLFFTKSYRSVSSFD*NL 404
L I +C ++ ++T L R +E A+ P G + + ++ FF R S+ NL
Sbjct: 198 LDCIYICEFCLKYLKSKTCLKRHMEKCAMCHPPGNQIYSHDKLSFFEIDGRKNKSYAQNL 257
Query: 403 TVLGKLYSCFGPVQYSTMPAL 341
+L KL+ + Y T P L
Sbjct: 258 CLLAKLFLDHKTLYYDTDPFL 278
>AL032627-14|CAA21549.1| 386|Caenorhabditis elegans Hypothetical
protein Y41C4A.11 protein.
Length = 386
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = +3
Query: 54 LCTASPEKTIKVFDVVNFDMINMISIDFEPYRGEWVHSAGDPISALAVSDRNTNKIHVYD 233
+ TAS ++ I++FD F +IN + + R VH P +S + KI V+D
Sbjct: 164 IATASDDQQIRIFDAETFSLINEFTAHSDFIRSLTVH----PTLPYLISASDDRKIRVWD 219
>AF106581-4|AAC78211.1| 458|Caenorhabditis elegans Myst family
histone acetyltransferase-like protein 1 protein.
Length = 458
Score = 30.7 bits (66), Expect = 1.3
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = -2
Query: 577 LSSITLCSLPVRKWNTRTFLSRLIE--AIFLPSGEKSSAVGQVLFFTKSYRSVSSFD*NL 404
L I +C ++ ++T L R +E A+ P G + + ++ FF R S+ NL
Sbjct: 198 LDCIYICEFCLKYLKSKTCLKRHMEKCAMCHPPGNQIYSHDKLSFFEIDGRKNKSYAQNL 257
Query: 403 TVLGKLYSCFGPVQYSTMPAL 341
+L KL+ + Y T P L
Sbjct: 258 CLLAKLFLDHKTLYYDTDPFL 278
>Z68315-3|CAA92670.1| 430|Caenorhabditis elegans Hypothetical
protein F28C6.3 protein.
Length = 430
Score = 30.3 bits (65), Expect = 1.8
Identities = 26/120 (21%), Positives = 52/120 (43%), Gaps = 2/120 (1%)
Frame = +3
Query: 18 ISHVAANSTGTLLCTASPEKTIKVFDVVNFDMINMISI--DFEPYRGEWVHSAGDPISAL 191
++ V + ++L + S +KT+K+FD + + + P R H G+ + L
Sbjct: 173 VNTVIFHPRDSILISGSNDKTVKLFDFSKTAVKKAMKTLSEVYPVRALSCHPGGEFL--L 230
Query: 192 AVSDRNTNKIHVYDGTQASGTPLHTFETLHQTAVAVIKYNPVFETAVSVDKAGIVEYWTG 371
+D T +++ + QA + + H +V + Y+ V+ K G V+ W G
Sbjct: 231 VATDHPTVRLYNIETAQAYASA--NPDDQHTESVTDVHYSENARLYVTASKDGHVKIWDG 288
>AF039040-2|AAO91670.1| 615|Caenorhabditis elegans Hypothetical
protein T22B11.4b protein.
Length = 615
Score = 29.1 bits (62), Expect = 4.1
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Frame = +2
Query: 353 SRVLDGSEARIQFPQDGEVSVEARHGPVRLREEQDLSDGAGLLAG-RQKDGLDKP---RQ 520
+R + S ++ Q DGE +E+ H L+ E +DG+ ++ G Q+D L P +
Sbjct: 252 ARQIKASASKDQQIYDGETIIESEHLKFDLKPEVYTADGSEIVDGPPQEDALPGPVKDAE 311
Query: 521 EGASVPLPDRQTAQGDRRE 577
E A+V D+ +GD E
Sbjct: 312 ETATVVQVDKD--EGDVSE 328
>AF039040-1|AAB94184.1| 553|Caenorhabditis elegans Hypothetical
protein T22B11.4a protein.
Length = 553
Score = 29.1 bits (62), Expect = 4.1
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Frame = +2
Query: 353 SRVLDGSEARIQFPQDGEVSVEARHGPVRLREEQDLSDGAGLLAG-RQKDGLDKP---RQ 520
+R + S ++ Q DGE +E+ H L+ E +DG+ ++ G Q+D L P +
Sbjct: 252 ARQIKASASKDQQIYDGETIIESEHLKFDLKPEVYTADGSEIVDGPPQEDALPGPVKDAE 311
Query: 521 EGASVPLPDRQTAQGDRRE 577
E A+V D+ +GD E
Sbjct: 312 ETATVVQVDKD--EGDVSE 328
>Z69659-1|CAA93483.1| 329|Caenorhabditis elegans Hypothetical
protein F07C6.1 protein.
