Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_FL5_L13
(877 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical p... 30 1.9
Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical p... 30 2.5
Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical pr... 30 2.5
AL023828-4|CAA19469.1| 462|Caenorhabditis elegans Hypothetical ... 30 2.5
AL023828-3|CAA19468.1| 572|Caenorhabditis elegans Hypothetical ... 30 2.5
AL023828-2|CAA19449.1| 570|Caenorhabditis elegans Hypothetical ... 30 2.5
AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein. 30 2.5
AL132862-11|CAB60541.1| 396|Caenorhabditis elegans Hypothetical... 29 3.3
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 29 3.3
U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly glu... 29 4.4
U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly glu... 29 4.4
>Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical
protein T20D3.11 protein.
Length = 1843
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 519 PYASSHPPLRSRLHQPDHQIPDS 587
P +S HPPL S H +H PD+
Sbjct: 66 PTSSHHPPLNSSSHHSNHNYPDT 88
>Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical
protein C02F4.1 protein.
Length = 1781
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Frame = +1
Query: 484 PSSSRITIGGLALMHQATLPCDLGYINPIIKSPIPYTNHPRLNIHFHQSPE-RRTKKEFA 660
P I + L+ + L CD + + K P ++ N+H+ P+ RRT KE
Sbjct: 514 PEKGPFAIAHVQLIRSSALLCDGEHDLAVYKIDNPGSHFDESNVHYMNLPDTRRTLKESI 573
Query: 661 PGLKP 675
KP
Sbjct: 574 GSAKP 578
>Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical
protein C02F4.1 protein.
Length = 1781
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Frame = +1
Query: 484 PSSSRITIGGLALMHQATLPCDLGYINPIIKSPIPYTNHPRLNIHFHQSPE-RRTKKEFA 660
P I + L+ + L CD + + K P ++ N+H+ P+ RRT KE
Sbjct: 514 PEKGPFAIAHVQLIRSSALLCDGEHDLAVYKIDNPGSHFDESNVHYMNLPDTRRTLKESI 573
Query: 661 PGLKP 675
KP
Sbjct: 574 GSAKP 578
>AL023828-4|CAA19469.1| 462|Caenorhabditis elegans Hypothetical
protein Y17G7B.2c protein.
Length = 462
Score = 29.9 bits (64), Expect = 2.5
Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Frame = +1
Query: 415 PVTVDLCWTTADVTVEGVNVLATPSSSRITIGG-LALMHQATLPCDLGYINPIIKSPIPY 591
P D AD+ V VLAT S+ R+ G L+ H +P D Y++ +K I
Sbjct: 75 PTAEDWKAKKADLVQMCVTVLATLSAERLKADGKLSAEH---VPEDFTYLS--LKDEIV- 128
Query: 592 TNHPRLNIHFHQSPERRTKKEFAPGLKPPLVIRXSISVSH 711
P +N +++ + KKE+ L P L+ +I V H
Sbjct: 129 ---PYMNENWYMLTAIKQKKEWHQNLAPTLLKEKNIFVQH 165
>AL023828-3|CAA19468.1| 572|Caenorhabditis elegans Hypothetical
protein Y17G7B.2b protein.
Length = 572
Score = 29.9 bits (64), Expect = 2.5
Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Frame = +1
Query: 415 PVTVDLCWTTADVTVEGVNVLATPSSSRITIGG-LALMHQATLPCDLGYINPIIKSPIPY 591
P D AD+ V VLAT S+ R+ G L+ H +P D Y++ +K I
Sbjct: 77 PTAEDWKAKKADLVQMCVTVLATLSAERLKADGKLSAEH---VPEDFTYLS--LKDEIV- 130
Query: 592 TNHPRLNIHFHQSPERRTKKEFAPGLKPPLVIRXSISVSH 711
P +N +++ + KKE+ L P L+ +I V H
Sbjct: 131 ---PYMNENWYMLTAIKQKKEWHQNLAPTLLKEKNIFVQH 167
>AL023828-2|CAA19449.1| 570|Caenorhabditis elegans Hypothetical
protein Y17G7B.2a protein.
