Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_FL5_L10
(852 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0822 + 28352941-28353825,28353863-28354016,28354714-283547... 32 0.50
07_03_0600 + 19866757-19867218,19867920-19868429 32 0.67
04_04_1085 - 30719921-30719960,30720206-30720351,30720469-307205... 31 1.2
04_04_0146 + 23106325-23108154 31 1.2
01_06_1377 + 36764461-36765339 31 1.2
07_03_1136 + 24218601-24218734,24218769-24219906 31 1.5
07_01_0568 - 4216898-4216911,4216997-4217024,4217265-4217335,421... 31 1.5
03_02_0045 - 5251234-5251305,5251362-5251419,5252256-5252539,525... 31 1.5
08_02_0178 - 13853847-13854416 30 2.0
06_03_0310 - 19453047-19453160,19453240-19453338,19453441-194535... 30 2.0
02_05_0224 + 26948263-26948520,26948831-26948907,26949597-269496... 30 2.7
06_03_1501 + 30612643-30613310,30613396-30613501,30613732-306139... 29 3.6
04_03_0884 + 20543084-20543638 29 3.6
03_02_0254 + 6862762-6863663,6863994-6864241,6864323-6864465,686... 29 4.7
11_01_0315 - 2347254-2347345,2347485-2347895,2348182-2349633,234... 29 6.2
09_04_0379 - 17094540-17094868,17095354-17095717 29 6.2
09_01_0066 - 978018-978500,978588-979034,979113-979412,979521-97... 29 6.2
07_03_1285 + 25477542-25477625,25477776-25477832,25477973-254780... 29 6.2
03_05_1045 - 29914581-29914829,29914840-29916083,29919055-299191... 29 6.2
02_01_0189 - 1273313-1274157,1274595-1275549 29 6.2
07_01_0217 + 1620625-1621419,1621982-1622152,1622581-1622865,162... 28 8.2
04_03_1028 - 21827961-21827972,21828018-21828112,21828286-218283... 28 8.2
>04_04_0822 +
28352941-28353825,28353863-28354016,28354714-28354754,
28355060-28355310,28355411-28355591,28356138-28356323,
28356396-28356569,28356992-28357150,28357424-28357501,
28357612-28357748,28357980-28358044,28358115-28358148,
28358216-28358372,28359135-28359196,28360041-28360118,
28360940-28361042
Length = 914
Score = 32.3 bits (70), Expect = 0.50
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -2
Query: 173 AGRRVRQAARPRLQHGPP-RVEPPRSNYTFAGAPFPPRAEVA 51
AG+ R RP+ QH PP R PPR ++ + P A V+
Sbjct: 83 AGKSTRVLNRPQRQHSPPGRALPPRESFRYNPKPAKAAAAVS 124
>07_03_0600 + 19866757-19867218,19867920-19868429
Length = 323
Score = 31.9 bits (69), Expect = 0.67
Identities = 24/85 (28%), Positives = 31/85 (36%), Gaps = 1/85 (1%)
Frame = -2
Query: 293 QVPAETTMAGKHLR*PEGEASAVAAHPVRENRADRLDGSEAGRRVRQAARPRL-QHGPPR 117
Q P T G H P + S A P + + + +Q P Q GPP
Sbjct: 3 QPPPPTMNGGHHAAPPPPQVSG--APPPPHGHYQQQPPPQPYCQQQQPLPPHYYQAGPPH 60
Query: 116 VEPPRSNYTFAGAPFPPRAEVATPP 42
PP+ G P PP + A PP
Sbjct: 61 APPPQQPPAMWGQPPPPPPQYAPPP 85
>04_04_1085 -
30719921-30719960,30720206-30720351,30720469-30720546,
30720649-30720715,30720948-30721090,30721504-30721535,
30721769-30722168,30722540-30722601,30722716-30722892,
30723078-30723201,30723590-30723760
Length = 479
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +1
Query: 397 TSNAPPSSRSLERTSRCRASWLRCSAATRPG 489
+S APPS+ +L R R A+ +RCS A PG
Sbjct: 13 SSAAPPSAAALRRPRRRCATPVRCSLAAAPG 43
>04_04_0146 + 23106325-23108154
Length = 609
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = -2
Query: 167 RRVRQAARPRLQHG-PPRVEPPRSNYTFAGAPFPPRAEVATPPVIGSERLRLQVP 6
R +R RPR P + PP +A P PP+A A P ++ + + L +P
Sbjct: 3 RALRLRHRPRRPPPVPAQAPPPSPRPWYAAPPPPPQAAAADPLLVAASEVALALP 57
>01_06_1377 + 36764461-36765339
Length = 292
Score = 31.1 bits (67), Expect = 1.2
Identities = 27/77 (35%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Frame = -2
