Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP13_FL5_L18
         (1437 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-2110|AAN09656.1|  968|Drosophila melanogaster CG15028-P...    27   0.43 
AE014298-2111|AAF48430.1|  858|Drosophila melanogaster CG15028-P...    27   0.44 

>AE014298-2110|AAN09656.1|  968|Drosophila melanogaster CG15028-PB,
           isoform B protein.
          Length = 968

 Score = 27.5 bits (58), Expect(2) = 0.43
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = +3

Query: 756 GGXGXXXFXXPPPPPPP 806
           GG G      PPPPPPP
Sbjct: 626 GGGGAVPRPPPPPPPPP 642



 Score = 25.4 bits (53), Expect(2) = 0.43
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +3

Query: 786 PPPPPPPXXXKK 821
           PPPPPPP   +K
Sbjct: 634 PPPPPPPPPPRK 645


>AE014298-2111|AAF48430.1|  858|Drosophila melanogaster CG15028-PA,
           isoform A protein.
          Length = 858

 Score = 27.5 bits (58), Expect(2) = 0.44
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = +3

Query: 756 GGXGXXXFXXPPPPPPP 806
           GG G      PPPPPPP
Sbjct: 516 GGGGAVPRPPPPPPPPP 532



 Score = 25.4 bits (53), Expect(2) = 0.44
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +3

Query: 786 PPPPPPPXXXKK 821
           PPPPPPP   +K
Sbjct: 524 PPPPPPPPPPRK 535


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,748,882
Number of Sequences: 53049
Number of extensions: 606988
Number of successful extensions: 36149
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18523
length of database: 24,988,368
effective HSP length: 88
effective length of database: 20,320,056
effective search space used: 7924821840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)