Length = 570
Score = 29.9 bits (64), Expect = 2.5
Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Frame = +1
Query: 415 PVTVDLCWTTADVTVEGVNVLATPSSSRITIGG-LALMHQATLPCDLGYINPIIKSPIPY 591
P D AD+ V VLAT S+ R+ G L+ H +P D Y++ +K I
Sbjct: 75 PTAEDWKAKKADLVQMCVTVLATLSAERLKADGKLSAEH---VPEDFTYLS--LKDEIV- 128
Query: 592 TNHPRLNIHFHQSPERRTKKEFAPGLKPPLVIRXSISVSH 711
P +N +++ + KKE+ L P L+ +I V H
Sbjct: 129 ---PYMNENWYMLTAIKQKKEWHQNLAPTLLKEKNIFVQH 165
>AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein.
Length = 1781
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Frame = +1
Query: 484 PSSSRITIGGLALMHQATLPCDLGYINPIIKSPIPYTNHPRLNIHFHQSPE-RRTKKEFA 660
P I + L+ + L CD + + K P ++ N+H+ P+ RRT KE
Sbjct: 514 PEKGPFAIAHVQLIRSSALLCDGEHDLAVYKIDNPGSHFDESNVHYMNLPDTRRTLKESI 573
Query: 661 PGLKP 675
KP
Sbjct: 574 GSAKP 578
>AL132862-11|CAB60541.1| 396|Caenorhabditis elegans Hypothetical
protein Y73F8A.16 protein.
Length = 396
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRD 357
F L F++TG E KS V + S+ +I GYR+
Sbjct: 37 FPELNFNITGLEEKSRYVVLLSIEKYDNIRYGYRN 71
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 29.5 bits (63), Expect = 3.3
Identities = 20/84 (23%), Positives = 32/84 (38%)
Frame = +2
Query: 533 PPSPAISATSTRSSNPRFHTPTTPDLTSISINPLNAVLKXXXXXXXXXXXXXXAPSAYLT 712
P S I++TS+ S+ P + T T + + V +PS + T
Sbjct: 695 PDSTIITSTSSTSTRPGTSSTATDSPTMDDTSKTSTVTSEGTTLSIESTESSASPSDFTT 754
Query: 713 PSSLGMAKGVSPPLFQVNDESQAS 784
P +G VS Q + S +S
Sbjct: 755 PDFIGFTSSVSRTSEQYSSSSPSS 778
>U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform a
protein.
Length = 1081
Score = 29.1 bits (62), Expect = 4.4
Identities = 25/69 (36%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
Frame = +3
Query: 558 HQPDH-QIPDSIHQPPQT*HPFPSIP----*TPY*KGVRAGVKASVGHQXLHQRISPPRH 722
HQP QIP S +QP Q H P +P P+ VR A+ Q QRI P+H
Sbjct: 150 HQPTAGQIPQSSNQPAQQTHNVPRMPQPLQQVPHPSPVRGSHPAAQQVQNAPQRI--PQH 207
Query: 723 WAWLKGFRP 749
+G P
Sbjct: 208 VPMPQGVAP 216
>U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform b
protein.
Length = 1647
Score = 29.1 bits (62), Expect = 4.4
Identities = 25/69 (36%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
Frame = +3
Query: 558 HQPDH-QIPDSIHQPPQT*HPFPSIP----*TPY*KGVRAGVKASVGHQXLHQRISPPRH 722
HQP QIP S +QP Q H P +P P+ VR A+ Q QRI P+H
Sbjct: 150 HQPTAGQIPQSSNQPAQQTHNVPRMPQPLQQVPHPSPVRGSHPAAQQVQNAPQRI--PQH 207
Query: 723 WAWLKGFRP 749
+G P
Sbjct: 208 VPMPQGVAP 216
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,297,254
Number of Sequences: 27780
Number of extensions: 380618
Number of successful extensions: 1216
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1211
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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