Query: 248 PEGEASAVAAHPVRENRADRLDGSEAGR-RVRQAARPRLQHGPPRVEPPRSNYTFAGAPF 72
P+ ASA+ P+ R G G+ R+R A R R P PP S+ + P
Sbjct: 121 PDSPASALITLPLL-----RPSGRPQGKLRIRLALRERSPPPPEPQYPPPSSSPYYFPPP 175
Query: 71 PPRAEVA-TPPVIGSER 24
PP A A PP GSE+
Sbjct: 176 PPPAYSAPPPPQYGSEQ 192
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = +2
Query: 584 PSSRGPEAGIRPYVPXLRGGGASPRXKVXGAXXXGVKAXP 703
P G G RP P GGG +PR + G G A P
Sbjct: 121 PPGAGGGGGARPPAPGGGGGGGAPRRVLGGGGGGGALARP 160
>07_01_0568 -
4216898-4216911,4216997-4217024,4217265-4217335,
4218026-4218140,4218245-4218314,4218552-4218646,
4219320-4219379,4219476-4219547,4219676-4219819
Length = 222
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -2
Query: 116 VEPPRSNYTFAGAPFPPRAEVATPP 42
+ PP + TFAGAP PP E PP
Sbjct: 2 ITPPVAGDTFAGAPPPPSQEEDAPP 26
>03_02_0045 -
5251234-5251305,5251362-5251419,5252256-5252539,
5252836-5253019,5253564-5253814,5253921-5254024,
5254143-5254281
Length = 363
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = -2
Query: 146 RPRLQHGPPRVEPPRSNYTFAGAPFPPRAEVATPPVIGS 30
R RL+ G R+ P R + + A P PP ATPP G+
Sbjct: 10 RRRLRGGGHRLLPSRPSTSAASQPPPPPPSAATPPPPGA 48
>08_02_0178 - 13853847-13854416
Length = 189
Score = 30.3 bits (65), Expect = 2.0
Identities = 20/58 (34%), Positives = 26/58 (44%)
Frame = -2
Query: 176 EAGRRVRQAARPRLQHGPPRVEPPRSNYTFAGAPFPPRAEVATPPVIGSERLRLQVPQ 3
+A RR + P LQ+ V PP + PFPP+A A G + QVPQ
Sbjct: 124 KAARRTKATTAPILQYSVGYV-PPHVHPQVMTRPFPPQAAQAPVYFAGQHQPPGQVPQ 180
>06_03_0310 -
19453047-19453160,19453240-19453338,19453441-19453513,
19453598-19453708,19453795-19453956,19454064-19454340,
19454542-19455160,19455256-19455471
Length = 556
Score = 30.3 bits (65), Expect = 2.0
Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Frame = -2
Query: 155 QAARPRLQHGP--PRVEPPRSNYTFAGAPFPPRAEVATPP 42
Q P L H P P + P A AP PPRA TPP
Sbjct: 161 QDPAPSLPHAPAPPPPQAPAPTPPQAPAPTPPRAPTPTPP 200
>02_05_0224 +
26948263-26948520,26948831-26948907,26949597-26949658,
26949797-26949915,26950326-26950493,26950587-26950619
Length = 238
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/43 (34%), Positives = 17/43 (39%)
Frame = -2
Query: 164 RVRQAARPRLQHGPPRVEPPRSNYTFAGAPFPPRAEVATPPVI 36
R A P PPR P GAP PPR A P++
Sbjct: 16 RTAAALSPFSSSAPPRHSPRILRAIPVGAPHPPRVSAAVSPLV 58
>06_03_1501 +
30612643-30613310,30613396-30613501,30613732-30613934,
30614211-30614502
Length = 422
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +3
Query: 177 RTVEAVRPVLADWVGRDRGCLTFRLTQMLTGHGCFGRYLHKIAGREPTA 323
+ VE + LADWV + G T TG C+G L + ++P+A
Sbjct: 190 KNVEMLSEHLADWVSEEDGKKIVFHTFSNTGWLCYGVILENLQRQDPSA 238
>04_03_0884 + 20543084-20543638
Length = 184
Score = 29.5 bits (63), Expect = 3.6
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -2
Query: 128 GPPRVEPPRSNYTFAGAPFPPRAEVA 51
GP + PPRS + A AP PP+ ++A
Sbjct: 10 GPMAMAPPRSGHATAAAPPPPQHKMA 35
>03_02_0254 +
6862762-6863663,6863994-6864241,6864323-6864465,
6864532-6864570,6865403-6865501
Length = 476
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +2
Query: 266 RPWLFRPVLAQDSRKGTDGAVPPLRGPRRGRHSGTHAGAL 385
+P + RP +A G GA+P LRG + R SG A L
Sbjct: 8 KPAIHRPSVAAARGGGNGGAIPLLRGWQAFRRSGAPARLL 47
>11_01_0315 -
2347254-2347345,2347485-2347895,2348182-2349633,
2349688-2350045,2350818-2351177,2351321-2351419,
2351856-2351948,2352078-2352215,2352389-2352476,
2352682-2352770,2353113-2353178,2353370-2353481,
2354702-2354901
Length = 1185
Score = 28.7 bits (61), Expect = 6.2
Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
Frame = -2
