Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_FL5_L18
(1437 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 26 1.6
12_01_0442 + 3495333-3496484 25 1.7
09_01_0016 - 376742-376883,377973-378964 25 2.2
06_03_1178 + 28203466-28204590,28204745-28205652,28206189-28206258 31 2.2
06_03_0214 + 18067945-18068463,18068940-18069839,18069918-18070652 25 3.5
01_01_0892 + 7037384-7037795,7038447-7038962,7039507-7039593,703... 25 3.5
05_04_0395 - 20921606-20921869,20921971-20922112,20922206-209223... 25 3.5
01_05_0490 + 22672241-22674679 30 3.9
05_03_0001 - 7269231-7269436,7269536-7270100,7270600-7270821,727... 25 5.7
08_02_0839 + 21693348-21694853 26 6.0
10_06_0152 - 11280532-11281427,11281501-11281971,11282512-11282569 25 6.0
04_04_0708 - 27441373-27442611 29 6.8
04_03_0977 + 21381857-21383757,21384299-21384458,21384669-213847... 29 6.8
05_07_0031 - 27183252-27183317,27183542-27184282 26 8.2
07_01_0753 - 5799733-5799741,5799938-5800642 29 9.0
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 24 9.2
09_06_0107 + 20907560-20908491,20908511-20908625,20908967-209090... 26 9.7
11_01_0133 + 1121392-1122731,1123417-1123858 24 9.9
07_01_0674 + 5047503-5047646,5047808-5047901,5048743-5048828,504... 24 9.9
>03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 26.2 bits (55), Expect(2) = 1.6
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -2
Query: 1001 PPPPPPXPP 975
PPPPPP PP
Sbjct: 349 PPPPPPPPP 357
Score = 23.8 bits (49), Expect(2) = 1.6
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -2
Query: 998 PPPPPXPPXXI 966
PPPPP PP +
Sbjct: 373 PPPPPPPPPSV 383
>12_01_0442 + 3495333-3496484
Length = 383
Score = 25.4 bits (53), Expect(2) = 1.7
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +3
Query: 777 FXXPPPPPPP 806
F PPPPPPP
Sbjct: 68 FRPPPPPPPP 77
Score = 24.6 bits (51), Expect(2) = 1.7
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3
Query: 786 PPPPPPPXXXK 818
PPPPPPP K
Sbjct: 70 PPPPPPPPPAK 80
>09_01_0016 - 376742-376883,377973-378964
Length = 377
Score = 25.4 bits (53), Expect(2) = 2.2
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +3
Query: 777 FXXPPPPPPP 806
F PPPPPPP
Sbjct: 57 FVAPPPPPPP 66
Score = 24.2 bits (50), Expect(2) = 2.2
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +3
Query: 786 PPPPPPPXXXKKKK 827
PPPPPPP K+
Sbjct: 63 PPPPPPPPQQNGKE 76
>06_03_1178 + 28203466-28204590,28204745-28205652,28206189-28206258
Length = 700
Score = 31.1 bits (67), Expect = 2.2
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +3
Query: 756 GGXGXXXFXXPPPPPPP 806
GG G F PPPPPPP
Sbjct: 232 GGVGGPEFLPPPPPPPP 248
>06_03_0214 + 18067945-18068463,18068940-18069839,18069918-18070652
Length = 717
Score = 24.6 bits (51), Expect(2) = 3.5
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3
Query: 786 PPPPPPPXXXK 818
PPPPPPP K
Sbjct: 245 PPPPPPPQHSK 255
Score = 24.2 bits (50), Expect(2) = 3.5
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +3
Query: 765 GXXXFXXPPPPPPP 806
G PPPPPPP
Sbjct: 198 GSPPLPPPPPPPPP 211
>01_01_0892 +
7037384-7037795,7038447-7038962,7039507-7039593,
7039698-7039768,7040148-7040224,7040380-7040527,
7040973-7041134,7041374-7041694
Length = 597
Score = 24.6 bits (51), Expect(2) = 3.5
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3
Query: 786 PPPPPPPXXXK 818
PPPPPPP K
Sbjct: 127 PPPPPPPPPFK 137
Score = 24.2 bits (50), Expect(2) = 3.5
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +3
Query: 777 FXXPPPPPPP 806
+ PPPPPPP
Sbjct: 123 YGHPPPPPPP 132
>05_04_0395 -
20921606-20921869,20921971-20922112,20922206-20922330,
20922758-20923984
Length = 585
Score = 25.4 bits (53), Expect(2) = 3.5
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +3
Query: 777 FXXPPPPPPP 806
F PPPPPPP
Sbjct: 106 FDLPPPPPPP 115
Score = 23.4 bits (48), Expect(2) = 3.5
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +3
Query: 789 PPPPPPXXXKKKKXXK 836
PPPPPP K ++ K
Sbjct: 109 PPPPPPPPAKAEEPAK 124
>01_05_0490 + 22672241-22674679
Length = 812
Score = 30.3 bits (65), Expect = 3.9
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -2
Query: 1001 PPPPPPXPPXXIFXFFF 951
PPPPPP PP IF F
Sbjct: 607 PPPPPPPPPSSIFYNLF 623
>05_03_0001 -
7269231-7269436,7269536-7270100,7270600-7270821,
7270913-7271155,7271227-7271481,7272017-7272370,
7273082-7273164,7273250-7273630,7273874-7274027
Length = 820
Score = 25.0 bits (52), Expect(2) = 5.7
