Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_FL5_L11
(967 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 31 1.2
Z81125-3|CAB03384.1| 790|Caenorhabditis elegans Hypothetical pr... 25 1.9
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 27 2.5
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 29 6.5
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 29 6.5
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 29 6.5
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 29 6.5
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 28 8.7
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 28 8.7
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 28 8.7
U58753-8|AAC24439.1| 633|Caenorhabditis elegans Hypothetical pr... 28 8.7
U58753-7|AAC24433.1| 581|Caenorhabditis elegans Hypothetical pr... 28 8.7
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 28 8.7
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 28 8.7
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 28 8.7
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 28 8.7
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 28 8.7
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 28 8.7
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 28 8.7
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 28 8.7
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 28 8.7
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 28 8.7
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 23 8.9
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 23 8.9
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +2
Query: 659 GGGGXXXXXXXXXXXXXXXPPXXXXXCXXXXPPPPPPPP 775
GGGG PP C PPPPPPPP
Sbjct: 24 GGGGGGGGCAPAAPACAPPPPPM---CGCAPPPPPPPPP 59
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +2
Query: 662 GGGXXXXXXXXXXXXXXXPPXXXXXCXXXXPPPPPPP 772
GGG PP C PPPPPPP
Sbjct: 24 GGGGGGGGCAPAAPACAPPPPPMCGCAPPPPPPPPPP 60
Score = 28.3 bits (60), Expect = 8.7
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 715 PPXXXXXXXXXXPPPPPPPP 774
PP PPPPPPPP
Sbjct: 41 PPPPPMCGCAPPPPPPPPPP 60
>Z81125-3|CAB03384.1| 790|Caenorhabditis elegans Hypothetical
protein T22A3.5 protein.
Length = 790
Score = 25.4 bits (53), Expect(2) = 1.9
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +1
Query: 715 PPXXXXXXXXXXPPPPPPP 771
PP PPPPPPP
Sbjct: 738 PPLMHPTFSTSAPPPPPPP 756
Score = 23.4 bits (48), Expect(2) = 1.9
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 751 PPPPPPPP 774
PPPPPP P
Sbjct: 751 PPPPPPQP 758
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 26.6 bits (56), Expect(2) = 2.5
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 751 PPPPPPPP 774
PPPPPPPP
Sbjct: 578 PPPPPPPP 585
Score = 21.8 bits (44), Expect(2) = 2.5
Identities = 8/19 (42%), Positives = 8/19 (42%)
Frame = +1
Query: 715 PPXXXXXXXXXXPPPPPPP 771
PP PPPPPP
Sbjct: 538 PPPPPPVGMANGGPPPPPP 556
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = -2
Query: 774 GGGGGGGGXXXXXXXXXXGGXXXXXXXXXXXXXXXPPPP 658
GGGGGGGG GG PPPP
Sbjct: 274 GGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPPPP 312
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = -2
Query: 774 GGGGGGGGXXXXXXXXXXGGXXXXXXXXXXXXXXXPPPP 658
GGGGGGGG GG PPPP
Sbjct: 274 GGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPPPP 312
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 28.7 bits (61), Expect = 6.5
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +2
Query: 716 PPXXXXXCXXXXPPPPPPPP 775
PP PPPPPPPP
Sbjct: 349 PPIISPPAPPPPPPPPPPPP 368
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 28.7 bits (61), Expect = 6.5
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +2
Query: 716 PPXXXXXCXXXXPPPPPPPP 775
PP PPPPPPPP
Sbjct: 237 PPLPPVGAGAPPPPPPPPPP 256
Score = 28.3 bits (60), Expect = 8.7
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +2
Query: 716 PPXXXXXCXXXXPPPPPPPP 775
PP PPPPPPPP