Query: 236 ASAVAAHPVRENRADRLDGSEAGRRVRQA-ARPRLQHGPPRVEPPR--SNYTFAGAPFPP 66
A AV HP + A S R R++ R+EPPR S+ F +P PP
Sbjct: 422 AVAVFPHPPSQRAAAAAGASRVPAIASSPRGRRRIEGSGRRIEPPRPPSHRGFRPSPPPP 481
Query: 65 RAEVATPPV 39
+PP+
Sbjct: 482 GVAYNSPPL 490
>09_04_0379 - 17094540-17094868,17095354-17095717
Length = 230
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -3
Query: 253 VSRKVRHPRSRPTQSARTGRTASTVRRPADG 161
+ R++RH +PT AR G + +PA G
Sbjct: 179 IPRRIRHDLEKPTDGARAGGRKRGIGKPAFG 209
>09_01_0066 -
978018-978500,978588-979034,979113-979412,979521-979855,
980325-980703
Length = 647
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 406 APPSSRSLERTSRCRASWLRCSAATR 483
+PP+ +L R RCR LRC A R
Sbjct: 65 SPPTGAALYRARRCRRKLLRCRARHR 90
>07_03_1285 +
25477542-25477625,25477776-25477832,25477973-25478040,
25478187-25478391,25478429-25478586,25478865-25478940,
25479065-25479124,25479186-25479236,25479663-25479741,
25480183-25480271
Length = 308
Score = 28.7 bits (61), Expect = 6.2
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 6/73 (8%)
Frame = -3
Query: 325 CAVGSLPAILCKYRPKQPWPVSICVSRKVRHPR------SRPTQSARTGRTASTVRRPAD 164
C G +P +C+ +P PV CV H + S QS + +ST ++ A+
Sbjct: 118 CKCG-MPLCICEAPKPEPVPVKFCVPPPNEHMQQSISTTSSSAQSNPRPKKSSTNQQSAE 176
Query: 163 GSAKRRDHASSTD 125
S K+ SS++
Sbjct: 177 SSVKKASATSSSN 189
>03_05_1045 -
29914581-29914829,29914840-29916083,29919055-29919199,
29919727-29919792,29919882-29920108,29920204-29920310,
29920428-29920502,29920600-29920688,29920768-29920848,
29921631-29921702,29922056-29922178
Length = 825
Score = 28.7 bits (61), Expect = 6.2
Identities = 18/43 (41%), Positives = 20/43 (46%)
Frame = +2
Query: 365 GTHAGALLWIRRATRRPRRGHWRGPLAAARRGYDARQRRVLEG 493
G G R+A RRPRRG A R DAR+ R L G
Sbjct: 723 GAGGGGRRRARQARRRPRRGRLSNIYLDANRKDDARRVRKLIG 765
>02_01_0189 - 1273313-1274157,1274595-1275549
Length = 599
Score = 28.7 bits (61), Expect = 6.2
Identities = 21/64 (32%), Positives = 23/64 (35%)
Frame = +3
Query: 303 AGREPTAQCHHCADRDEEDTAEHTLARCSGFDEQRAALVAVIGEDLSLPRVVATMLGSDA 482
AG P A HCA T + A RAA A + L RVVA S
Sbjct: 28 AGASPPADPVHCASGTARCTVTNAYAAFPDRSTCRAAAAAYPASEEELLRVVAAAAASGT 87
Query: 483 SWKA 494
KA
Sbjct: 88 KMKA 91
>07_01_0217 +
1620625-1621419,1621982-1622152,1622581-1622865,
1623113-1623262
Length = 466
Score = 28.3 bits (60), Expect = 8.2
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = -2
Query: 260 HLR*PEGEASAVAAHPVRENRADRLDGSEAGRRVRQAARPRLQ 132
HLR P G A A A ++ R+DG E GR V PRL+
Sbjct: 106 HLRPPPGGAFAALATATIQSC--RVDGGELGRLVSSPQCPRLE 146
>04_03_1028 -
21827961-21827972,21828018-21828112,21828286-21828361,
21828921-21829037,21829532-21829621,21830011-21830056,
21831407-21831502,21831599-21832008
Length = 313
Score = 28.3 bits (60), Expect = 8.2
Identities = 24/75 (32%), Positives = 28/75 (37%)
Frame = +2
Query: 254 ADAYRPWLFRPVLAQDSRKGTDGAVPPLRGPRRGRHSGTHAGALLWIRRATRRPRRGHWR 433
A A P P A PPL PR+ R S T + R +R PRRG R
Sbjct: 19 AAAADPAAAAPAAAATDPAAAGSPSPPLP-PRKRRLSPTPSPTRRSSRSRSRSPRRGRSR 77
Query: 434 GPLAAARRGYDARQR 478
+ RG A R
Sbjct: 78 SRSRSRSRGRSASPR 92
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,175,726
Number of Sequences: 37544
Number of extensions: 418029
Number of successful extensions: 2424
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 2222
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2411
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2373961368
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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