Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_FL5_M15
(855 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing f... 35 0.33
BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor proline... 35 0.33
BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein. 35 0.33
AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor proline... 35 0.33
BC004534-1|AAH04534.2| 634|Homo sapiens SFPQ protein protein. 34 0.76
DQ986374-1|ABJ15760.1| 447|Homo sapiens T-box transcription fac... 33 1.3
X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein. 31 4.0
S81243-1|AAB36006.1| 684|Homo sapiens CHN protein. 31 4.0
D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan rec... 31 4.0
AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfam... 31 4.0
AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfam... 31 4.0
AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfam... 31 4.0
AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfam... 31 4.0
AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfam... 31 4.0
AC080162-1|AAY14856.1| 635|Homo sapiens unknown protein. 31 5.3
AB007860-1|BAA23696.2| 1022|Homo sapiens KIAA0400 protein. 31 5.3
>X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing
factor protein.
Length = 707
Score = 35.1 bits (77), Expect = 0.33
Identities = 29/82 (35%), Positives = 34/82 (41%), Gaps = 3/82 (3%)
Frame = +1
Query: 583 RSRPYASSHPPLRSRLHQ-PDHQIPDSIHQPXPDLTSISINPLTPY*KEFAPGV--KPPL 753
+ +P PP + HQ P H P QP P S P+ APGV PP
Sbjct: 69 QQQPPPQQPPPQQPPPHQPPPHPQPHQQQQPPPP-PQDSSKPVVAQGPGPAPGVGSAPPA 127
Query: 754 SSEAPSAYLTPSSLGMAKGVSP 819
SS AP A TP + G G P
Sbjct: 128 SSSAPPA--TPPTSGAPPGSGP 147
>BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 35.1 bits (77), Expect = 0.33
Identities = 29/82 (35%), Positives = 34/82 (41%), Gaps = 3/82 (3%)
Frame = +1
Query: 583 RSRPYASSHPPLRSRLHQ-PDHQIPDSIHQPXPDLTSISINPLTPY*KEFAPGV--KPPL 753
+ +P PP + HQ P H P QP P S P+ APGV PP
Sbjct: 69 QQQPPPQQPPPQQPPPHQPPPHPQPHQQQQPPPP-PQDSSKPVVAQGPGPAPGVGSTPPA 127
Query: 754 SSEAPSAYLTPSSLGMAKGVSP 819
SS AP A TP + G G P
Sbjct: 128 SSSAPPA--TPPTSGAPPGSGP 147
>BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein.
Length = 525
Score = 35.1 bits (77), Expect = 0.33
Identities = 29/82 (35%), Positives = 34/82 (41%), Gaps = 3/82 (3%)
Frame = +1
Query: 583 RSRPYASSHPPLRSRLHQ-PDHQIPDSIHQPXPDLTSISINPLTPY*KEFAPGV--KPPL 753
+ +P PP + HQ P H P QP P S P+ APGV PP
Sbjct: 69 QQQPPPQQPPPQQPPPHQPPPHPQPHQQQQPPPP-PQDSSKPVVAQGPGPAPGVGSAPPA 127
Query: 754 SSEAPSAYLTPSSLGMAKGVSP 819
SS AP A TP + G G P
Sbjct: 128 SSSAPPA--TPPTSGAPPGSGP 147
>AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 35.1 bits (77), Expect = 0.33
Identities = 29/82 (35%), Positives = 34/82 (41%), Gaps = 3/82 (3%)
Frame = +1
Query: 583 RSRPYASSHPPLRSRLHQ-PDHQIPDSIHQPXPDLTSISINPLTPY*KEFAPGV--KPPL 753
+ +P PP + HQ P H P QP P S P+ APGV PP
Sbjct: 69 QQQPPPQQPPPQQPPPHQPPPHPQPHQQQQPPPP-PQDSSKPVVAQGPGPAPGVGSAPPA 127
Query: 754 SSEAPSAYLTPSSLGMAKGVSP 819
SS AP A TP + G G P
Sbjct: 128 SSSAPPA--TPPTSGAPPGSGP 147
>BC004534-1|AAH04534.2| 634|Homo sapiens SFPQ protein protein.
Length = 634
Score = 33.9 bits (74), Expect = 0.76
Identities = 28/73 (38%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
Frame = +1
Query: 610 PPLRSRLHQ-PDHQIPDSIHQPXPDLTSISINPLTPY*KEFAPGV--KPPLSSEAPSAYL 780
PP + HQ P H P QP P S P+ APGV PP SS AP A
Sbjct: 5 PPQQPPPHQPPPHPQPHQQQQPPPP-PQDSSKPVVAQGPGPAPGVGSAPPASSSAPPA-- 61
Query: 781 TPSSLGMAKGVSP 819
TP + G G P
Sbjct: 62 TPPTSGAPPGSGP 74
>DQ986374-1|ABJ15760.1| 447|Homo sapiens T-box transcription factor
TBX20 isoform A protein.
Length = 447
Score = 33.1 bits (72), Expect = 1.3
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +3
Query: 606 PPSPAISATSTRSSNPRFHTPTXPRLNIHFHQSPDAVLKGVR 731
P +P+ A+S + S P F + PR + +F Q P A ++G+R
Sbjct: 396 PLTPSAIASSMQGSGPTFPSFHMPRYHHYFQQGPYAAIQGLR 437
>X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein.
Length = 443
Score = 31.5 bits (68), Expect = 4.0
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 326 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 487
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>S81243-1|AAB36006.1| 684|Homo sapiens CHN protein.
Length = 684
Score = 31.5 bits (68), Expect = 4.0
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 326 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 487
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 93 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 144
>D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan
receptor protein.
Length = 626
Score = 31.5 bits (68), Expect = 4.0
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 326 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 487
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 443
Score = 31.5 bits (68), Expect = 4.0
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 326 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 487
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 4.0
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 326 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 487
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 4.0
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 326 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 487
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 4.0
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 326 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 487
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 4.0
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 326 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 487
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>AC080162-1|AAY14856.1| 635|Homo sapiens unknown protein.
Length = 635
Score = 31.1 bits (67), Expect = 5.3
Identities = 19/52 (36%), Positives = 25/52 (48%)
Frame = +1
Query: 652 PDSIHQPXPDLTSISINPLTPY*KEFAPGVKPPLSSEAPSAYLTPSSLGMAK 807
P ++H P P L S NPLTP P K P EA S P+ G+++
Sbjct: 453 PPAVHPPLPPLRVTSTNPLTP--TPPPPVAKTPSVMEALSQPSKPAPPGISQ 502
>AB007860-1|BAA23696.2| 1022|Homo sapiens KIAA0400 protein.
Length = 1022
Score = 31.1 bits (67), Expect = 5.3
Identities = 19/52 (36%), Positives = 25/52 (48%)
Frame = +1
Query: 652 PDSIHQPXPDLTSISINPLTPY*KEFAPGVKPPLSSEAPSAYLTPSSLGMAK 807
P ++H P P L S NPLTP P K P EA S P+ G+++
Sbjct: 840 PPAVHPPLPPLRVTSTNPLTP--TPPPPVAKTPSVMEALSQPSKPAPPGISQ 889
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,913,035
Number of Sequences: 237096
Number of extensions: 2686772
Number of successful extensions: 6506
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 6029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6494
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10872716010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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