Sbjct: 235 PPPPLPPVGAGAPPPPPPPP 254
Score = 28.3 bits (60), Expect = 8.7
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 715 PPXXXXXXXXXXPPPPPPPP 774
PP PPPPPPPP
Sbjct: 236 PPPLPPVGAGAPPPPPPPPP 255
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 28.7 bits (61), Expect = 6.5
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +2
Query: 716 PPXXXXXCXXXXPPPPPPPP 775
PP PPPPPPPP
Sbjct: 223 PPLPPVGAGAPPPPPPPPPP 242
Score = 28.3 bits (60), Expect = 8.7
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +2
Query: 716 PPXXXXXCXXXXPPPPPPPP 775
PP PPPPPPPP
Sbjct: 221 PPPPLPPVGAGAPPPPPPPP 240
Score = 28.3 bits (60), Expect = 8.7
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 715 PPXXXXXXXXXXPPPPPPPP 774
PP PPPPPPPP
Sbjct: 222 PPPLPPVGAGAPPPPPPPPP 241
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 28.7 bits (61), Expect = 6.5
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +2
Query: 716 PPXXXXXCXXXXPPPPPPPP 775
PP PPPPPPPP
Sbjct: 223 PPLPPVGAGAPPPPPPPPPP 242
Score = 28.3 bits (60), Expect = 8.7
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +2
Query: 716 PPXXXXXCXXXXPPPPPPPP 775
PP PPPPPPPP
Sbjct: 221 PPPPLPPVGAGAPPPPPPPP 240
Score = 28.3 bits (60), Expect = 8.7
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 715 PPXXXXXXXXXXPPPPPPPP 774
PP PPPPPPPP
Sbjct: 222 PPPLPPVGAGAPPPPPPPPP 241
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 28.3 bits (60), Expect = 8.7
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 715 PPXXXXXXXXXXPPPPPPPP 774
PP PPPPPPPP
Sbjct: 493 PPLPPIATPSSVPPPPPPPP 512
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 28.3 bits (60), Expect = 8.7
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 715 PPXXXXXXXXXXPPPPPPPP 774
PP PPPPPPPP
Sbjct: 796 PPPPLPPISSGAPPPPPPPP 815
Score = 28.3 bits (60), Expect = 8.7
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 715 PPXXXXXXXXXXPPPPPPPP 774
PP PPPPPPPP
Sbjct: 797 PPPLPPISSGAPPPPPPPPP 816
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 28.3 bits (60), Expect = 8.7
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 715 PPXXXXXXXXXXPPPPPPPP 774
PP PPPPPPPP
Sbjct: 796 PPPPLPPISSGAPPPPPPPP 815
Score = 28.3 bits (60), Expect = 8.7
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 715 PPXXXXXXXXXXPPPPPPPP 774
PP PPPPPPPP
Sbjct: 797 PPPLPPISSGAPPPPPPPPP 816
>U58753-8|AAC24439.1| 633|Caenorhabditis elegans Hypothetical
protein W03B1.9 protein.
Length = 633
Score = 28.3 bits (60), Expect = 8.7
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 715 PPXXXXXXXXXXPPPPPPPP 774
PP PPPPPPPP
Sbjct: 434 PPLQVGLVGRVPPPPPPPPP 453
>U58753-7|AAC24433.1| 581|Caenorhabditis elegans Hypothetical
protein W03B1.5 protein.
Length = 581
Score = 28.3 bits (60), Expect = 8.7
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 715 PPXXXXXXXXXXPPPPPPPP 774
PP PPPPPPPP
Sbjct: 382 PPLQVGLVGRVPPPPPPPPP 401
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 28.3 bits (60), Expect = 8.7
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 715 PPXXXXXXXXXXPPPPPPPP 774
PP PPPPPPPP
Sbjct: 637 PPMGLPAVGAGAPPPPPPPP 656
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 28.3 bits (60), Expect = 8.7
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 715 PPXXXXXXXXXXPPPPPPPP 774
PP PPPPPPPP
Sbjct: 463 PPMGLPAVGAGAPPPPPPPP 482
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 28.3 bits (60), Expect = 8.7
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 715 PPXXXXXXXXXXPPPPPPPP 774
PP PPPPPPPP
Sbjct: 52 PPQFCPPPPMCPPPPPPPPP 71
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.3 bits (60), Expect = 8.7
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 715 PPXXXXXXXXXXPPPPPPPP 774
PP PPPPPPPP
Sbjct: 746 PPPGGLPPISGGPPPPPPPP 765
Score = 28.3 bits (60), Expect = 8.7
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 715 PPXXXXXXXXXXPPPPPPPP 774
PP PPPPPPPP
Sbjct: 758 PPPPPPPPGGCPPPPPPPPP 777
