Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_FL5_L24
(865 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 358 2e-99
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 358 2e-99
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 358 2e-99
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 358 2e-99
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 260 1e-69
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 260 1e-69
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 151 8e-37
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 151 8e-37
AF003146-5|AAB54199.1| 299|Caenorhabditis elegans Hypothetical ... 30 1.9
AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal ne... 29 4.3
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 358 bits (881), Expect = 2e-99
Identities = 161/252 (63%), Positives = 192/252 (76%)
Frame = +2
Query: 59 HRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDR 238
HRKFSAPRHG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+
Sbjct: 3 HRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDK 62
Query: 239 PGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNW 418
PGSK+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 63 PGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNW 122
Query: 419 YXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRXKKAHIME 598
WQDE G+K IE DF K+ +YCS +RVIAHTQMK+L++R KKAH++E
Sbjct: 123 AKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVE 182
Query: 599 IQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDXMIDCIXXXXXXXXXXXXSRWHTXXLPR 778
IQ+NGGTIE KV WAREHLEK + VD+VFAQD MID I SRWHT LPR
Sbjct: 183 IQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPR 242
Query: 779 KNTRVLGKLPAL 814
K + L K+ +
Sbjct: 243 KTHKGLRKVACI 254
Score = 35.9 bits (79), Expect = 0.037
Identities = 16/23 (69%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Frame = +1
Query: 760 HKXXTP*K-HKGLRKVACIGXWH 825
H P K HKGLRKVACIG WH
Sbjct: 236 HTKKLPRKTHKGLRKVACIGAWH 258
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 358 bits (881), Expect = 2e-99
Identities = 161/252 (63%), Positives = 192/252 (76%)
Frame = +2
Query: 59 HRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDR 238
HRKFSAPRHG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+
Sbjct: 3 HRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDK 62
Query: 239 PGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNW 418
PGSK+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 63 PGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNW 122
Query: 419 YXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRXKKAHIME 598
WQDE G+K IE DF K+ +YCS +RVIAHTQMK+L++R KKAH++E
Sbjct: 123 AKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVE 182
Query: 599 IQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDXMIDCIXXXXXXXXXXXXSRWHTXXLPR 778
IQ+NGGTIE KV WAREHLEK + VD+VFAQD MID I SRWHT LPR
Sbjct: 183 IQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPR 242
Query: 779 KNTRVLGKLPAL 814
K + L K+ +
Sbjct: 243 KTHKGLRKVACI 254
Score = 35.9 bits (79), Expect = 0.037
Identities = 16/23 (69%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Frame = +1
Query: 760 HKXXTP*K-HKGLRKVACIGXWH 825
H P K HKGLRKVACIG WH
Sbjct: 236 HTKKLPRKTHKGLRKVACIGAWH 258
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 358 bits (881), Expect = 2e-99
Identities = 161/252 (63%), Positives = 192/252 (76%)
Frame = +2
Query: 59 HRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDR 238
HRKFSAPRHG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+
Sbjct: 3 HRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDK 62
Query: 239 PGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNW 418
PGSK+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 63 PGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNW 122
Query: 419 YXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRXKKAHIME 598
WQDE G+K IE DF K+ +YCS +RVIAHTQMK+L++R KKAH++E
Sbjct: 123 AKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVE 182
Query: 599 IQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDXMIDCIXXXXXXXXXXXXSRWHTXXLPR 778
IQ+NGGTIE KV WAREHLEK + VD+VFAQD MID I SRWHT LPR
Sbjct: 183 IQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPR 242
Query: 779 KNTRVLGKLPAL 814
K + L K+ +
Sbjct: 243 KTHKGLRKVACI 254
Score = 35.9 bits (79), Expect = 0.037
Identities = 16/23 (69%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Frame = +1
Query: 760 HKXXTP*K-HKGLRKVACIGXWH 825
H P K HKGLRKVACIG WH
Sbjct: 236 HTKKLPRKTHKGLRKVACIGAWH 258
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 358 bits (881), Expect = 2e-99
Identities = 161/252 (63%), Positives = 192/252 (76%)
Frame = +2
Query: 59 HRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDR 238
HRKFSAPRHG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+
Sbjct: 3 HRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDK 62
Query: 239 PGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNW 418
PGSK+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 63 PGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNW 122
Query: 419 YXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRXKKAHIME 598
WQDE G+K IE DF K+ +YCS +RVIAHTQMK+L++R KKAH++E
Sbjct: 123 AKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVE 182
Query: 599 IQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDXMIDCIXXXXXXXXXXXXSRWHTXXLPR 778
IQ+NGGTIE KV WAREHLEK + VD+VFAQD MID I SRWHT LPR
Sbjct: 183 IQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPR 242
Query: 779 KNTRVLGKLPAL 814
K + L K+ +
Sbjct: 243 KTHKGLRKVACI 254
Score = 35.9 bits (79), Expect = 0.037
Identities = 16/23 (69%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Frame = +1
