Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP13_FL5_M02
         (904 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z37983-1|CAA86061.1|  276|Caenorhabditis elegans Hypothetical pr...   201   6e-52
U58760-7|AAK31463.1|  188|Caenorhabditis elegans Hypothetical pr...    36   0.040
Z81579-4|CAE17915.1|  212|Caenorhabditis elegans Hypothetical pr...    36   0.052
Z66499-4|CAA91301.1|  164|Caenorhabditis elegans Hypothetical pr...    36   0.052
U55854-7|AAK68158.1|  166|Caenorhabditis elegans Hypothetical pr...    36   0.052
U55854-6|AAK68161.1|  197|Caenorhabditis elegans Hypothetical pr...    36   0.052
Z81573-2|CAB04626.1|  294|Caenorhabditis elegans Hypothetical pr...    32   0.49 
AL031632-6|CAA21008.1|  338|Caenorhabditis elegans Hypothetical ...    29   6.0  

>Z37983-1|CAA86061.1|  276|Caenorhabditis elegans Hypothetical
           protein B0393.1 protein.
          Length = 276

 Score =  201 bits (490), Expect = 6e-52
 Identities = 93/144 (64%), Positives = 113/144 (78%)
 Frame = +3

Query: 111 MSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVL 290
           MSGG    AL EEDV K+LA   HLG+ N+NFQM+ YVYKRR DG ++IN+++TWEKL+L
Sbjct: 1   MSGGAAHSALTEEDVMKLLATQAHLGSTNLNFQMQQYVYKRRFDGPNIINVKKTWEKLLL 60

Query: 291 AARAVVAIENPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPR 470
           AARA+ A+ENPADV V+S+RP+ QRA+LKFAAHTGAT I GRF+PG  TNQIQ  F+EPR
Sbjct: 61  AARAIAAVENPADVVVVSARPYAQRALLKFAAHTGATAIFGRFSPGCLTNQIQKTFKEPR 120

Query: 471 LLIVLDPAQXXQXXTEASYVXXPV 542
           LL++ DP    Q  TEASYV  PV
Sbjct: 121 LLVISDPRIDHQAVTEASYVGVPV 144


>U58760-7|AAK31463.1|  188|Caenorhabditis elegans Hypothetical
           protein C27A2.5 protein.
          Length = 188

 Score = 35.9 bits (79), Expect = 0.040
 Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
 Frame = +2

Query: 290 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 412
           GC CC    +   C R   T  R+ CCT  C   R C   CG
Sbjct: 82  GCGCCCCRPKCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 123


>Z81579-4|CAE17915.1|  212|Caenorhabditis elegans Hypothetical
           protein R13H4.8 protein.
          Length = 212

 Score = 35.5 bits (78), Expect = 0.052
 Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
 Frame = +2

Query: 290 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 412
           GC CC        C R   T  R+ CCT  C   R C   CG
Sbjct: 83  GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 124


>Z66499-4|CAA91301.1|  164|Caenorhabditis elegans Hypothetical
           protein T01B7.8 protein.
          Length = 164

 Score = 35.5 bits (78), Expect = 0.052
 Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
 Frame = +2

Query: 290 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 412
           GC CC        C R   T  R+ CCT  C   R C   CG
Sbjct: 81  GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 122


>U55854-7|AAK68158.1|  166|Caenorhabditis elegans Hypothetical
           protein C04G6.10 protein.
          Length = 166

 Score = 35.5 bits (78), Expect = 0.052
 Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
 Frame = +2

Query: 290 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 412
           GC CC        C R   T  R+ CCT  C   R C   CG
Sbjct: 82  GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 123


>U55854-6|AAK68161.1|  197|Caenorhabditis elegans Hypothetical
           protein C04G6.7 protein.
          Length = 197

 Score = 35.5 bits (78), Expect = 0.052
 Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
 Frame = +2

Query: 290 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 412
           GC CC        C R   T  R+ CCT  C   R C   CG
Sbjct: 83  GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 124


>Z81573-2|CAB04626.1|  294|Caenorhabditis elegans Hypothetical
           protein M02G9.3 protein.
          Length = 294

 Score = 32.3 bits (70), Expect = 0.49
 Identities = 20/73 (27%), Positives = 29/73 (39%)
 Frame = +2

Query: 287 SGCSCCRSHREPR*CVRHLITALRSACCTEVCRAHRCYAYCGTFHTRCFY*PDPSCIP*T 466
           S  SCC S      C+   +   +S+C T +C+  +C   C    T       PSC    
Sbjct: 38  SSSSCCSSSSSNSYCIPVCMAQCQSSCTTPICQ-QQCSNQCNQQCTSITISSGPSCSSCQ 96

Query: 467 SSLDCIGPCXXPS 505
           S+  C   C  P+
Sbjct: 97  SA--CSSACTTPT 107


>AL031632-6|CAA21008.1|  338|Caenorhabditis elegans Hypothetical
           protein Y32B12B.6 protein.
          Length = 338

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 17/55 (30%), Positives = 26/55 (47%)
 Frame = +1

Query: 337 SSHHGPSVSVLY*SLPRTPVLRLLRDVSHQVLLLTRSKLHSVNLVS*LYWTLXXT 501
           S+HH   V +L  S P    L++ + +  +   + R K H +N  S  Y TL  T
Sbjct: 100 SAHHMNRVFLLLNSYPENSNLKIEQMLREETSFVARQKYHEMNWDSWYYITLVST 154


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,339,340
Number of Sequences: 27780
Number of extensions: 276597
Number of successful extensions: 609
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 591
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 609
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)