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -2
Query: 998 PPPPPXPPXXIFXFF 954
PPPPP PP F F
Sbjct: 4 PPPPPPPPRRDFPAF 18
Score = 23.0 bits (47), Expect(2) = 5.7
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -2
Query: 1001 PPPPPPXPP 975
P PPPP PP
Sbjct: 2 PAPPPPPPP 10
>08_02_0839 + 21693348-21694853
Length = 501
Score = 26.2 bits (55), Expect(2) = 6.0
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -3
Query: 1000 PPPPPPPXP 974
PPPPPPP P
Sbjct: 29 PPPPPPPQP 37
Score = 21.8 bits (44), Expect(2) = 6.0
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = -3
Query: 997 PPPPPPXPXXF 965
PPPPP P F
Sbjct: 44 PPPPPSSPVSF 54
>10_06_0152 - 11280532-11281427,11281501-11281971,11282512-11282569
Length = 474
Score = 25.4 bits (53), Expect(2) = 6.0
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +3
Query: 777 FXXPPPPPPP 806
F PPPPPPP
Sbjct: 319 FPPPPPPPPP 328
Score = 22.6 bits (46), Expect(2) = 6.0
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +3
Query: 786 PPPPPPPXXXKKKK 827
PPPP PP K+K
Sbjct: 326 PPPPVPPTANGKEK 339
>04_04_0708 - 27441373-27442611
Length = 412
Score = 29.5 bits (63), Expect = 6.8
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -3
Query: 1000 PPPPPPPXPXXFL 962
PPPPPPP P FL
Sbjct: 241 PPPPPPPPPPPFL 253
>04_03_0977 + 21381857-21383757,21384299-21384458,21384669-21384717,
21385117-21385169
Length = 720
Score = 29.5 bits (63), Expect = 6.8
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -3
Query: 1000 PPPPPPPXPXXFLXFF 953
PPPPPPP P L F+
Sbjct: 102 PPPPPPPPPQGTLAFY 117
>05_07_0031 - 27183252-27183317,27183542-27184282
Length = 268
Score = 26.2 bits (55), Expect(2) = 8.2
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -3
Query: 1000 PPPPPPPXP 974
PPPPPPP P
Sbjct: 120 PPPPPPPPP 128
Score = 21.4 bits (43), Expect(2) = 8.2
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = -3
Query: 994 PPPPPXPXXFL 962
PPPPP P L
Sbjct: 150 PPPPPPPPPLL 160
>07_01_0753 - 5799733-5799741,5799938-5800642
Length = 237
Score = 29.1 bits (62), Expect = 9.0
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -2
Query: 1001 PPPPPPXPPXXIF 963
PPPPPP PP +F
Sbjct: 46 PPPPPPPPPTLVF 58
>10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 23.8 bits (49), Expect(2) = 9.2
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -3
Query: 1000 PPPPPPP 980
PPPPPPP
Sbjct: 666 PPPPPPP 672
Score = 23.4 bits (48), Expect(2) = 9.2
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -3
Query: 997 PPPPPPXP 974
PPPPPP P
Sbjct: 689 PPPPPPPP 696
>09_06_0107 + 20907560-20908491,20908511-20908625,20908967-20909058,
20909293-20909556,20910714-20911494
Length = 727
Score = 26.2 bits (55), Expect(2) = 9.7
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -2
Query: 1001 PPPPPPXPP 975
PPPPPP PP
Sbjct: 83 PPPPPPPPP 91
Score = 21.0 bits (42), Expect(2) = 9.7
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -2
Query: 998 PPPPPXPPXXIFXFF 954
PPPPP P + F+
Sbjct: 119 PPPPPPPMPSSWDFW 133
>11_01_0133 + 1121392-1122731,1123417-1123858
Length = 593
Score = 23.8 bits (49), Expect(2) = 9.9
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -3
Query: 1000 PPPPPPP 980
PPPPPPP
Sbjct: 134 PPPPPPP 140
Score = 23.4 bits (48), Expect(2) = 9.9
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -3
Query: 997 PPPPPPXP 974
PPPPPP P
Sbjct: 164 PPPPPPQP 171
>07_01_0674 + 5047503-5047646,5047808-5047901,5048743-5048828,
5049380-5049429,5049517-5049586,5049668-5049749,
5049867-5050267,5050414-5050941,5051823-5052044
Length = 558
Score = 23.8 bits (49), Expect(2) = 9.9
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -3
Query: 1000 PPPPPPP 980
PPPPPPP
Sbjct: 251 PPPPPPP 257
Score = 23.4 bits (48), Expect(2) = 9.9
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -3
Query: 997 PPPPPPXP 974
PPPPPP P
Sbjct: 273 PPPPPPRP 280
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,905,208
Number of Sequences: 37544
Number of extensions: 469069
Number of successful extensions: 39080
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 3265
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18998
length of database: 14,793,348
effective HSP length: 85
effective length of database: 11,602,108
effective search space used: 4559628444
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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