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.3 bits (60), Expect = 8.7
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 715 PPXXXXXXXXXXPPPPPPPP 774
PP PPPPPPPP
Sbjct: 746 PPPGGLPPISGGPPPPPPPP 765
Score = 28.3 bits (60), Expect = 8.7
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 715 PPXXXXXXXXXXPPPPPPPP 774
PP PPPPPPPP
Sbjct: 758 PPPPPPPPGGCPPPPPPPPP 777
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 28.3 bits (60), Expect = 8.7
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 715 PPXXXXXXXXXXPPPPPPPP 774
PP PPPPPPPP
Sbjct: 500 PPLPPIATPSSVPPPPPPPP 519
Score = 28.3 bits (60), Expect = 8.7
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 715 PPXXXXXXXXXXPPPPPPPP 774
PP PPPPPPPP
Sbjct: 503 PPIATPSSVPPPPPPPPPPP 522
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 28.3 bits (60), Expect = 8.7
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 715 PPXXXXXXXXXXPPPPPPPP 774
PP PPPPPPPP
Sbjct: 72 PPPPLISILQQAPPPPPPPP 91
Score = 28.3 bits (60), Expect = 8.7
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 715 PPXXXXXXXXXXPPPPPPPP 774
PP PPPPPPPP
Sbjct: 73 PPPLISILQQAPPPPPPPPP 92
Score = 28.3 bits (60), Expect = 8.7
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 715 PPXXXXXXXXXXPPPPPPPP 774
PP PPPPPPPP
Sbjct: 74 PPLISILQQAPPPPPPPPPP 93
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.3 bits (60), Expect = 8.7
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 715 PPXXXXXXXXXXPPPPPPPP 774
PP PPPPPPPP
Sbjct: 329 PPPGGLPPISGGPPPPPPPP 348
Score = 28.3 bits (60), Expect = 8.7
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 715 PPXXXXXXXXXXPPPPPPPP 774
PP PPPPPPPP
Sbjct: 341 PPPPPPPPGGCPPPPPPPPP 360
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.3 bits (60), Expect = 8.7
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 715 PPXXXXXXXXXXPPPPPPPP 774
PP PPPPPPPP
Sbjct: 1344 PPPPPSDDLTPVPPPPPPPP 1363
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.3 bits (60), Expect = 8.7
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 715 PPXXXXXXXXXXPPPPPPPP 774
PP PPPPPPPP
Sbjct: 564 PPPPLPQNLSGAPPPPPPPP 583
Score = 28.3 bits (60), Expect = 8.7
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 715 PPXXXXXXXXXXPPPPPPPP 774
PP PPPPPPPP
Sbjct: 565 PPPLPQNLSGAPPPPPPPPP 584
Score = 28.3 bits (60), Expect = 8.7
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 715 PPXXXXXXXXXXPPPPPPPP 774
PP PPPPPPPP
Sbjct: 577 PPPPPPPPMLGGPPPPPPPP 596
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 22.6 bits (46), Expect(3) = 8.9
Identities = 8/18 (44%), Positives = 8/18 (44%)
Frame = +1
Query: 715 PPXXXXXXXXXXPPPPPP 768
PP PPPPPP
Sbjct: 297 PPPPPSSGMWPPPPPPPP 314
Score = 21.0 bits (42), Expect(3) = 8.9
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +1
Query: 754 PPPPPP 771
PPPPPP
Sbjct: 327 PPPPPP 332
Score = 21.0 bits (42), Expect(3) = 8.9
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +1
Query: 757 PPPPPP 774
PPPPPP
Sbjct: 344 PPPPPP 349
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 22.6 bits (46), Expect(3) = 8.9
Identities = 8/18 (44%), Positives = 8/18 (44%)
Frame = +1
Query: 715 PPXXXXXXXXXXPPPPPP 768
PP PPPPPP
Sbjct: 287 PPPPPSSGMWPPPPPPPP 304
Score = 21.0 bits (42), Expect(3) = 8.9
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +1
Query: 754 PPPPPP 771
PPPPPP
Sbjct: 317 PPPPPP 322
Score = 21.0 bits (42), Expect(3) = 8.9
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +1
Query: 757 PPPPPP 774
PPPPPP
Sbjct: 334 PPPPPP 339
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,727,402
Number of Sequences: 27780
Number of extensions: 163802
Number of successful extensions: 6967
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 573
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1773
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2500474882
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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