Query: 760 HKXXTP*K-HKGLRKVACIGXWH 825
H P K HKGLRKVACIG WH
Sbjct: 236 HTKKLPRKTHKGLRKVACIGAWH 258
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 260 bits (636), Expect = 1e-69
Identities = 113/166 (68%), Positives = 133/166 (80%)
Frame = +2
Query: 59 HRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDR 238
HRKFSAPRHG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+
Sbjct: 3 HRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDK 62
Query: 239 PGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNW 418
PGSK+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 63 PGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNW 122
Query: 419 YXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQM 556
WQDE G+K IE DF K+ +YCS +RVIAHTQM
Sbjct: 123 AKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQM 168
Score = 35.9 bits (79), Expect = 0.037
Identities = 16/23 (69%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Frame = +1
Query: 760 HKXXTP*K-HKGLRKVACIGXWH 825
H P K HKGLRKVACIG WH
Sbjct: 188 HTKKLPRKTHKGLRKVACIGAWH 210
Score = 32.3 bits (70), Expect = 0.46
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = +2
Query: 680 VFAQDXMIDCIXXXXXXXXXXXXSRWHTXXLPRKNTRVLGKLPAL 814
V A MID I SRWHT LPRK + L K+ +
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACI 206
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 260 bits (636), Expect = 1e-69
Identities = 113/166 (68%), Positives = 133/166 (80%)
Frame = +2
Query: 59 HRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDR 238
HRKFSAPRHG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+
Sbjct: 3 HRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDK 62
Query: 239 PGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNW 418
PGSK+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 63 PGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNW 122
Query: 419 YXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQM 556
WQDE G+K IE DF K+ +YCS +RVIAHTQM
Sbjct: 123 AKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQM 168
Score = 35.9 bits (79), Expect = 0.037
Identities = 16/23 (69%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Frame = +1
Query: 760 HKXXTP*K-HKGLRKVACIGXWH 825
H P K HKGLRKVACIG WH
Sbjct: 188 HTKKLPRKTHKGLRKVACIGAWH 210
Score = 32.3 bits (70), Expect = 0.46
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = +2
Query: 680 VFAQDXMIDCIXXXXXXXXXXXXSRWHTXXLPRKNTRVLGKLPAL 814
V A MID I SRWHT LPRK + L K+ +
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACI 206
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 151 bits (365), Expect = 8e-37
Identities = 70/118 (59%), Positives = 85/118 (72%)
Frame = +2
Query: 461 WQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRXKKAHIMEIQLNGGTIEDKVKW 640
WQDE G+K IE DF K+ +YCS +RVIAHTQMK+L++R KKAH++EIQ+NGGTIE KV W
Sbjct: 39 WQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDW 98
Query: 641 AREHLEKPIPVDSVFAQDXMIDCIXXXXXXXXXXXXSRWHTXXLPRKNTRVLGKLPAL 814
AREHLEK + VD+VFAQD MID I SRWHT LPRK + L K+ +
Sbjct: 99 AREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACI 156
Score = 60.1 bits (139), Expect = 2e-09
Identities = 25/32 (78%), Positives = 28/32 (87%)
Frame = +2
Query: 59 HRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPK 154
HRKFSAPRHG MGF PKKRSR +RG++KAF K
Sbjct: 3 HRKFSAPRHGHMGFTPKKRSRTYRGRIKAFTK 34
Score = 35.9 bits (79), Expect = 0.037
Identities = 16/23 (69%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Frame = +1
Query: 760 HKXXTP*K-HKGLRKVACIGXWH 825
H P K HKGLRKVACIG WH
Sbjct: 138 HTKKLPRKTHKGLRKVACIGAWH 160
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 151 bits (365), Expect = 8e-37
Identities = 70/118 (59%), Positives = 85/118 (72%)
Frame = +2
Query: 461 WQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRXKKAHIMEIQLNGGTIEDKVKW 640
WQDE G+K IE DF K+ +YCS +RVIAHTQMK+L++R KKAH++EIQ+NGGTIE KV W
Sbjct: 39 WQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDW 98
Query: 641 AREHLEKPIPVDSVFAQDXMIDCIXXXXXXXXXXXXSRWHTXXLPRKNTRVLGKLPAL 814
AREHLEK + VD+VFAQD MID I SRWHT LPRK + L K+ +
Sbjct: 99 AREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACI 156
Score = 60.1 bits (139), Expect = 2e-09
Identities = 25/32 (78%), Positives = 28/32 (87%)
Frame = +2
Query: 59 HRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPK 154
HRKFSAPRHG MGF PKKRSR +RG++KAF K
Sbjct: 3 HRKFSAPRHGHMGFTPKKRSRTYRGRIKAFTK 34
Score = 35.9 bits (79), Expect = 0.037
Identities = 16/23 (69%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Frame = +1
Query: 760 HKXXTP*K-HKGLRKVACIGXWH 825
H P K HKGLRKVACIG WH
Sbjct: 138 HTKKLPRKTHKGLRKVACIGAWH 160
>AF003146-5|AAB54199.1| 299|Caenorhabditis elegans Hypothetical
protein F56F4.2 protein.
Length = 299
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +2
Query: 293 TPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWY 421
T P + GY++ G+R VW E S+ + KNW+
Sbjct: 201 TDPNGYFDIAGYVDQSSGVRGRFWVWHECFSQKYHKDPCKNWF 243
>AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal
neurexin-like protein 1 protein.
Length = 1655
Score = 29.1 bits (62), Expect = 4.3
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +1
Query: 274 GCHHHRDSSDGLCRCCWIH*DPSWTTRSVDCLGGAYV*RLSTSLLQKLVQMQEEGF 441
GC + G C W + DPS T + DC +Y ++ L + V M+ GF
Sbjct: 1160 GCSSITCLNGGHCSVAWANTDPSAATTTCDCSRTSYT--GASCSLDEGVHMERSGF 1213
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,788,711
Number of Sequences: 27780
Number of extensions: 419609
Number of successful extensions: 1053
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 983
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1047
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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