Length = 329
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = +3
Query: 336 VDKAGIVEYWTGPKHEYNFPKTVRFQSKLDTDLYDFVKNKTCPTALDF 479
VD + ++ Y P H Y+F K + L++D + CP DF
Sbjct: 150 VDNSDLLTYQENPYHAYHF-KCTTCKKVLESDARTIKDDLFCPRCFDF 196
>AC024778-2|AAF60566.2| 2325|Caenorhabditis elegans Neuronal igcam
protein 4 protein.
Length = 2325
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +3
Query: 216 KIHVYDGTQASGTPLHTFETLHQTAVAVIKYNPVFETAVSVDKAG 350
K Y+ SG+P + T + A+IK+NPV E + + D G
Sbjct: 1248 KARTYESVP-SGSPRNIVVTAEGSKAAIIKWNPVAELSTNGDVIG 1291
>Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical
protein E01G6.1 protein.
Length = 1391
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
Frame = -3
Query: 510 LSRPSFCRPARSPAPSDKSCSSRSRTGP---CRASTETSPS 397
LS P C P+ S P SC RTG C+ T T+ S
Sbjct: 28 LSAPVTCNPSISSCPDGYSCQFYERTGSSYCCQNPTPTAKS 68
>Z50863-3|CAA90735.1| 830|Caenorhabditis elegans Hypothetical
protein C14H10.3 protein.
Length = 830
Score = 28.3 bits (60), Expect = 7.2
Identities = 22/92 (23%), Positives = 37/92 (40%), Gaps = 1/92 (1%)
Frame = +3
Query: 108 DMINMISIDFEPYRGEWVHSAGDPISALAVSDRNTNKIHVYDGTQASGTPLHTFETLHQT 287
DMI+ I E W+H G I+AL + N +HV + P+ + + +
Sbjct: 324 DMISKILEIREKKAKFWLHITGQAIAALTFREPNNILVHVLSQVDSMTVPIALWLGI-PS 382
Query: 288 AVAVIKYNPVFETAVSV-DKAGIVEYWTGPKH 380
A V + PV S +K + +W +
Sbjct: 383 APVVTLHRPVEGYKASYREKLDTLPWWVASSY 414
>AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical
protein W07E6.2 protein.
Length = 473
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +3
Query: 477 FSPDGRKMASISLDRKVRVFHFLTGK 554
FSPD R +AS S D+ V+++ TGK
Sbjct: 368 FSPDTRYIASASFDKSVKLWCGRTGK 393
>Z81548-4|CAB04465.1| 916|Caenorhabditis elegans Hypothetical
protein F14F7.5 protein.
Length = 916
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = -3
Query: 486 PARSPAPSDKSCSSRSRTGPCRASTETSPS 397
P SPAPS++S S+ + GP R S+ +PS
Sbjct: 785 PLSSPAPSNQSPPSQPQPGP-RGSSPPAPS 813
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -3
Query: 486 PARSPAPSDKSCSSRSRTGPCRASTETSPS 397
P++S +P+ K SRS++ P A SPS
Sbjct: 323 PSQSKSPAPKRAKSRSKSPPAPARRRRSPS 352
>Z81503-5|CAB04114.1| 916|Caenorhabditis elegans Hypothetical
protein F14F7.5 protein.
Length = 916
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = -3
Query: 486 PARSPAPSDKSCSSRSRTGPCRASTETSPS 397
P SPAPS++S S+ + GP R S+ +PS
Sbjct: 785 PLSSPAPSNQSPPSQPQPGP-RGSSPPAPS 813
>AF039046-14|AAB94214.1| 388|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 54
protein.
Length = 388
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = -3
Query: 573 RRSPCAVCRSG-SGTLAPSCRGLSRPSFCRPARSPAPSDKSCSSRSRTGPC 424
++ P A C+S + + SC+ ++P+ +SP SCS ++ PC
Sbjct: 330 QQQPAAQCQSACQDSCSSSCQA-AQPATTACQQSPQSPQNSCSCQANYSPC 379
>AF024496-2|AAB70340.1| 1459|Caenorhabditis elegans Hypothetical
protein ZC178.2 protein.
Length = 1459
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = -3
Query: 513 GLSRPSFCRPARSPAPSDKSCSSRSRTGPCRASTETSPSWGNCIRASDPSS 361
G S + + +P PS + +S S PC + T+TS +SD ++
Sbjct: 453 GTSTMTVSSDSTTPGPSSTATNSASSETPCNSETQTSDGTFTMTVSSDSTT 503
>AC024757-3|AAF59448.2| 414|Caenorhabditis elegans Hypothetical
protein Y37E11AL.6 protein.
Length = 414
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -2
Query: 253 VPEACVPSYT*ILFVFLSETAKAEMGSPAECTHSPRY 143
+P A P +LF+ L +A+ E G P E H+P +
Sbjct: 2 LPSAPAPLAHFLLFLHLIHSARPEDGVPIETIHAPMF 38
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,974,307
Number of Sequences: 27780
Number of extensions: 408308
Number of successful extensions: 1758
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1754
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2077023564
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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